Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108757518

Identifier: 108757518

GI number: 108757518

Start: 3892081

End: 3892659

Strand: Direct

Name: 108757518

Synonym: MXAN_3347

Alternate gene names: NA

Gene position: 3892081-3892659 (Clockwise)

Preceding gene: 108758722

Following gene: 108761220

Centisome position: 42.58

GC content: 65.46

Gene sequence:

>579_bases
GTGCTTGTCCTCAACCGGTACTACCAGCCGGTGCATGTCACCTCGGTGAAGCGGGCGTTCTCGCTCCTGTACCTGGGGGT
GGCCAAGGCCATCGACTCGCAGTACCGGCTCTACGAGTTCGCGGATTGGGCAGAGCTGAGCGCGACACAGGACTGCATCA
CCACCATCGAGCGCACCATCCGCGTTCCCCGTGTCCTGGTGCTCAGCGCGTATGACCATCTGCCCCGAGGGCGGGTGCGC
TTCTCCCGGCTCAACATCTACGCGCGTGACAACGACACCTGCCAGTACTGCGGCAAGAACCTGCCGCGCAGCGAGCTGAA
CCTGGACCACGTCATGCCGCGCACGCAGGGCGGCAAGACGACGTGGGAGAACGTGGTGTGCTCCTGCGTGCCTTGCAACC
TGAGGAAGGGTGGGCGCACGCCGGAGCAGGCCCACATGAAGCTGCTCAAGAAGCCCGTGCGCCCGCGCTGGACGCCGCTG
TTCCGCGGCGCCACCCGCAAGGTGACGTATCAGGAGTGGCTACCGTTCCTGCACCTGGCGGATGCGTCGTACTGGAACGT
CGAGCTGCTCGACGAGTAG

Upstream 100 bases:

>100_bases
TGCTCCTCGACGTCCGGTGTCTCGAGGAGGAGGAGCTCCAGGCCGTCGCGGATGCCGTCGCGGCCGCCATTCCAGGGAAC
CCGCCATGATCAACAGCGCC

Downstream 100 bases:

>100_bases
CGCCTGCCTGGTGGGCATCCGGGCTCACCGCAGGGGCTGGAAACACCGGGAGTGACGGGTTTCCGGCGCATGCGCGGGCC
GGGATGCTCCACTGAACGGA

Product: HNH endonuclease domain-containing protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; Restriction Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTIRVPRVLVLSAYDHLPRGRVR
FSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKTTWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPL
FRGATRKVTYQEWLPFLHLADASYWNVELLDE

Sequences:

>Translated_192_residues
MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTIRVPRVLVLSAYDHLPRGRVR
FSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKTTWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPL
FRGATRKVTYQEWLPFLHLADASYWNVELLDE
>Mature_192_residues
MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTIRVPRVLVLSAYDHLPRGRVR
FSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKTTWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPL
FRGATRKVTYQEWLPFLHLADASYWNVELLDE

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22374; Mature: 22374

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTI
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHH
RVPRVLVLSAYDHLPRGRVRFSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKT
CCCHHEEEHHHHCCCCCCEEEEEEEEEECCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCC
TWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPLFRGATRKVTYQEWLPFLHLA
CHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCEEEHHHHCCHHEEC
DASYWNVELLDE
CCCEEEEEEECC
>Mature Secondary Structure
MLVLNRYYQPVHVTSVKRAFSLLYLGVAKAIDSQYRLYEFADWAELSATQDCITTIERTI
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCHHHHHHHHHHHHHHHHHH
RVPRVLVLSAYDHLPRGRVRFSRLNIYARDNDTCQYCGKNLPRSELNLDHVMPRTQGGKT
CCCHHEEEHHHHCCCCCCEEEEEEEEEECCCCHHHHHCCCCCCCCCCHHHCCCCCCCCCC
TWENVVCSCVPCNLRKGGRTPEQAHMKLLKKPVRPRWTPLFRGATRKVTYQEWLPFLHLA
CHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHCCCCCEEEHHHHCCHHEEC
DASYWNVELLDE
CCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA