| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757154
Identifier: 108757154
GI number: 108757154
Start: 132926
End: 134035
Strand: Direct
Name: 108757154
Synonym: MXAN_0114
Alternate gene names: NA
Gene position: 132926-134035 (Clockwise)
Preceding gene: 108756973
Following gene: 108756784
Centisome position: 1.45
GC content: 70.99
Gene sequence:
>1110_bases GTGGGTCGCCTACAGCAGCCCTCCAACCCTCCCCGAAGGAACTTCCCCATGCGCCTCTCTCCTCTCAGCGGCTCCGCCTC CTCCGCCGTCCGCTCCCCGGCCCAGGATGTCTCCGTCTCCCGGCCTTCCGCGTCGCTGTCTGGTCCCTCGGGTGCCTCGG CCCAGAAGCCGTCGCTGGGGCGCATCGGGATGCAGCAGGATGGCTTCGACCTGGGCGGCGGCAAGGCCGAGTCCCTGGGC AAGCTGCTCGAGGGGGCCCTGGCGATTATCAACACGCTGGCCCAGCTCCAGCAGGCCATGCAGGCGGGCGGCGCGGCGGG TGGCGCGCAGGGCGCTTCGTACGGCCAGGGCATTTCCGGTGCTCAAGGCGCCCAGGGCGCGTCCTCGTCCAAGTGCTTCT TGGACAGCTCCTTCTCGCCTGCGTCGGCCCGCGGTGGCCGTCCTCCCGTGGAGCTGAACCCCAGCGCCCAGGGCCCGTCT CCGTTCATGAATGAGCCGGTGGAGGGCCTCACGTCGGCGCCTGCCGCTGGTGGCCCCGCGCCCGCGCCCGCTCCGGTGAG TGACATCGAGGGTGCGCCGGTGGGCGGCATCGGCGCGGCGCCCTCGGTGGGCGCGAGCACGGGTGCCGGCGGCGCGAGCC TGGGCGGCAACCTGCCTCCGGCGCTGGAGAAGCTGCGTCCGGCGCTCGAGTCCGCGGCGGCCAAGACGGGCGTGCCGGTG GAGATGCTGGCCGCGCAGGTGTGGGCGGAGTCGCGCGGCAAGGTGGACGCCTCGTCCACCAACGGCGGCAACGGCATGAC GGACACGGGGTTGATGCAGGTGAACCCCAACACCTTCAAGGGGCTGCAGGACAAGTACCCCGAGTTGCAGGGCAAGAACC TGTCTGACCCGGAGACGAACATCCTCGCGGGCGCCTGCTACATGAAGGACATGAAGGCGCAGTTCGGGAACTGGGACCTG GCCCTGCGCGCCTACAACTCCGGTCCGAACGGCGTGGACAAGAGCAACCCGCATGCGATTCCCGCGGGCCTGGGCAGTGC GGACTACGTGCGCAACGTGAATCAGTTCGCCAGCACCCTGGCTTCCGGTCAGGGCGCGCTGCCGGCGTAG
Upstream 100 bases:
>100_bases GCCTCACGGGGCGCGGGCGCTCCAGCGACTCAAGTGAAATCAGGGGTTTGGCGGGGAAAGGAGGGCTCCCGACGGTTGGC ACACCTGCTGCTACTGGTGC
Downstream 100 bases:
>100_bases TCGACGCTGGCAGGTAGGACGACGGCGGGAGGCTCAGGAAGACTCGCGGCCGAAGCTGCCGCGAGCCCGGGAGCCACCGC CGTCGGTGTTACCCAGGACG
Product: transglycosylase SLT domain-containing protein
Products: NA
Alternate protein names: Transglycosylase SLT Domain-Containing Protein; Type III Helper
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MGRLQQPSNPPRRNFPMRLSPLSGSASSAVRSPAQDVSVSRPSASLSGPSGASAQKPSLGRIGMQQDGFDLGGGKAESLG KLLEGALAIINTLAQLQQAMQAGGAAGGAQGASYGQGISGAQGAQGASSSKCFLDSSFSPASARGGRPPVELNPSAQGPS PFMNEPVEGLTSAPAAGGPAPAPAPVSDIEGAPVGGIGAAPSVGASTGAGGASLGGNLPPALEKLRPALESAAAKTGVPV EMLAAQVWAESRGKVDASSTNGGNGMTDTGLMQVNPNTFKGLQDKYPELQGKNLSDPETNILAGACYMKDMKAQFGNWDL ALRAYNSGPNGVDKSNPHAIPAGLGSADYVRNVNQFASTLASGQGALPA
Sequences:
>Translated_369_residues MGRLQQPSNPPRRNFPMRLSPLSGSASSAVRSPAQDVSVSRPSASLSGPSGASAQKPSLGRIGMQQDGFDLGGGKAESLG KLLEGALAIINTLAQLQQAMQAGGAAGGAQGASYGQGISGAQGAQGASSSKCFLDSSFSPASARGGRPPVELNPSAQGPS PFMNEPVEGLTSAPAAGGPAPAPAPVSDIEGAPVGGIGAAPSVGASTGAGGASLGGNLPPALEKLRPALESAAAKTGVPV EMLAAQVWAESRGKVDASSTNGGNGMTDTGLMQVNPNTFKGLQDKYPELQGKNLSDPETNILAGACYMKDMKAQFGNWDL ALRAYNSGPNGVDKSNPHAIPAGLGSADYVRNVNQFASTLASGQGALPA >Mature_368_residues GRLQQPSNPPRRNFPMRLSPLSGSASSAVRSPAQDVSVSRPSASLSGPSGASAQKPSLGRIGMQQDGFDLGGGKAESLGK LLEGALAIINTLAQLQQAMQAGGAAGGAQGASYGQGISGAQGAQGASSSKCFLDSSFSPASARGGRPPVELNPSAQGPSP FMNEPVEGLTSAPAAGGPAPAPAPVSDIEGAPVGGIGAAPSVGASTGAGGASLGGNLPPALEKLRPALESAAAKTGVPVE MLAAQVWAESRGKVDASSTNGGNGMTDTGLMQVNPNTFKGLQDKYPELQGKNLSDPETNILAGACYMKDMKAQFGNWDLA LRAYNSGPNGVDKSNPHAIPAGLGSADYVRNVNQFASTLASGQGALPA
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36614; Mature: 36483
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLQQPSNPPRRNFPMRLSPLSGSASSAVRSPAQDVSVSRPSASLSGPSGASAQKPSLG CCCCCCCCCCCCCCCCEEECCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCC RIGMQQDGFDLGGGKAESLGKLLEGALAIINTLAQLQQAMQAGGAAGGAQGASYGQGISG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AQGAQGASSSKCFLDSSFSPASARGGRPPVELNPSAQGPSPFMNEPVEGLTSAPAAGGPA CCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCCCC PAPAPVSDIEGAPVGGIGAAPSVGASTGAGGASLGGNLPPALEKLRPALESAAAKTGVPV CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH EMLAAQVWAESRGKVDASSTNGGNGMTDTGLMQVNPNTFKGLQDKYPELQGKNLSDPETN HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHCHHHHCCCCCCCCCCCCCHH ILAGACYMKDMKAQFGNWDLALRAYNSGPNGVDKSNPHAIPAGLGSADYVRNVNQFASTL HHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ASGQGALPA HCCCCCCCC >Mature Secondary Structure GRLQQPSNPPRRNFPMRLSPLSGSASSAVRSPAQDVSVSRPSASLSGPSGASAQKPSLG CCCCCCCCCCCCCCCEEECCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCC RIGMQQDGFDLGGGKAESLGKLLEGALAIINTLAQLQQAMQAGGAAGGAQGASYGQGISG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC AQGAQGASSSKCFLDSSFSPASARGGRPPVELNPSAQGPSPFMNEPVEGLTSAPAAGGPA CCCCCCCCCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHCCCCCCCCC PAPAPVSDIEGAPVGGIGAAPSVGASTGAGGASLGGNLPPALEKLRPALESAAAKTGVPV CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCH EMLAAQVWAESRGKVDASSTNGGNGMTDTGLMQVNPNTFKGLQDKYPELQGKNLSDPETN HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHCHHHHCCCCCCCCCCCCCHH ILAGACYMKDMKAQFGNWDLALRAYNSGPNGVDKSNPHAIPAGLGSADYVRNVNQFASTL HHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ASGQGALPA HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA