Click here to switch to the map view.

The map label for this gene is 108757484

Identifier: 108757484

GI number: 108757484

Start: 2026147

End: 2027040

Strand: Reverse

Name: 108757484

Synonym: MXAN_1709

Alternate gene names: NA

Gene position: 2027040-2026147 (Counterclockwise)

Preceding gene: 108763079

Following gene: 108758261

Centisome position: 22.18

GC content: 67.23

Gene sequence:

>894_bases
ATGAGTGACGAACAGCGAACAGGCTCCCTGGCGGCGCTGCTGCGGGCATACGTGTCTCCGAAGCTGCGGGCGGAGCTGGA
GGCCGAGGAGGGATTCGAGGCGCTGCTGGACAAACACGTCGAGGCAGCACGGACCCAGTGGCCCACGTTGTCACTCCCGG
CAGAGACCTTCGTGAGGCACCTGGCCCGGCACCTGCCTGAGGGAAAGGCCGCGGAGGTGATGCGCATCCTCCAAGGTGCC
GACCTGTATCTGGCGTGCGCCTGCACCACCGGGGATCCGGCGGCCCTCAAGGCCTTCGAACAACACATCCTCCGGCACGT
CCCACCCCGGCTCGGGAAGGTGTCGCCGCCCCTGGTGGAGGAAGTGCTGCAGATGCTGCGCGAACGGCTGCTGGTGGGCA
GCAGCAACACGCCACCGAGGATTGCGAGCTATGGGGGGCGAGGGCCCCTGCGGACCTGGGTGAGCATCGTCGCCGCACGC
ATCGCCTCGGAGTTGATGGGCCAGGACGAGCGCCATCAGCTCGTCGCGGAACCTCCCGAGGAACTCGCGCGGATGCTGGC
CCCGAGCGACCCCGAGTACGCGCTGCTGCGCGAAGATGCACGCCAACTCCTCGTCGAGTCGCTCCGAAAAGCGGTGGCGG
TGCTCTCCGAGCAGGAGCGGACCCTGCTGCGCTTGCACCATTTCCATGGGTTCACGATGGACCGGCTGACGCTCATGTAC
GGAGGCTCGCGCTCCGGCGTCGCGCGCAAGGTCGCCGATGCCCGCGAGCAGTTGCTCGAGCGCGTTCGCATGGAGCTCGC
GCCAAGAATGAAGCAGGACCAACTCGCCCTGGAGAGCCTCCTGGGACTGGTCAGCAGCCGACTGGATATCAGCCTCCTGG
GATTGCTGGACTGA

Upstream 100 bases:

>100_bases
CGCTGGCCGAGGAGGCCCGGGCGCGGCTGGAGTCTGTGGGGGTCCGGGGCCAGTCGGAGCTCCAGACGGTGTTGGCCTGG
CAACGGCGTGAGACGAAACG

Downstream 100 bases:

>100_bases
AGCCCCTACCGCCCATCTGCCGCCGGGCGCCCGACTGCTGGCACTCCTGACGCACCGGCGTCCCGCCGACTTGCCAGGGC
AACGCCGCCGCCAGCGTCGT

Product: putative DNA-binding regulatory protein

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSDEQRTGSLAALLRAYVSPKLRAELEAEEGFEALLDKHVEAARTQWPTLSLPAETFVRHLARHLPEGKAAEVMRILQGA
DLYLACACTTGDPAALKAFEQHILRHVPPRLGKVSPPLVEEVLQMLRERLLVGSSNTPPRIASYGGRGPLRTWVSIVAAR
IASELMGQDERHQLVAEPPEELARMLAPSDPEYALLREDARQLLVESLRKAVAVLSEQERTLLRLHHFHGFTMDRLTLMY
GGSRSGVARKVADAREQLLERVRMELAPRMKQDQLALESLLGLVSSRLDISLLGLLD

Sequences:

>Translated_297_residues
MSDEQRTGSLAALLRAYVSPKLRAELEAEEGFEALLDKHVEAARTQWPTLSLPAETFVRHLARHLPEGKAAEVMRILQGA
DLYLACACTTGDPAALKAFEQHILRHVPPRLGKVSPPLVEEVLQMLRERLLVGSSNTPPRIASYGGRGPLRTWVSIVAAR
IASELMGQDERHQLVAEPPEELARMLAPSDPEYALLREDARQLLVESLRKAVAVLSEQERTLLRLHHFHGFTMDRLTLMY
GGSRSGVARKVADAREQLLERVRMELAPRMKQDQLALESLLGLVSSRLDISLLGLLD
>Mature_296_residues
SDEQRTGSLAALLRAYVSPKLRAELEAEEGFEALLDKHVEAARTQWPTLSLPAETFVRHLARHLPEGKAAEVMRILQGAD
LYLACACTTGDPAALKAFEQHILRHVPPRLGKVSPPLVEEVLQMLRERLLVGSSNTPPRIASYGGRGPLRTWVSIVAARI
ASELMGQDERHQLVAEPPEELARMLAPSDPEYALLREDARQLLVESLRKAVAVLSEQERTLLRLHHFHGFTMDRLTLMYG
GSRSGVARKVADAREQLLERVRMELAPRMKQDQLALESLLGLVSSRLDISLLGLLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33061; Mature: 32930

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEQRTGSLAALLRAYVSPKLRAELEAEEGFEALLDKHVEAARTQWPTLSLPAETFVRH
CCCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LARHLPEGKAAEVMRILQGADLYLACACTTGDPAALKAFEQHILRHVPPRLGKVSPPLVE
HHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHH
EVLQMLRERLLVGSSNTPPRIASYGGRGPLRTWVSIVAARIASELMGQDERHQLVAEPPE
HHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHH
ELARMLAPSDPEYALLREDARQLLVESLRKAVAVLSEQERTLLRLHHFHGFTMDRLTLMY
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
GGSRSGVARKVADAREQLLERVRMELAPRMKQDQLALESLLGLVSSRLDISLLGLLD
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure 
SDEQRTGSLAALLRAYVSPKLRAELEAEEGFEALLDKHVEAARTQWPTLSLPAETFVRH
CCCHHHHHHHHHHHHHHCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
LARHLPEGKAAEVMRILQGADLYLACACTTGDPAALKAFEQHILRHVPPRLGKVSPPLVE
HHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHH
EVLQMLRERLLVGSSNTPPRIASYGGRGPLRTWVSIVAARIASELMGQDERHQLVAEPPE
HHHHHHHHHHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCHH
ELARMLAPSDPEYALLREDARQLLVESLRKAVAVLSEQERTLLRLHHFHGFTMDRLTLMY
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
GGSRSGVARKVADAREQLLERVRMELAPRMKQDQLALESLLGLVSSRLDISLLGLLD
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA