| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757342
Identifier: 108757342
GI number: 108757342
Start: 2420627
End: 2421496
Strand: Direct
Name: 108757342
Synonym: MXAN_2089
Alternate gene names: NA
Gene position: 2420627-2421496 (Clockwise)
Preceding gene: 108763111
Following gene: 108758220
Centisome position: 26.48
GC content: 70.34
Gene sequence:
>870_bases ATGTCCTGGTTCCTGGCGCTGTCCCTGCTCGCGGCCACGCCGGAGGGCGGCGCCGCGAAGAAGGCGGAGGACGCCGAGTC GCTGCGTCTGCGCGCCACGAAGCTCTACCGGGCGAAGAAGCTCGGCGAGGCCTGCCCCTTGTTCGAGCGCGCCGCGAAGC TCGCGCCGGAGCACGGCCCAACGCTAGCGGACCTGGGGCTGTGCCTCCAGAAGCAGGGCCGAAAAGAGCAGGCCCTGGCC GTCTACCTGCGCGCGCTCAAGGCGAGCGGCGCGGACGCCAAGACGCGCGCCAACGTCTACTTCAACCTCGCCGCGTTCCA TGACGTGACGCCTGAAGCCCTGACGCTGGAGCACCAGCCGACGCCCCGGGGCCACTACCTGGCCATCCGCGGCGCCGGGC CGTGCGCGGACCTGCCCTCCTCGGAGCCGAGCTGCGGCACCGTGCTGCAGGCGTGCCTCAGCGAATGGGTGGCGCCCGTC GAGGCTGTCTACGCGGAGACACCACCGATGTTCTACGCGGAGACGGGCTTCAACATGCACGTCAACGGGGCCGGAGCGCG GGAGGACGCGTCCGTCCCCACGCGGCGTGGAGAGGCAGGGTACTGCCCCAACGCGCCTTCGCCGGCGGATGGGGGCTCCC CGGCGGCGCGGCACTGCCTCTACTGGGAGAGCAACGAGTTGCTCGACGAGTGCCACTACAAGGAACACGTCTGCGAGTCG CAGCGGGAGCCGTGGCTGAAGAACGAAGGCAACTGCAAGTTCGTCTACGTGAACCCTTGCGAGGGCCGCGTCGCCGTCGC GTGTAAAGGCGCCCGCTTCTCACCCAAGCAGGTCTGGGTCGGCGAGGTGTGGGTGGCGCCCGTCCGCTGA
Upstream 100 bases:
>100_bases GATCGACGCGCAGCGCGGCGCGCTGTCCGAGGACGGCATCCGCCGCCGCATCGAGCGCGCGCTGAAGCAGCCCTGACGCC TGAGCACGGGGGGATTTCAC
Downstream 100 bases:
>100_bases GTGGGGCGGGCGCCTCACGGGCGCTCCGCCCCAGCTCGCGTGGACTACGGCTTGCCGTCCTTGTCCGGGGCCGCGTTGGC CGGCGTCGTTCCCGGCGGCG
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSWFLALSLLAATPEGGAAKKAEDAESLRLRATKLYRAKKLGEACPLFERAAKLAPEHGPTLADLGLCLQKQGRKEQALA VYLRALKASGADAKTRANVYFNLAAFHDVTPEALTLEHQPTPRGHYLAIRGAGPCADLPSSEPSCGTVLQACLSEWVAPV EAVYAETPPMFYAETGFNMHVNGAGAREDASVPTRRGEAGYCPNAPSPADGGSPAARHCLYWESNELLDECHYKEHVCES QREPWLKNEGNCKFVYVNPCEGRVAVACKGARFSPKQVWVGEVWVAPVR
Sequences:
>Translated_289_residues MSWFLALSLLAATPEGGAAKKAEDAESLRLRATKLYRAKKLGEACPLFERAAKLAPEHGPTLADLGLCLQKQGRKEQALA VYLRALKASGADAKTRANVYFNLAAFHDVTPEALTLEHQPTPRGHYLAIRGAGPCADLPSSEPSCGTVLQACLSEWVAPV EAVYAETPPMFYAETGFNMHVNGAGAREDASVPTRRGEAGYCPNAPSPADGGSPAARHCLYWESNELLDECHYKEHVCES QREPWLKNEGNCKFVYVNPCEGRVAVACKGARFSPKQVWVGEVWVAPVR >Mature_288_residues SWFLALSLLAATPEGGAAKKAEDAESLRLRATKLYRAKKLGEACPLFERAAKLAPEHGPTLADLGLCLQKQGRKEQALAV YLRALKASGADAKTRANVYFNLAAFHDVTPEALTLEHQPTPRGHYLAIRGAGPCADLPSSEPSCGTVLQACLSEWVAPVE AVYAETPPMFYAETGFNMHVNGAGAREDASVPTRRGEAGYCPNAPSPADGGSPAARHCLYWESNELLDECHYKEHVCESQ REPWLKNEGNCKFVYVNPCEGRVAVACKGARFSPKQVWVGEVWVAPVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31339; Mature: 31208
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWFLALSLLAATPEGGAAKKAEDAESLRLRATKLYRAKKLGEACPLFERAAKLAPEHGP CHHHHEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC TLADLGLCLQKQGRKEQALAVYLRALKASGADAKTRANVYFNLAAFHDVTPEALTLEHQP CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEECCC TPRGHYLAIRGAGPCADLPSSEPSCGTVLQACLSEWVAPVEAVYAETPPMFYAETGFNMH CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEE VNGAGAREDASVPTRRGEAGYCPNAPSPADGGSPAARHCLYWESNELLDECHYKEHVCES ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCHHHHHHHHHHHHHHHH QREPWLKNEGNCKFVYVNPCEGRVAVACKGARFSPKQVWVGEVWVAPVR HCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEECCC >Mature Secondary Structure SWFLALSLLAATPEGGAAKKAEDAESLRLRATKLYRAKKLGEACPLFERAAKLAPEHGP HHHHEEHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC TLADLGLCLQKQGRKEQALAVYLRALKASGADAKTRANVYFNLAAFHDVTPEALTLEHQP CHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCEEEECCC TPRGHYLAIRGAGPCADLPSSEPSCGTVLQACLSEWVAPVEAVYAETPPMFYAETGFNMH CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEE VNGAGAREDASVPTRRGEAGYCPNAPSPADGGSPAARHCLYWESNELLDECHYKEHVCES ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEEECCHHHHHHHHHHHHHHHH QREPWLKNEGNCKFVYVNPCEGRVAVACKGARFSPKQVWVGEVWVAPVR HCCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA