| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757208
Identifier: 108757208
GI number: 108757208
Start: 268797
End: 269801
Strand: Reverse
Name: 108757208
Synonym: MXAN_0221
Alternate gene names: NA
Gene position: 269801-268797 (Counterclockwise)
Preceding gene: 108763021
Following gene: 108761337
Centisome position: 2.95
GC content: 65.37
Gene sequence:
>1005_bases ATGCCCATGCGACTGAGGCCTTCGCTGTATCTCGCGAGCACGCTGCTGCTTGGCATCGCCACCGGCTGTGGCGAGGACAT CGCGTCCCACGAAGAAGCGCTCGGCGCGGTGGAAGCCGCGGCGGTCTCCACCTCCGGCGCCACCACCCATTTCCGCAACT GGCTGTCGTCCAACGGCTACGACAGCTACGACTTCATTCGCACGGACCTCACGGGCGGCAGCTACGGCGGCAAGGCCAGC GCCTCCGACACCGTGACGAAGCAGCCCGTCATCTTCATCCACGGCAACTCGGACAAGGCGGTGGGCTCGGTCTTCGGCCA GACGGGCTGGACCAACTCCCTCGAGTACTTCCACTCGCGGGGTTACAAGACGAGCGAGCTGTACGCGACGACGTGGGGCC CGGCCAACGCGCTCCAGTCGGCGAACCAGTACCACTCGAAGCAGAACGTGATGAAGGTGCGCAAGTTCATCGAGGCGGTG AAGGCGTACACCGGGGCCTCGAAGGTGGACATCATCGCCCACTCCATGGGCGTGACGCTGGCGCGCAAGGCCATCCTCGG CGGCACGGCCCACGACGCGGCGGACGGCGGCACATACAACGTCGGCGTACCGCTCACGTCCTCGGTGGACACCTTCGTCG GCATCGCCGGCGCCAACCTGGGCCTGACGTCTTGTTACATGTCCGGCCCGTCGACGCCCACCTGCGGCTCCACCAACGGC CTGTACCCGGGCTACCTCTTCTGGGGCAGCGTCACCGGCCGCTCGACGTACCTCAATGACTTGCGCTCGACGAGCGGTTA CGAGGGCGCCTTCCGCTACACCATCTACTCCACGGCGGACGAAATCATCGGCTACGACGGCATCGTCTACGGTGAGTACA CGTCACGCATCCCCGGGCAGACGGGTGAGAAGCGCTACACCGGCTATCCCTACGGCCACTTCAACTCGAAGGACCTGACG GCCGAGGTTCAGTACGACATGGTGGTCAACCACACCATCCCGTAG
Upstream 100 bases:
>100_bases CGACGCAACGCGACAACGTCCGCGCACGTCCAGTCAGCGGAAGACGCGCGCGCGAGATGTCTCTAGACTGTGTATCGAAT TCCCAAACAAACGAAGGAGT
Downstream 100 bases:
>100_bases TCATCCGCACCCGGCACCTCCACCCTCGCGAAAGGGTGGAGGTGGACCGGCTCACCACCCCACTACGGCTGGGGCAGCAC GCCCGGCGTCGGCTCGCCTT
Product: lipase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPMRLRPSLYLASTLLLGIATGCGEDIASHEEALGAVEAAAVSTSGATTHFRNWLSSNGYDSYDFIRTDLTGGSYGGKAS ASDTVTKQPVIFIHGNSDKAVGSVFGQTGWTNSLEYFHSRGYKTSELYATTWGPANALQSANQYHSKQNVMKVRKFIEAV KAYTGASKVDIIAHSMGVTLARKAILGGTAHDAADGGTYNVGVPLTSSVDTFVGIAGANLGLTSCYMSGPSTPTCGSTNG LYPGYLFWGSVTGRSTYLNDLRSTSGYEGAFRYTIYSTADEIIGYDGIVYGEYTSRIPGQTGEKRYTGYPYGHFNSKDLT AEVQYDMVVNHTIP
Sequences:
>Translated_334_residues MPMRLRPSLYLASTLLLGIATGCGEDIASHEEALGAVEAAAVSTSGATTHFRNWLSSNGYDSYDFIRTDLTGGSYGGKAS ASDTVTKQPVIFIHGNSDKAVGSVFGQTGWTNSLEYFHSRGYKTSELYATTWGPANALQSANQYHSKQNVMKVRKFIEAV KAYTGASKVDIIAHSMGVTLARKAILGGTAHDAADGGTYNVGVPLTSSVDTFVGIAGANLGLTSCYMSGPSTPTCGSTNG LYPGYLFWGSVTGRSTYLNDLRSTSGYEGAFRYTIYSTADEIIGYDGIVYGEYTSRIPGQTGEKRYTGYPYGHFNSKDLT AEVQYDMVVNHTIP >Mature_333_residues PMRLRPSLYLASTLLLGIATGCGEDIASHEEALGAVEAAAVSTSGATTHFRNWLSSNGYDSYDFIRTDLTGGSYGGKASA SDTVTKQPVIFIHGNSDKAVGSVFGQTGWTNSLEYFHSRGYKTSELYATTWGPANALQSANQYHSKQNVMKVRKFIEAVK AYTGASKVDIIAHSMGVTLARKAILGGTAHDAADGGTYNVGVPLTSSVDTFVGIAGANLGLTSCYMSGPSTPTCGSTNGL YPGYLFWGSVTGRSTYLNDLRSTSGYEGAFRYTIYSTADEIIGYDGIVYGEYTSRIPGQTGEKRYTGYPYGHFNSKDLTA EVQYDMVVNHTIP
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17563666, Length=318, Percent_Identity=41.8238993710692, Blast_Score=233, Evalue=1e-61, Organism=Caenorhabditis elegans, GI17562542, Length=314, Percent_Identity=41.7197452229299, Blast_Score=229, Evalue=2e-60, Organism=Caenorhabditis elegans, GI193205679, Length=306, Percent_Identity=41.1764705882353, Blast_Score=210, Evalue=7e-55, Organism=Caenorhabditis elegans, GI133901862, Length=353, Percent_Identity=37.6770538243626, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17534539, Length=306, Percent_Identity=37.9084967320261, Blast_Score=163, Evalue=9e-41, Organism=Caenorhabditis elegans, GI17567733, Length=276, Percent_Identity=35.1449275362319, Blast_Score=158, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17567421, Length=282, Percent_Identity=36.5248226950355, Blast_Score=155, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17531701, Length=297, Percent_Identity=38.047138047138, Blast_Score=148, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17550114, Length=273, Percent_Identity=33.6996336996337, Blast_Score=141, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17537009, Length=269, Percent_Identity=35.3159851301115, Blast_Score=130, Evalue=7e-31, Organism=Caenorhabditis elegans, GI17544624, Length=282, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=5e-30, Organism=Caenorhabditis elegans, GI71993542, Length=260, Percent_Identity=32.6923076923077, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI32564202, Length=179, Percent_Identity=39.1061452513966, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI17533213, Length=258, Percent_Identity=32.1705426356589, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17536231, Length=220, Percent_Identity=30, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17536233, Length=221, Percent_Identity=30.316742081448, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI193204939, Length=194, Percent_Identity=29.3814432989691, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35684; Mature: 35553
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMRLRPSLYLASTLLLGIATGCGEDIASHEEALGAVEAAAVSTSGATTHFRNWLSSNGY CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC DSYDFIRTDLTGGSYGGKASASDTVTKQPVIFIHGNSDKAVGSVFGQTGWTNSLEYFHSR CCHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHC GYKTSELYATTWGPANALQSANQYHSKQNVMKVRKFIEAVKAYTGASKVDIIAHSMGVTL CCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ARKAILGGTAHDAADGGTYNVGVPLTSSVDTFVGIAGANLGLTSCYMSGPSTPTCGSTNG HHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHEECCCCCCHHEEEECCCCCCCCCCCCC LYPGYLFWGSVTGRSTYLNDLRSTSGYEGAFRYTIYSTADEIIGYDGIVYGEYTSRIPGQ CCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHCCCCEEECCHHCCCCCC TGEKRYTGYPYGHFNSKDLTAEVQYDMVVNHTIP CCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC >Mature Secondary Structure PMRLRPSLYLASTLLLGIATGCGEDIASHEEALGAVEAAAVSTSGATTHFRNWLSSNGY CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC DSYDFIRTDLTGGSYGGKASASDTVTKQPVIFIHGNSDKAVGSVFGQTGWTNSLEYFHSR CCHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCCCCCHHHHHHHHC GYKTSELYATTWGPANALQSANQYHSKQNVMKVRKFIEAVKAYTGASKVDIIAHSMGVTL CCCCHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ARKAILGGTAHDAADGGTYNVGVPLTSSVDTFVGIAGANLGLTSCYMSGPSTPTCGSTNG HHHHHHCCCCCCCCCCCEEEECCCCCCCHHHHHEECCCCCCHHEEEECCCCCCCCCCCCC LYPGYLFWGSVTGRSTYLNDLRSTSGYEGAFRYTIYSTADEIIGYDGIVYGEYTSRIPGQ CCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHCCCCEEECCHHCCCCCC TGEKRYTGYPYGHFNSKDLTAEVQYDMVVNHTIP CCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA