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The map label for this gene is yfiO [H]

Identifier: 108757392

GI number: 108757392

Start: 2331496

End: 2332281

Strand: Direct

Name: yfiO [H]

Synonym: MXAN_1998

Alternate gene names: 108757392

Gene position: 2331496-2332281 (Clockwise)

Preceding gene: 108756985

Following gene: 108764088

Centisome position: 25.51

GC content: 67.68

Gene sequence:

>786_bases
GTGGTGGGGATGCGTTCCGCCGTCGCCTTTCTGTCCGCCTTCCTGCTGTTCGGTACCGGGTGTGCGTCCCTCACGCAGGG
CCAGGCCGGTGAGCCTGACTATGCCGCCGTCGCAGATGAAAACCTGCGGCTCGGCTCCGAGGCCCTGGAGAACAAGGACT
TCTTCCGCGCCCAGAAATACTTCGAGTACGTCCGAACGAAGTTCCCGTACCAGGAGGCCGCCCGCGAGGCCGAGCTGAAG
CTGGCCGACGTGGACTTCGAGCGCGAAGCCTTCCCCGAGGCCAAGGAGCAGTACCAGTCCTTCATCAAGCTCCACCCCAC
GCACGCCAAGGTGGACTACGCCGCCTTCCGCTCCGCGATGACCCACGTGCGGGCCTACCCCTCCGAGTTCTTCGCCCTGC
CGCCGTCCCGCGAGAAGGACCAGGGCGAAATCCGCTCCGCGTTGGTGGCCATGGAGGAGTTCCTGCGCCAGTACCCCCAG
TCTCAGTACGTGGCGGAGGCGAAGACGCAGCGGGAGGACGCTCGGCGCCGGCTCGCCTCGCACGAACTGTACGCGGCCCA
GTTCTATCAGAAGCGTGAGCGCTGGAAGGCCGTGGCCCAGCGCCTGGAAGGGCTGCTGCGCCGCTACCCGGGCACGGAGT
ACGAGGAGGAGGCCCTCTTCGACCTGCACGACGCGTACGTGAAGCTGAATGACACGGAGAAGGCGCAGGACACGCTGCGC
CAGGTGCTGCGTCGGCTGCCGGGCACGCCCGCCGCGGAGCGCGCCCAGCGTATGCTGGGCTCGTGA

Upstream 100 bases:

>100_bases
CGCGCAGGCCGGCTCCTGGACAGCCGGGGCTTCTCGGAGGACGTCATCTACCAGTTGCTCGGAGAAGCTTCGCTGGACCC
CTCGGGGCCGGAGGAATAGC

Downstream 100 bases:

>100_bases
GAACGACCCAGGACTGGAGCCGCTTCGGTGGCGGCGTCATCGTCATCCTGGCGCTGGGCGCCACCCTGGCCTTGTTCGTT
CCACGCTTCCTGGGCGCCGC

Product: putative competence lipoprotein ComL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MVGMRSAVAFLSAFLLFGTGCASLTQGQAGEPDYAAVADENLRLGSEALENKDFFRAQKYFEYVRTKFPYQEAAREAELK
LADVDFEREAFPEAKEQYQSFIKLHPTHAKVDYAAFRSAMTHVRAYPSEFFALPPSREKDQGEIRSALVAMEEFLRQYPQ
SQYVAEAKTQREDARRRLASHELYAAQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTLR
QVLRRLPGTPAAERAQRMLGS

Sequences:

>Translated_261_residues
MVGMRSAVAFLSAFLLFGTGCASLTQGQAGEPDYAAVADENLRLGSEALENKDFFRAQKYFEYVRTKFPYQEAAREAELK
LADVDFEREAFPEAKEQYQSFIKLHPTHAKVDYAAFRSAMTHVRAYPSEFFALPPSREKDQGEIRSALVAMEEFLRQYPQ
SQYVAEAKTQREDARRRLASHELYAAQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTLR
QVLRRLPGTPAAERAQRMLGS
>Mature_261_residues
MVGMRSAVAFLSAFLLFGTGCASLTQGQAGEPDYAAVADENLRLGSEALENKDFFRAQKYFEYVRTKFPYQEAAREAELK
LADVDFEREAFPEAKEQYQSFIKLHPTHAKVDYAAFRSAMTHVRAYPSEFFALPPSREKDQGEIRSALVAMEEFLRQYPQ
SQYVAEAKTQREDARRRLASHELYAAQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTLR
QVLRRLPGTPAAERAQRMLGS

Specific function: Unknown

COG id: COG4105

COG function: function code R; DNA uptake lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0169 (ComL) family [H]

Homologues:

Organism=Escherichia coli, GI1788947, Length=239, Percent_Identity=26.7782426778243, Blast_Score=95, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017689
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30074; Mature: 30074

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGMRSAVAFLSAFLLFGTGCASLTQGQAGEPDYAAVADENLRLGSEALENKDFFRAQKY
CCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHCCCCHHCCHHHHHHHHHHHHHHH
FEYVRTKFPYQEAAREAELKLADVDFEREAFPEAKEQYQSFIKLHPTHAKVDYAAFRSAM
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
THVRAYPSEFFALPPSREKDQGEIRSALVAMEEFLRQYPQSQYVAEAKTQREDARRRLAS
HHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HELYAAQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHH
QVLRRLPGTPAAERAQRMLGS
HHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MVGMRSAVAFLSAFLLFGTGCASLTQGQAGEPDYAAVADENLRLGSEALENKDFFRAQKY
CCCHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHCCCCHHCCHHHHHHHHHHHHHHH
FEYVRTKFPYQEAAREAELKLADVDFEREAFPEAKEQYQSFIKLHPTHAKVDYAAFRSAM
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
THVRAYPSEFFALPPSREKDQGEIRSALVAMEEFLRQYPQSQYVAEAKTQREDARRRLAS
HHHHHCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
HELYAAQFYQKRERWKAVAQRLEGLLRRYPGTEYEEEALFDLHDAYVKLNDTEKAQDTLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHEECCCHHHHHHHHH
QVLRRLPGTPAAERAQRMLGS
HHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]