| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757518
Identifier: 108757518
GI number: 108757518
Start: 3892081
End: 3892659
Strand: Direct
Name: 108757518
Synonym: MXAN_3347
Alternate gene names: NA
Gene position: 3892081-3892659 (Clockwise)
Preceding gene: 108758722
Following gene: 108761220
Centisome position: 42.58
GC content: 65.46
Gene sequence:
>579_bases GTGCTTGTCCTCAACCGGTACTACCAGCCGGTGCATGTCACCTCGGTGAAGCGGGCGTTCTCGCTCCTGTACCTGGGGGT GGCCAAGGCCATCGACTCGCAGTACCGGCTCTACGAGTTCGCGGATTGGGCAGAGCTGAGCGCGACACAGGACTGCATCA CCACCATCGAGCGCACCATCCGCGTTCCCCGTGTCCTGGTGCTCAGCGCGTATGACCATCTGCCCCGAGGGCGGGTGCGC TTCTCCCGGCTCAACATCTACGCGCGTGACAACGACACCTGCCAGTACTGCGGCAAGAACCTGCCGCGCAGCGAGCTGAA CCTGGACCACGTCATGCCGCGCACGCAGGGCGGCAAGACGACGTGGGAGAACGTGGTGTGCTCCTGCGTGCCTTGCAACC TGAGGAAGGGTGGGCGCACGCCGGAGCAGGCCCACATGAAGCTGCTCAAGAAGCCCGTGCGCCCGCGCTGGACGCCGCTG TTCCGCGGCGCCACCCGCAAGGTGACGTATCAGGAGTGGCTACCGTTCCTGCACCTGGCGGATGCGTCGTACTGGAACGT CGAGCTGCTCGACGAGTAG
Upstream 100 bases:
>100_bases TGCTCCTCGACGTCCGGTGTCTCGAGGAGGAGGAGCTCCAGGCCGTCGCGGATGCCGTCGCGGCCGCCATTCCAGGGAAC CCGCCATGATCAACAGCGCC
Downstream 100 bases:
>100_bases CGCCTGCCTGGTGGGCATCCGGGCTCACCGCAGGGGCTGGAAACACCGGGAGTGACGGGTTTCCGGCGCATGCGCGGGCC GGGATGCTCCACTGAACGGA
Product: HNH endonuclease domain-containing protein
Products: NA
Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTIRVPRVLVLSAYDHLPRGRVR FSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKTTWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPL FRGATRKVTYQEWLPFLHLADASYWNVELLDE
Sequences:
>Translated_192_residues MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTIRVPRVLVLSAYDHLPRGRVR FSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKTTWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPL FRGATRKVTYQEWLPFLHLADASYWNVELLDE >Mature_192_residues MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTIRVPRVLVLSAYDHLPRGRVR FSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKTTWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPL FRGATRKVTYQEWLPFLHLADASYWNVELLDE
Specific function: Unknown
COG id: COG1403
COG function: function code V; Restriction endonuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22374; Mature: 22374
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTI CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHH RVPRVLVLSAYDHLPRGRVRFSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKT CCCHHEEEHHHHCCCCCCEEEEEEEEEECCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCC TWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPLFRGATRKVTYQEWLPFLHLA CHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCEEEHHHHCCHHEEC DASYWNVELLDE CCCEEEEEEECC >Mature Secondary Structure MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTI CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHH RVPRVLVLSAYDHLPRGRVRFSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKT CCCHHEEEHHHHCCCCCCEEEEEEEEEECCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCC TWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPLFRGATRKVTYQEWLPFLHLA CHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCEEEHHHHCCHHEEC DASYWNVELLDE CCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA