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The map label for this gene is amiC [H]

Identifier: 108757251

GI number: 108757251

Start: 4670944

End: 4672743

Strand: Reverse

Name: amiC [H]

Synonym: MXAN_3886

Alternate gene names: 108757251

Gene position: 4672743-4670944 (Counterclockwise)

Preceding gene: 108764050

Following gene: 108757343

Centisome position: 51.13

GC content: 69.44

Gene sequence:

>1800_bases
ATGCACTCGCGCCTCGTCATCGTGCTGCCCGTGCTGCTGCTGCTCGTCCCGAGCGCGGTGGGGGCCGCCAAGCGAGACGA
GGCCGAGGAGGCCTATCAGGGTGCTCGCAAGGTCTACTACGCGCTGAAGGACGACGCGGCCCGGCGCAAGCTGCGTCATC
ACTGGCTGAACGTGGTGGCGCGCTTCGAGTCCGTGGCCGCGCGCTTCCCGAAGTCGGACCGCGCGCCGGATGCCCTGTTC
ACGGCGGCGGAGATGCTCCAGGAGCTGAGCCGCATCTCCTTCGTGGAGGACGACCTCAAGGCCTCCATCACCGACTACAC
CAAGCTGCTGGAGGGCTACCCGAAGCACCGGCTGTCGGATGACGGTGCGCTGGCGCTCGCGAAGATTCACGTCCACCGGC
TGGACCAGCCGGAGTCCGCGCGCAAGGTCCTGACGGAGACGCTGGCCGTCAACAGCAAGGGTGACCGGGCTCGGGAGATG
CGGGAGCTGCTGGCCTCGCTGCCGTCGCCCAAGGCCCCGCCGCCGCCCCCTCGCAAGGCCGCGCCTGTCGTGGCGAAGAG
TGATTCCTCCGCGTCGGGCAAGACGAGCACCGCTGGCAAAGCGACCGCCATGGCCGACTCCGGCAAGAGCTCCGCGTCGG
TGGATGCCTCCGCCAAGGGCTCCGTGTCGAGCAAGGCCGTCGCTTCGGCGGAGACGTCCGCGTCCGGGAAGGGCTCCGCC
CCGGACGATACCTCCAGCGCGGGCACCAGCGACACGTCCAAGGCCGTTGCCTCGACCGACACGTCCAAGGACGCGCAGCC
GGCGCCGGCCGTGGAGGCGTCGGGGCCCGCGGAGCGGCCTTCGTCCAGCCTGGTGGCCGCCATCGAGAAGATGGCGCGCG
AGCCGTCGCCCAGGATTCCCCAGAAGGAGCCGAGCGCGCCCGTGAAGGAGGACGCGCGCGAAGGCAGCCTGGACGCGGCC
GTCGCCGCCGCCATGGCCTCGAAGCCCGCTGCCGCGGAGCCGCCGCGTCCCATCACCCGTCCGGTGGACGACAAGGTGGC
GCAGGCCCGGCTGAAGGCCGTGGCCAAGCAGTCGCGCAGCATGGAGCTGACGCTGGCGGAGCAGCTCGGCCTGAAGGTGC
GGCGCGTGGTCATCGATCCCGGCCACGGCGGTCACGACACGGGCGCCATCGGCAAGGGGGGGACGCGCGAGAAGGACGTG
GCGCTGTCCATCTCCCTCAAGCTGGCGGAGGAGCTGCGTGAGAAGGGCCTGGAGGTGGTGCTCACCCGCGACGATGACCG
GTTCATCCGCCTGGAGGACCGCGCCAAGTACGCCAACGCCGAGCACGGTGACCTGTTCATCTCCGTCCACTGCAACGCCG
CGGAGAAGCGCACGCTGCGTGGCATCGAGACGTACACCCTCAACACGTCGGCGGACCGCTACTCCATCCGCCTGGCCGCG
CGGGAGAACGCGTCCTCGGAGAAGGGCATCAGCGACCTCCAGTTCATCCTGGCCGACCTGGCCACCAAGGCGAACACGGA
GGAGTCGACGCGGCTCGCCACCCAGGTGCAGCGCAGCCTCGTGGGGGGCCTCTCCCGCAAGTACAAGGGCATCCGCGACC
TGGGCCACAAGGAAGCGCTCTTCTATGTGTTGTTGGGCGTGAAGATGCCGGCCATCCTGGTGGAGACTTCGTTCCTCTCC
AATCCAGACGAAGAGGCACGTCTCAAGTCCAATGTCTACCAGACCGAGGTCGCCAAGGCGATTGCCCATGGCGTGGAGGA
GTTCCTCGGAGACCGCCGCCGCGTGGCGAAGGTGGACTGA

Upstream 100 bases:

>100_bases
GGGTGGCTGCGCTGAGACAGATGGTAGGGGCCGAAAATTTGCCGGGGAGGTGGGGCTGTGTGACACACGCCTGTAGCTCG
CGCCCACCCGGAGGAACCCC

Downstream 100 bases:

>100_bases
GCGCGTCCGGCGCTTCGCCAGAAGTGGGTAGCAAGGACGGACGCGCTGGGTAGTTCAGTTCCGTTCGGCTGGGGAACGCG
CGTGTCACCGGGTAGACGCC

Product: N-acetylmuramoyl-L-alanine amidase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 599; Mature: 599

Protein sequence:

>599_residues
MHSRLVIVLPVLLLLVPSAVGAAKRDEAEEAYQGARKVYYALKDDAARRKLRHHWLNVVARFESVAARFPKSDRAPDALF
TAAEMLQELSRISFVEDDLKASITDYTKLLEGYPKHRLSDDGALALAKIHVHRLDQPESARKVLTETLAVNSKGDRAREM
RELLASLPSPKAPPPPPRKAAPVVAKSDSSASGKTSTAGKATAMADSGKSSASVDASAKGSVSSKAVASAETSASGKGSA
PDDTSSAGTSDTSKAVASTDTSKDAQPAPAVEASGPAERPSSSLVAAIEKMAREPSPRIPQKEPSAPVKEDAREGSLDAA
VAAAMASKPAAAEPPRPITRPVDDKVAQARLKAVAKQSRSMELTLAEQLGLKVRRVVIDPGHGGHDTGAIGKGGTREKDV
ALSISLKLAEELREKGLEVVLTRDDDRFIRLEDRAKYANAEHGDLFISVHCNAAEKRTLRGIETYTLNTSADRYSIRLAA
RENASSEKGISDLQFILADLATKANTEESTRLATQVQRSLVGGLSRKYKGIRDLGHKEALFYVLLGVKMPAILVETSFLS
NPDEEARLKSNVYQTEVAKAIAHGVEEFLGDRRRVAKVD

Sequences:

>Translated_599_residues
MHSRLVIVLPVLLLLVPSAVGAAKRDEAEEAYQGARKVYYALKDDAARRKLRHHWLNVVARFESVAARFPKSDRAPDALF
TAAEMLQELSRISFVEDDLKASITDYTKLLEGYPKHRLSDDGALALAKIHVHRLDQPESARKVLTETLAVNSKGDRAREM
RELLASLPSPKAPPPPPRKAAPVVAKSDSSASGKTSTAGKATAMADSGKSSASVDASAKGSVSSKAVASAETSASGKGSA
PDDTSSAGTSDTSKAVASTDTSKDAQPAPAVEASGPAERPSSSLVAAIEKMAREPSPRIPQKEPSAPVKEDAREGSLDAA
VAAAMASKPAAAEPPRPITRPVDDKVAQARLKAVAKQSRSMELTLAEQLGLKVRRVVIDPGHGGHDTGAIGKGGTREKDV
ALSISLKLAEELREKGLEVVLTRDDDRFIRLEDRAKYANAEHGDLFISVHCNAAEKRTLRGIETYTLNTSADRYSIRLAA
RENASSEKGISDLQFILADLATKANTEESTRLATQVQRSLVGGLSRKYKGIRDLGHKEALFYVLLGVKMPAILVETSFLS
NPDEEARLKSNVYQTEVAKAIAHGVEEFLGDRRRVAKVD
>Mature_599_residues
MHSRLVIVLPVLLLLVPSAVGAAKRDEAEEAYQGARKVYYALKDDAARRKLRHHWLNVVARFESVAARFPKSDRAPDALF
TAAEMLQELSRISFVEDDLKASITDYTKLLEGYPKHRLSDDGALALAKIHVHRLDQPESARKVLTETLAVNSKGDRAREM
RELLASLPSPKAPPPPPRKAAPVVAKSDSSASGKTSTAGKATAMADSGKSSASVDASAKGSVSSKAVASAETSASGKGSA
PDDTSSAGTSDTSKAVASTDTSKDAQPAPAVEASGPAERPSSSLVAAIEKMAREPSPRIPQKEPSAPVKEDAREGSLDAA
VAAAMASKPAAAEPPRPITRPVDDKVAQARLKAVAKQSRSMELTLAEQLGLKVRRVVIDPGHGGHDTGAIGKGGTREKDV
ALSISLKLAEELREKGLEVVLTRDDDRFIRLEDRAKYANAEHGDLFISVHCNAAEKRTLRGIETYTLNTSADRYSIRLAA
RENASSEKGISDLQFILADLATKANTEESTRLATQVQRSLVGGLSRKYKGIRDLGHKEALFYVLLGVKMPAILVETSFLS
NPDEEARLKSNVYQTEVAKAIAHGVEEFLGDRRRVAKVD

Specific function: Cell-wall hydrolase involved in septum cleavage during cell division [H]

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acetylmuramoyl-L-alanine amidase 3 family [H]

Homologues:

Organism=Escherichia coli, GI87082163, Length=228, Percent_Identity=34.6491228070175, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI1788776, Length=225, Percent_Identity=34.2222222222222, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI1790611, Length=235, Percent_Identity=31.4893617021277, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021731
- InterPro:   IPR002508 [H]

Pfam domain/function: PF01520 Amidase_3; PF11741 AMIN [H]

EC number: =3.5.1.28 [H]

Molecular weight: Translated: 64105; Mature: 64105

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSRLVIVLPVLLLLVPSAVGAAKRDEAEEAYQGARKVYYALKDDAARRKLRHHWLNVVA
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFESVAARFPKSDRAPDALFTAAEMLQELSRISFVEDDLKASITDYTKLLEGYPKHRLSD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DGALALAKIHVHRLDQPESARKVLTETLAVNSKGDRAREMRELLASLPSPKAPPPPPRKA
CCCEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
APVVAKSDSSASGKTSTAGKATAMADSGKSSASVDASAKGSVSSKAVASAETSASGKGSA
CCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
PDDTSSAGTSDTSKAVASTDTSKDAQPAPAVEASGPAERPSSSLVAAIEKMAREPSPRIP
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
QKEPSAPVKEDAREGSLDAAVAAAMASKPAAAEPPRPITRPVDDKVAQARLKAVAKQSRS
CCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
MELTLAEQLGLKVRRVVIDPGHGGHDTGAIGKGGTREKDVALSISLKLAEELREKGLEVV
EEEEHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEE
LTRDDDRFIRLEDRAKYANAEHGDLFISVHCNAAEKRTLRGIETYTLNTSADRYSIRLAA
EECCCCCEEEEECHHHHCCCCCCCEEEEEECCCHHHHHHCCCEEEEECCCCCCEEEEEEE
RENASSEKGISDLQFILADLATKANTEESTRLATQVQRSLVGGLSRKYKGIRDLGHKEAL
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FYVLLGVKMPAILVETSFLSNPDEEARLKSNVYQTEVAKAIAHGVEEFLGDRRRVAKVD
HHHHHHHCCCHHHEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
>Mature Secondary Structure
MHSRLVIVLPVLLLLVPSAVGAAKRDEAEEAYQGARKVYYALKDDAARRKLRHHWLNVVA
CCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFESVAARFPKSDRAPDALFTAAEMLQELSRISFVEDDLKASITDYTKLLEGYPKHRLSD
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DGALALAKIHVHRLDQPESARKVLTETLAVNSKGDRAREMRELLASLPSPKAPPPPPRKA
CCCEEEEHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
APVVAKSDSSASGKTSTAGKATAMADSGKSSASVDASAKGSVSSKAVASAETSASGKGSA
CCEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC
PDDTSSAGTSDTSKAVASTDTSKDAQPAPAVEASGPAERPSSSLVAAIEKMAREPSPRIP
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
QKEPSAPVKEDAREGSLDAAVAAAMASKPAAAEPPRPITRPVDDKVAQARLKAVAKQSRS
CCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
MELTLAEQLGLKVRRVVIDPGHGGHDTGAIGKGGTREKDVALSISLKLAEELREKGLEVV
EEEEHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCEEE
LTRDDDRFIRLEDRAKYANAEHGDLFISVHCNAAEKRTLRGIETYTLNTSADRYSIRLAA
EECCCCCEEEEECHHHHCCCCCCCEEEEEECCCHHHHHHCCCEEEEECCCCCCEEEEEEE
RENASSEKGISDLQFILADLATKANTEESTRLATQVQRSLVGGLSRKYKGIRDLGHKEAL
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
FYVLLGVKMPAILVETSFLSNPDEEARLKSNVYQTEVAKAIAHGVEEFLGDRRRVAKVD
HHHHHHHCCCHHHEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]