| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757095
Identifier: 108757095
GI number: 108757095
Start: 5473386
End: 5473958
Strand: Reverse
Name: 108757095
Synonym: MXAN_4422
Alternate gene names: NA
Gene position: 5473958-5473386 (Counterclockwise)
Preceding gene: 108760696
Following gene: 108757681
Centisome position: 59.89
GC content: 66.67
Gene sequence:
>573_bases ATGTTGGAAGCGCTCATGGGTTCGTTTGTGTTGGTGGCCGCCAGTGAGATGGGGGACAAGACGCAGTTGCTCGCGTTCTC CCTGGCCACGCGGTTTCGCAAGCCGTGGCATGTGCTGGCGGGCATCTTCGTCGCCACCGTCGCCAATCACGCGCTGGCGT CCAGCGTGGGCAGTTGGGTGTCCGCGCACGTGCCGGCGAAGTGGATGGCGCTGCTCCTGGCGGTGCTCTTCATCGGCTTC GGTTTGTGGACGCTCAAGCCGGACACGCTGGATGAAGACGGAGGCAAGCCGCCGCGCTTCGGCGCTTTCCTCACCACGGT GGTGCTCTTCTTCCTCGCGGAGATGGGGGACAAGACGCAGTTGGCCACCATGGCCGTGGCCGCGCGTTATCAGGCGCCCA TCACGGTGACGCTGGGCACCACGGCCGGGATGATGCTGTCGGACGGCCTGGCTGTGTTCCTGGGGGACCGGCTCGCCGGG CGGGTGCAGATGAGTTGGGTGCGGTGGGCCGCCGCCAGCCTCTTCTTCATCTTCGGCGCCCTGTCGCTGTGGACGGCGCT CCGGATGTCCTGA
Upstream 100 bases:
>100_bases GATTGTCGTTTCTTCCTGGCCGAGGTCCGTCGTGTGCGCGTGCTGCCCTGGCGTCTCCCACGAATCTGAACCCCGGCCCT GTTGTTGCGAGGGAGTCGTC
Downstream 100 bases:
>100_bases CGGCTGGGACGCGCAGTGTGAATGAGGCGCTGTTACGGAGAAGTGTATTGCGCTTCATCACGGGAAAAGCTCCCATGTGA GAGGTCTGGGATGACCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MLEALMGSFVLVAASEMGDKTQLLAFSLATRFRKPWHVLAGIFVATVANHALASSVGSWVSAHVPAKWMALLLAVLFIGF GLWTLKPDTLDEDGGKPPRFGAFLTTVVLFFLAEMGDKTQLATMAVAARYQAPITVTLGTTAGMMLSDGLAVFLGDRLAG RVQMSWVRWAAASLFFIFGALSLWTALRMS
Sequences:
>Translated_190_residues MLEALMGSFVLVAASEMGDKTQLLAFSLATRFRKPWHVLAGIFVATVANHALASSVGSWVSAHVPAKWMALLLAVLFIGF GLWTLKPDTLDEDGGKPPRFGAFLTTVVLFFLAEMGDKTQLATMAVAARYQAPITVTLGTTAGMMLSDGLAVFLGDRLAG RVQMSWVRWAAASLFFIFGALSLWTALRMS >Mature_190_residues MLEALMGSFVLVAASEMGDKTQLLAFSLATRFRKPWHVLAGIFVATVANHALASSVGSWVSAHVPAKWMALLLAVLFIGF GLWTLKPDTLDEDGGKPPRFGAFLTTVVLFFLAEMGDKTQLATMAVAARYQAPITVTLGTTAGMMLSDGLAVFLGDRLAG RVQMSWVRWAAASLFFIFGALSLWTALRMS
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0016 (TC 9.B.26) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001727 [H]
Pfam domain/function: PF01169 UPF0016 [H]
EC number: NA
Molecular weight: Translated: 20460; Mature: 20460
Theoretical pI: Translated: 10.27; Mature: 10.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEALMGSFVLVAASEMGDKTQLLAFSLATRFRKPWHVLAGIFVATVANHALASSVGSWV CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAHVPAKWMALLLAVLFIGFGLWTLKPDTLDEDGGKPPRFGAFLTTVVLFFLAEMGDKTQ HHCCCHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH LATMAVAARYQAPITVTLGTTAGMMLSDGLAVFLGDRLAGRVQMSWVRWAAASLFFIFGA HHHHHHHHHHCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLWTALRMS HHHHHHHHCC >Mature Secondary Structure MLEALMGSFVLVAASEMGDKTQLLAFSLATRFRKPWHVLAGIFVATVANHALASSVGSWV CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH SAHVPAKWMALLLAVLFIGFGLWTLKPDTLDEDGGKPPRFGAFLTTVVLFFLAEMGDKTQ HHCCCHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHH LATMAVAARYQAPITVTLGTTAGMMLSDGLAVFLGDRLAGRVQMSWVRWAAASLFFIFGA HHHHHHHHHHCCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSLWTALRMS HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]