| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is trxB [C]
Identifier: 108757522
GI number: 108757522
Start: 7032422
End: 7032808
Strand: Reverse
Name: trxB [C]
Synonym: MXAN_5670
Alternate gene names: 108757522
Gene position: 7032808-7032422 (Counterclockwise)
Preceding gene: 108759876
Following gene: 108761076
Centisome position: 76.95
GC content: 63.05
Gene sequence:
>387_bases ATGGCAACCATCGACATCACCAAAGCCAACTTCAAGGAAATCGTCTCGAAGGAGGGAATCGTCCTCCTCGACTGGTGGGC CGAGTGGTGCGCACCGTGCCGCACCTTCTCGCCTGTGTTCGAACAGGCGAGCACGAAGAATCCGGACCTCGTCTTCGGCA AGCTCGACACCGACGCAGAGGTGGAACTCGCGGGGGCTTTCGCCATCCGCTCCATCCCCACGCTGATGGTCTTCCGTGAC GGCATCATGTTGTTCGAACAGGCGGGAGCGCTGCCGGCCAACGCGCTGGATGACCTCATCCGCCAGGTGCGCGCGCTCGA CATGAACGAGGTGCGCAAACAACTGGTGGATCGCCAGGCACAGCAGGGCGCGCCGTCCCAGGCCTGA
Upstream 100 bases:
>100_bases GCGCTGTGCTGGAGGTGACTGGGAGTCGGGCCCTGGGGGGAGCCTGGCTGGCCACATCCTGACACTGGCGCCTCCGGGGG GGAGGGCCCAGTGTCAGGGC
Downstream 100 bases:
>100_bases GTCGGCACGCCTCTGTGCAGCGTGAAGACGGGCGGGGCCTCTCGGGGGGAGAGGTCTTCCGCCACGTCTTCGTTTCAGCT CAAGACCTGCACCTTGCCGT
Product: thioredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MATIDITKANFKEIVSKEGIVLLDWWAEWCAPCRTFSPVFEQASTKNPDLVFGKLDTDAEVELAGAFAIRSIPTLMVFRD GIMLFEQAGALPANALDDLIRQVRALDMNEVRKQLVDRQAQQGAPSQA
Sequences:
>Translated_128_residues MATIDITKANFKEIVSKEGIVLLDWWAEWCAPCRTFSPVFEQASTKNPDLVFGKLDTDAEVELAGAFAIRSIPTLMVFRD GIMLFEQAGALPANALDDLIRQVRALDMNEVRKQLVDRQAQQGAPSQA >Mature_127_residues ATIDITKANFKEIVSKEGIVLLDWWAEWCAPCRTFSPVFEQASTKNPDLVFGKLDTDAEVELAGAFAIRSIPTLMVFRDG IMLFEQAGALPANALDDLIRQVRALDMNEVRKQLVDRQAQQGAPSQA
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI4758304, Length=83, Percent_Identity=37.3493975903614, Blast_Score=69, Evalue=1e-12, Organism=Homo sapiens, GI52487191, Length=111, Percent_Identity=31.5315315315315, Blast_Score=66, Evalue=9e-12, Organism=Escherichia coli, GI1788936, Length=100, Percent_Identity=37, Blast_Score=80, Evalue=5e-17, Organism=Escherichia coli, GI87082331, Length=99, Percent_Identity=32.3232323232323, Blast_Score=68, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193209454, Length=82, Percent_Identity=34.1463414634146, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI32566189, Length=82, Percent_Identity=34.1463414634146, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17569137, Length=82, Percent_Identity=34.1463414634146, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17507915, Length=104, Percent_Identity=26.9230769230769, Blast_Score=62, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323072, Length=93, Percent_Identity=32.258064516129, Blast_Score=65, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 14196; Mature: 14065
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIDITKANFKEIVSKEGIVLLDWWAEWCAPCRTFSPVFEQASTKNPDLVFGKLDTDAE CCEECCCHHHHHHHHCCCCEEEEECHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCCCC VELAGAFAIRSIPTLMVFRDGIMLFEQAGALPANALDDLIRQVRALDMNEVRKQLVDRQA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH QQGAPSQA HCCCCCCC >Mature Secondary Structure ATIDITKANFKEIVSKEGIVLLDWWAEWCAPCRTFSPVFEQASTKNPDLVFGKLDTDAE CEECCCHHHHHHHHCCCCEEEEECHHHHHHHHCHHHHHHHHHCCCCCCEEEEECCCCCC VELAGAFAIRSIPTLMVFRDGIMLFEQAGALPANALDDLIRQVRALDMNEVRKQLVDRQA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH QQGAPSQA HCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8652661 [H]