| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is phoP2 [H]
Identifier: 108757150
GI number: 108757150
Start: 3231177
End: 3231893
Strand: Reverse
Name: phoP2 [H]
Synonym: MXAN_2778
Alternate gene names: 108757150
Gene position: 3231893-3231177 (Counterclockwise)
Preceding gene: 108763592
Following gene: 108761565
Centisome position: 35.36
GC content: 69.46
Gene sequence:
>717_bases ATGAACACCGCCACATCCACCCCGCCCCTCCGTCCCGCCATCCTCATCGTCGAGGACGACGCCCACCTGCGCGTCGGCCT CCGGGACAACCTGCTGGACGAGGGTTACCTCGTCGCCGAGGCCCCCAGCACCCGCGACGCGGAGCGGCTGCTGCAAGAGC GTGCGTTCGACCTGCTCATCCTGGACGTCATGCTGCCCGGCGAGGACGGCTACAGCTTCTGCCGCCGGCTGCGGACGCAG GGCAACAAGAGCATGGTGCTGATGCTCACCGCGCGCTCTCTGGAGGACGACATCCTCAGGGGCTTCGAGGTGGGCGCGCA GGACTACCTCACCAAGCCCTACCGGCTGCGGGAGCTGCTGGCCCGGGTACGCGCCCTGGTGCGCCGCTCCGGCACGGCGC CGCCGGAGCAGATGGGCTTCAGCAGCTTCACCCTGGACCTGGGCCGGCGGCAGGTGTCGCGCGCGGACGGTTCGGTGGTG GAGCTGACGCGCACGGAGTTCGACCTGCTGGCCTTCCTGCTGCGGCACCAGGACCGGGCCCTGCCCCGAGGCGAAATCCT GGACGCCGTCTGGGGCCGCGACGTGGTGGTGGACCCGCGGACGGTGGACAACTTCGTCTCCAGCCTGAAGAAGAAGCTGG GGTGGACGAGCACCTCTGGATTCTCCATCCACACCATCCGGGGCGTGGGCTACCGCATGGAGGTCGCTTCGTCATGA
Upstream 100 bases:
>100_bases TGTGCCGCAAAATCATGAAGCTGCACCGGGGCGACATCCAGGTGGCCGCCTCGGGACCCGACGGCACCACCTTCGCGCTG ATATTCAACGAGCCGGCTCG
Downstream 100 bases:
>100_bases CACAACCATGACGAAGCGATGGCCGCCCCACCGCCATTCGAAGACGCCAACTCCGTAGGTTGACTCTTGCGTGGACAGGG CGCTCCGCAGCCACCCGTCC
Product: DNA-binding response regulator PhoP2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MNTATSTPPLRPAILIVEDDAHLRVGLRDNLLDEGYLVAEAPSTRDAERLLQERAFDLLILDVMLPGEDGYSFCRRLRTQ GNKSMVLMLTARSLEDDILRGFEVGAQDYLTKPYRLRELLARVRALVRRSGTAPPEQMGFSSFTLDLGRRQVSRADGSVV ELTRTEFDLLAFLLRHQDRALPRGEILDAVWGRDVVVDPRTVDNFVSSLKKKLGWTSTSGFSIHTIRGVGYRMEVASS
Sequences:
>Translated_238_residues MNTATSTPPLRPAILIVEDDAHLRVGLRDNLLDEGYLVAEAPSTRDAERLLQERAFDLLILDVMLPGEDGYSFCRRLRTQ GNKSMVLMLTARSLEDDILRGFEVGAQDYLTKPYRLRELLARVRALVRRSGTAPPEQMGFSSFTLDLGRRQVSRADGSVV ELTRTEFDLLAFLLRHQDRALPRGEILDAVWGRDVVVDPRTVDNFVSSLKKKLGWTSTSGFSIHTIRGVGYRMEVASS >Mature_238_residues MNTATSTPPLRPAILIVEDDAHLRVGLRDNLLDEGYLVAEAPSTRDAERLLQERAFDLLILDVMLPGEDGYSFCRRLRTQ GNKSMVLMLTARSLEDDILRGFEVGAQDYLTKPYRLRELLARVRALVRRSGTAPPEQMGFSSFTLDLGRRQVSRADGSVV ELTRTEFDLLAFLLRHQDRALPRGEILDAVWGRDVVVDPRTVDNFVSSLKKKLGWTSTSGFSIHTIRGVGYRMEVASS
Specific function: This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by phoB and phoR when phosphate is limited [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1789809, Length=225, Percent_Identity=38.2222222222222, Blast_Score=151, Evalue=4e-38, Organism=Escherichia coli, GI1786784, Length=224, Percent_Identity=39.2857142857143, Blast_Score=134, Evalue=6e-33, Organism=Escherichia coli, GI1786599, Length=224, Percent_Identity=38.8392857142857, Blast_Score=131, Evalue=3e-32, Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=35.2173913043478, Blast_Score=124, Evalue=4e-30, Organism=Escherichia coli, GI1787375, Length=222, Percent_Identity=32.4324324324324, Blast_Score=121, Evalue=5e-29, Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=36.3636363636364, Blast_Score=119, Evalue=1e-28, Organism=Escherichia coli, GI87082012, Length=218, Percent_Identity=37.1559633027523, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=37.3873873873874, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=35.5555555555556, Blast_Score=115, Evalue=2e-27, Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=35, Blast_Score=113, Evalue=1e-26, Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=35.5555555555556, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI2367329, Length=232, Percent_Identity=36.6379310344828, Blast_Score=106, Evalue=1e-24, Organism=Escherichia coli, GI1787229, Length=209, Percent_Identity=33.9712918660287, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI145693140, Length=230, Percent_Identity=28.695652173913, Blast_Score=81, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR011879 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 26736; Mature: 26736
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTATSTPPLRPAILIVEDDAHLRVGLRDNLLDEGYLVAEAPSTRDAERLLQERAFDLLI CCCCCCCCCCCEEEEEEECCCEEEECCHHCCCCCCEEEECCCCCHHHHHHHHHHHHHEEE LDVMLPGEDGYSFCRRLRTQGNKSMVLMLTARSLEDDILRGFEVGAQDYLTKPYRLRELL EEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHCCCHHHHHHH ARVRALVRRSGTAPPEQMGFSSFTLDLGRRQVSRADGSVVELTRTEFDLLAFLLRHQDRA HHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCC LPRGEILDAVWGRDVVVDPRTVDNFVSSLKKKLGWTSTSGFSIHTIRGVGYRMEVASS CCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCC >Mature Secondary Structure MNTATSTPPLRPAILIVEDDAHLRVGLRDNLLDEGYLVAEAPSTRDAERLLQERAFDLLI CCCCCCCCCCCEEEEEEECCCEEEECCHHCCCCCCEEEECCCCCHHHHHHHHHHHHHEEE LDVMLPGEDGYSFCRRLRTQGNKSMVLMLTARSLEDDILRGFEVGAQDYLTKPYRLRELL EEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCHHHHHCCCHHHHHHH ARVRALVRRSGTAPPEQMGFSSFTLDLGRRQVSRADGSVVELTRTEFDLLAFLLRHQDRA HHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCC LPRGEILDAVWGRDVVVDPRTVDNFVSSLKKKLGWTSTSGFSIHTIRGVGYRMEVASS CCHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2115874; 10984043 [H]