Click here to switch to the map view.

The map label for this gene is yrbE [C]

Identifier: 108757210

GI number: 108757210

Start: 4702925

End: 4703671

Strand: Direct

Name: yrbE [C]

Synonym: MXAN_3910

Alternate gene names: 108757210

Gene position: 4702925-4703671 (Clockwise)

Preceding gene: 108761681

Following gene: 108762782

Centisome position: 51.46

GC content: 72.82

Gene sequence:

>747_bases
ATGAACGGCGTGCTGTCGTTCTTCGGAGCGCCGGTGGTGATGCTGGCGCGCACGGTGCGCGCCTCCACCCGGGACGGCGT
GCCCTGGCGCGAGTCCCTGGCGCAGCTCCACGAGCTGGGCGGGCGCAGCGTGTGGCTGGTGATGTCCGGCATGGCCTTCT
TCGGCGCGGTGCTCGTCACCATCGCCAACAGCCAGGCACGGCGCTTCGTGGGCAACGTGGCGGTGCTGGGGCCCGCGTAC
TTCGAGCTGCTCATCCGCGAGCTGGGCCCGGCGGTGTCCGCGCTGCTCACGGCCTCACGCGCGGGCGCGGCTCACGCGGC
CGAGCTGTCCACCATGAGCGTCAACGAACAGGTGGAGGCCCTGGAGATGTCCGCGGGCGACCCCTACGCGGACCTCGTCG
CGCCCCGGGTGTTCGCGGGTGTGATGGGCGTGCCCCTGCTGTGCATCCTGGGCACCATCGCGGCCACGCTGTCCGCGGCG
GCCGTGGCGCAGTTCGCCTTCGGCGTGGATGGGCGGGCCTTCATGGATCCGCGCTACGTGGACGGCTGGGACTTGCTGGC
CGCACTCCTGAAGGCCGCGGGCTGCGGGCTCTACATTCCGCTGGCGGCGGCGGTGGCGGGCCTCAAGGCGCGCGGCGGCG
CCGAGGCCGTGGGTGAGGCCACCACCGACGGCGTGGTGGCGGCGAGCCTGGGATGCCTGCTCATCGACCTCGCCGTGTCG
CTGGCCTTCCAACTGCTGCGCCTGTGA

Upstream 100 bases:

>100_bases
ACGCCGTGGGCCAGGCGGCGGCCAACGCGGTGGTGCGCAGTTGCGCGGCCATCTTCGTCCTCGACTTCGCCCTCACGTCC
TTGCTCGCGGGGTGGATGGG

Downstream 100 bases:

>100_bases
GCGAGCCCCACGCATGACGCCCCTTCCCGACAGCGAGGCCCTGCGATTCCGGGACGTGCACGTCGCGTTCGACGAGGGAC
GCCGGCGCGTGCTCGCGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNGVLSFFGAPVVMLARTVRASTRDGVPWRESLAQLHELGGRSVWLVMSGMAFFGAVLVTIANSQARRFVGNVAVLGPAY
FELLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEALEMSAGDPYADLVAPRVFAGVMGVPLLCILGTIAATLSAA
AVAQFAFGVDGRAFMDPRYVDGWDLLAALLKAAGCGLYIPLAAAVAGLKARGGAEAVGEATTDGVVAASLGCLLIDLAVS
LAFQLLRL

Sequences:

>Translated_248_residues
MNGVLSFFGAPVVMLARTVRASTRDGVPWRESLAQLHELGGRSVWLVMSGMAFFGAVLVTIANSQARRFVGNVAVLGPAY
FELLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEALEMSAGDPYADLVAPRVFAGVMGVPLLCILGTIAATLSAA
AVAQFAFGVDGRAFMDPRYVDGWDLLAALLKAAGCGLYIPLAAAVAGLKARGGAEAVGEATTDGVVAASLGCLLIDLAVS
LAFQLLRL
>Mature_248_residues
MNGVLSFFGAPVVMLARTVRASTRDGVPWRESLAQLHELGGRSVWLVMSGMAFFGAVLVTIANSQARRFVGNVAVLGPAY
FELLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEALEMSAGDPYADLVAPRVFAGVMGVPLLCILGTIAATLSAA
AVAQFAFGVDGRAFMDPRYVDGWDLLAALLKAAGCGLYIPLAAAVAGLKARGGAEAVGEATTDGVVAASLGCLLIDLAVS
LAFQLLRL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=215, Percent_Identity=30.6976744186047, Blast_Score=82, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 25492; Mature: 25492

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGVLSFFGAPVVMLARTVRASTRDGVPWRESLAQLHELGGRSVWLVMSGMAFFGAVLVT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
IANSQARRFVGNVAVLGPAYFELLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LEMSAGDPYADLVAPRVFAGVMGVPLLCILGTIAATLSAAAVAQFAFGVDGRAFMDPRYV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
DGWDLLAALLKAAGCGLYIPLAAAVAGLKARGGAEAVGEATTDGVVAASLGCLLIDLAVS
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH
LAFQLLRL
HHHHHHHC
>Mature Secondary Structure
MNGVLSFFGAPVVMLARTVRASTRDGVPWRESLAQLHELGGRSVWLVMSGMAFFGAVLVT
CCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHH
IANSQARRFVGNVAVLGPAYFELLIRELGPAVSALLTASRAGAAHAAELSTMSVNEQVEA
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
LEMSAGDPYADLVAPRVFAGVMGVPLLCILGTIAATLSAAAVAQFAFGVDGRAFMDPRYV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
DGWDLLAALLKAAGCGLYIPLAAAVAGLKARGGAEAVGEATTDGVVAASLGCLLIDLAVS
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH
LAFQLLRL
HHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA