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The map label for this gene is ycfD [C]

Identifier: 108757419

GI number: 108757419

Start: 628779

End: 630086

Strand: Reverse

Name: ycfD [C]

Synonym: MXAN_0546

Alternate gene names: 108757419

Gene position: 630086-628779 (Counterclockwise)

Preceding gene: 108762033

Following gene: 108760415

Centisome position: 6.89

GC content: 67.51

Gene sequence:

>1308_bases
ATGGCCCGCATCGACCTCCAGCGCCGGTTCGACTGGGACACCTTCGTCACGCGCTACTGGAACCAGCGGCCGGTGCTCTA
CCAGGCGACGGGCATCAATCCCTTCATGGACACGGACGTGTTCGACGCGGCGCTCGGGGCCTCGCGCGGCGCCATGGAGC
CGCCCACGGCGCTCGAGGCGCGCACGGACGTCCAGTTCACCATCGACCAGGGGCAGCCCGTCCAACTCGGGCCCTGGCTT
CCCCGCGACACCGACGGCTCGCTGGACGGCTACGACTCGCGGCTCGCGGACGCGCTGGGAACACGTCGCTACGCGCTCAT
CATCTCCCTGCTGCATTCCCACGGCTTCGGACTCTGGTCCCGCGAGCGGGCCTTCTTCTCCGACCTCTGGCGGCGCGTGG
GGCTGCCCCTGTCAGGCGGCATCACCACGCTGTTCCATGGGAACTACGAGCACAGTCCGGTGGGCGTCCACCTGGACCGC
TTCACCACGTTCCTCTTCGCCATCCGGGGCCGCAAGCGGATGCGCTTCTGGGCCAAGCGTCCCTGGAGCATGCCCGTCAC
CACCCTGGTGGACTACGCGCCCTATCTGGCGAAGTCCTTCACCGCGGAGGTGGGGCCCGGCGACATCCTCTACTGGCCCG
CCAGCTACTACCACGTCGGAGAGAGCGCGAGCCGGGACGTCGCCACCAGCGTCAACGTGGGCATCCCCGTCACCGGACAC
CAGGCCCGCTATGACGTGGAGGACCTCGTGGGCCCAGGCCACAGCAACGCACCACGCACTCGCGACACGGTGCGTGGCCG
TGCGCTGGTACCGGGCGTGCTCGACGGCGACGGCGTGCTGCCGCGTGAGCTGCCCGCCGCCCTGCGGCAGGCCGCAAACA
CCTTGCGCGAAAACAGCCGTGACGCACGAACGCAGGCCCACATCCGCACCCTGTGGCTCAACCGGCGCTCCGCGGGCGGC
CTCGAGCCCCCACCACCTCCCGCGAGACGGCGGCCCCTCAAGGACACAGACATTCTTCACGGGAATAAAAGTTTCCCCAT
CCTGCTGGAGAAAACAGGAACGGGTTGGTGTTGCTCAGCCAATGGCAACGCATTGCATGTTTCAGGCCTTCGGCAGCCGG
TGAATAAACTTGTCGCGACATTGAACACGGCGCGCACGGTAAGCGTGGGTGAACTCTTGCACCCCTTCCCCTCGCGAGGC
GACCTGCCGCTCCGCGCCTTGAAACCGCTGCCCGCGACGCGGGCGGGCATGCGTCGGATGCTGGAAATTCTACTGACATT
TCGAGCCATCCAACTGGCAGGCCGATGA

Upstream 100 bases:

>100_bases
GGGGCGAGGCGCGTCCCAACGCGAGCAGGTGCGGGCCTTGCTGGAAACCCTTCATGCGCTGCGCGGTATCGAGCGCGTGC
CGTCGAAGGAGGCATGACGG

Downstream 100 bases:

>100_bases
CGTAGCCAGCAAAGACATCTCAACTTGACTCAAGCGAATTACACACTTTACCATGCTTGAGCTGTCTGACCCCAACGTGT
GGAGGATTCCCATGGTGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MARIDLQRRFDWDTFVTRYWNQRPVLYQATGINPFMDTDVFDAALGASRGAMEPPTALEARTDVQFTIDQGQPVQLGPWL
PRDTDGSLDGYDSRLADALGTRRYALIISLLHSHGFGLWSRERAFFSDLWRRVGLPLSGGITTLFHGNYEHSPVGVHLDR
FTTFLFAIRGRKRMRFWAKRPWSMPVTTLVDYAPYLAKSFTAEVGPGDILYWPASYYHVGESASRDVATSVNVGIPVTGH
QARYDVEDLVGPGHSNAPRTRDTVRGRALVPGVLDGDGVLPRELPAALRQAANTLRENSRDARTQAHIRTLWLNRRSAGG
LEPPPPPARRRPLKDTDILHGNKSFPILLEKTGTGWCCSANGNALHVSGLRQPVNKLVATLNTARTVSVGELLHPFPSRG
DLPLRALKPLPATRAGMRRMLEILLTFRAIQLAGR

Sequences:

>Translated_435_residues
MARIDLQRRFDWDTFVTRYWNQRPVLYQATGINPFMDTDVFDAALGASRGAMEPPTALEARTDVQFTIDQGQPVQLGPWL
PRDTDGSLDGYDSRLADALGTRRYALIISLLHSHGFGLWSRERAFFSDLWRRVGLPLSGGITTLFHGNYEHSPVGVHLDR
FTTFLFAIRGRKRMRFWAKRPWSMPVTTLVDYAPYLAKSFTAEVGPGDILYWPASYYHVGESASRDVATSVNVGIPVTGH
QARYDVEDLVGPGHSNAPRTRDTVRGRALVPGVLDGDGVLPRELPAALRQAANTLRENSRDARTQAHIRTLWLNRRSAGG
LEPPPPPARRRPLKDTDILHGNKSFPILLEKTGTGWCCSANGNALHVSGLRQPVNKLVATLNTARTVSVGELLHPFPSRG
DLPLRALKPLPATRAGMRRMLEILLTFRAIQLAGR
>Mature_434_residues
ARIDLQRRFDWDTFVTRYWNQRPVLYQATGINPFMDTDVFDAALGASRGAMEPPTALEARTDVQFTIDQGQPVQLGPWLP
RDTDGSLDGYDSRLADALGTRRYALIISLLHSHGFGLWSRERAFFSDLWRRVGLPLSGGITTLFHGNYEHSPVGVHLDRF
TTFLFAIRGRKRMRFWAKRPWSMPVTTLVDYAPYLAKSFTAEVGPGDILYWPASYYHVGESASRDVATSVNVGIPVTGHQ
ARYDVEDLVGPGHSNAPRTRDTVRGRALVPGVLDGDGVLPRELPAALRQAANTLRENSRDARTQAHIRTLWLNRRSAGGL
EPPPPPARRRPLKDTDILHGNKSFPILLEKTGTGWCCSANGNALHVSGLRQPVNKLVATLNTARTVSVGELLHPFPSRGD
LPLRALKPLPATRAGMRRMLEILLTFRAIQLAGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48393; Mature: 48262

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIDLQRRFDWDTFVTRYWNQRPVLYQATGINPFMDTDVFDAALGASRGAMEPPTALEA
CCCCCCHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
RTDVQFTIDQGQPVQLGPWLPRDTDGSLDGYDSRLADALGTRRYALIISLLHSHGFGLWS
CCCEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH
RERAFFSDLWRRVGLPLSGGITTLFHGNYEHSPVGVHLDRFTTFLFAIRGRKRMRFWAKR
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHCC
PWSMPVTTLVDYAPYLAKSFTAEVGPGDILYWPASYYHVGESASRDVATSVNVGIPVTGH
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHEECCCCCCCCCCCCCCCCCCCCCC
QARYDVEDLVGPGHSNAPRTRDTVRGRALVPGVLDGDGVLPRELPAALRQAANTLRENSR
CCCCCHHHHCCCCCCCCCCCHHHHCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCH
DARTQAHIRTLWLNRRSAGGLEPPPPPARRRPLKDTDILHGNKSFPILLEKTGTGWCCSA
HHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCEEECC
NGNALHVSGLRQPVNKLVATLNTARTVSVGELLHPFPSRGDLPLRALKPLPATRAGMRRM
CCCEEEEHHHHHHHHHHHHHHHHHCEEEHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHH
LEILLTFRAIQLAGR
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARIDLQRRFDWDTFVTRYWNQRPVLYQATGINPFMDTDVFDAALGASRGAMEPPTALEA
CCCCCHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCCC
RTDVQFTIDQGQPVQLGPWLPRDTDGSLDGYDSRLADALGTRRYALIISLLHSHGFGLWS
CCCEEEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCH
RERAFFSDLWRRVGLPLSGGITTLFHGNYEHSPVGVHLDRFTTFLFAIRGRKRMRFWAKR
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEHHHHHHHHHHHHCCHHHHHHHCC
PWSMPVTTLVDYAPYLAKSFTAEVGPGDILYWPASYYHVGESASRDVATSVNVGIPVTGH
CCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHEECCCCCCCCCCCCCCCCCCCCCC
QARYDVEDLVGPGHSNAPRTRDTVRGRALVPGVLDGDGVLPRELPAALRQAANTLRENSR
CCCCCHHHHCCCCCCCCCCCHHHHCCCEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCH
DARTQAHIRTLWLNRRSAGGLEPPPPPARRRPLKDTDILHGNKSFPILLEKTGTGWCCSA
HHHHHHHHHHEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCEEECC
NGNALHVSGLRQPVNKLVATLNTARTVSVGELLHPFPSRGDLPLRALKPLPATRAGMRRM
CCCEEEEHHHHHHHHHHHHHHHHHCEEEHHHHHCCCCCCCCCCHHHHCCCCCHHHHHHHH
LEILLTFRAIQLAGR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA