| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757573
Identifier: 108757573
GI number: 108757573
Start: 3553
End: 3990
Strand: Reverse
Name: 108757573
Synonym: MXAN_0003
Alternate gene names: NA
Gene position: 3990-3553 (Counterclockwise)
Preceding gene: 108762107
Following gene: NA
Centisome position: 0.04
GC content: 63.93
Gene sequence:
>438_bases GTGATGCGGAAGGTACAAGACGTGATGACGAAGGACGTCACGGTCATCAACGCGAAGGATTCATTGAAGGACGCCGCGTT GAAGATGCGCGAGCTGAGCGTGGGCCCGCTGCCCGTGTGTGATGGTGACCGGCTGATGGGCATCATCACCGACCGCGACA TCGTGGTGCGTGCGGTGTCCCAGGGAAAGGACCCCAACAGCACGACGGTGGCGGAGGCGATGACGGGGCAGCTCGAATAC GCCTTCGATGACGAGGACATCTCCGTGGTGGCGGAGAAGATGAAGGAGAAGAAGGTCCGCCGCATCCTCGCGCTCGACCG GGACAAGAAGCTGGTGGGGATTGTCGCGATGGGCGACTTGCTGGAGGCGCTGGCGGAGGAGGACGTCGGCGAGACCCTGG AGAGCATCTCCGAGGCCCCTCCCCCCGCTGCGCACTGA
Upstream 100 bases:
>100_bases TCACATCAGCGAGGGCGAGGCCGACGACGTCATGGGCCAGCTCCCCGCAGACCTGCGCTCGTTGTGGGTGCCCGAGGCCT GAACCCAAGGAAGGAGCCGT
Downstream 100 bases:
>100_bases GCGTGCCTTCCGCACTGCTTCCGTGAATGCTCGCGGGACTGATGCGGGTCGTCATGGGCCGTCGCCGCAAGGACGCGTAG CGCTTCGAAGTGGAACGGAT
Product: CBS domain-containing protein
Products: NA
Alternate protein names: HRP1 [H]
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MMRKVQDVMTKDVTVINAKDSLKDAALKMRELSVGPLPVCDGDRLMGIITDRDIVVRAVSQGKDPNSTTVAEAMTGQLEY AFDDEDISVVAEKMKEKKVRRILALDRDKKLVGIVAMGDLLEALAEEDVGETLESISEAPPPAAH
Sequences:
>Translated_145_residues MMRKVQDVMTKDVTVINAKDSLKDAALKMRELSVGPLPVCDGDRLMGIITDRDIVVRAVSQGKDPNSTTVAEAMTGQLEY AFDDEDISVVAEKMKEKKVRRILALDRDKKLVGIVAMGDLLEALAEEDVGETLESISEAPPPAAH >Mature_145_residues MMRKVQDVMTKDVTVINAKDSLKDAALKMRELSVGPLPVCDGDRLMGIITDRDIVVRAVSQGKDPNSTTVAEAMTGQLEY AFDDEDISVVAEKMKEKKVRRILALDRDKKLVGIVAMGDLLEALAEEDVGETLESISEAPPPAAH
Specific function: Unlike some other CBS-domain containing proteins does not seem to bind AMP [H]
COG id: COG0517
COG function: function code R; FOG: CBS domain
Gene ontology:
Cell location: Secreted. Note=Not seen to be associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 15794; Mature: 15794
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRKVQDVMTKDVTVINAKDSLKDAALKMRELSVGPLPVCDGDRLMGIITDRDIVVRAVS CCHHHHHHHHHCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHH QGKDPNSTTVAEAMTGQLEYAFDDEDISVVAEKMKEKKVRRILALDRDKKLVGIVAMGDL CCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH LEALAEEDVGETLESISEAPPPAAH HHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MMRKVQDVMTKDVTVINAKDSLKDAALKMRELSVGPLPVCDGDRLMGIITDRDIVVRAVS CCHHHHHHHHHCEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCHHHHHHHH QGKDPNSTTVAEAMTGQLEYAFDDEDISVVAEKMKEKKVRRILALDRDKKLVGIVAMGDL CCCCCCCHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHH LEALAEEDVGETLESISEAPPPAAH HHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]