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The map label for this gene is ybaB [C]

Identifier: 108757583

GI number: 108757583

Start: 2265589

End: 2265906

Strand: Reverse

Name: ybaB [C]

Synonym: MXAN_1931

Alternate gene names: 108757583

Gene position: 2265906-2265589 (Counterclockwise)

Preceding gene: 108761627

Following gene: 108758594

Centisome position: 24.79

GC content: 62.89

Gene sequence:

>318_bases
ATGCCTGGCGTCGACCTGAACTACTTCATCCGGCAGGCGAACAAGCTGACGGAGAAGATTGAAGAACGGAAGCAGCAGCT
GGCGGAAGAGAGCGTGGAGGCCAAGGCCGGTGACGGCCGGGTCACCGTCGTCGCCAACGGCATCCAGGAGATCCGCAGCA
TCAAGATCGACAAGGAAGCCATCGACCCCAACGACACGTCGATGCTCGAGGACCTCATCACCGCCGCGGTGAACGCCGCC
CTGGCGAGCAGCCGTCAGCACATGCAGCGCGAGCTCGCGAAAATCTCCGGCGGCGTCAAGATCCCCGGCATTACCTGA

Upstream 100 bases:

>100_bases
GCCTGACAACCGCCTCGCGCAACGGTAGGGTGGCGCCCCATTCCACGCCGGGGCGGGGCCATGTCCGTGGCGCCCGCTCC
CACGAGTACCGAGGAAGCAT

Downstream 100 bases:

>100_bases
TACCGGATGACCCCCGATCCGCTGAATCGACTCGTCGCCCAGCTCGCGAAGCTGCCGGGCATCGGCGAGAAGACCGCGCA
GCGCCTCGCGTTCCACATCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MPGVDLNYFIRQANKLTEKIEERKQQLAEESVEAKAGDGRVTVVANGIQEIRSIKIDKEAIDPNDTSMLEDLITAAVNAA
LASSRQHMQRELAKISGGVKIPGIT

Sequences:

>Translated_105_residues
MPGVDLNYFIRQANKLTEKIEERKQQLAEESVEAKAGDGRVTVVANGIQEIRSIKIDKEAIDPNDTSMLEDLITAAVNAA
LASSRQHMQRELAKISGGVKIPGIT
>Mature_104_residues
PGVDLNYFIRQANKLTEKIEERKQQLAEESVEAKAGDGRVTVVANGIQEIRSIKIDKEAIDPNDTSMLEDLITAAVNAAL
ASSRQHMQRELAKISGGVKIPGIT

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=97, Percent_Identity=30.9278350515464, Blast_Score=59, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1931_MYXXD (Q1DAZ8)

Other databases:

- EMBL:   CP000113
- RefSeq:   YP_630175.1
- ProteinModelPortal:   Q1DAZ8
- SMR:   Q1DAZ8
- STRING:   Q1DAZ8
- GeneID:   4105244
- GenomeReviews:   CP000113_GR
- KEGG:   mxa:MXAN_1931
- TIGR:   MXAN_1931
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   NDAYEET
- BioCyc:   MXAN246197:MXAN_1931-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11445; Mature: 11314

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGVDLNYFIRQANKLTEKIEERKQQLAEESVEAKAGDGRVTVVANGIQEIRSIKIDKEA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCHHH
IDPNDTSMLEDLITAAVNAALASSRQHMQRELAKISGGVKIPGIT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PGVDLNYFIRQANKLTEKIEERKQQLAEESVEAKAGDGRVTVVANGIQEIRSIKIDKEA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCHHH
IDPNDTSMLEDLITAAVNAALASSRQHMQRELAKISGGVKIPGIT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA