| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pabC [C]
Identifier: 108757092
GI number: 108757092
Start: 1863446
End: 1864270
Strand: Reverse
Name: pabC [C]
Synonym: MXAN_1588
Alternate gene names: 108757092
Gene position: 1864270-1863446 (Counterclockwise)
Preceding gene: 108760703
Following gene: 108757526
Centisome position: 20.4
GC content: 70.79
Gene sequence:
>825_bases ATGTTCTCCACGGTCGCGGTGGACGGTGAGGTACGGCGCTGGGAAGAACTGCACCTGCGGGACTTCGCGCAGGGCTTCTT CTTCGGCGCGGGCTTCTTCACCACCTTCCGCATCGAGGCCGGCGAGCCCTGGTTCCTCGCCCGGCACCTGGCGCGGCTGC GCGCGAGCCTGGCCGCCTTCCCCGGCGCCGTCCGCACGCCACCGTCGGAGCACCTCGCGAAAGCCGCGGTGCGCGAAGCG ATTGAGCGCTGCCTGCGAGCCGACGCCGCGATGGGCCCCGCGTTTCGAGGTGTGGGCAAGTTGTCGGCAAGTGATGGCCG GGTGCTGCTCACCTTCCGCGAGCACGCCCCAGACCTGGAGCGGATGCACCGCGAGGGACGGGCCCTGGACAGTCAGGAGC CGGGGGCATACCGCCGCGGCGAGCCCACGCTGAATCACAAGGGCCTCGCCTACTTCCGGCAGTTCAGTGTGATGGAGCGC CTGCCCCTGCTCGGCAATGAGGCCGGCGAGGTCTGCGAGCTGCCCACGGCCAACGTCTTCTTCCAGTGCGGTGGGGTACT CGTCACGCCGCCTCTGTCCGCGCCGTGTCTCCCCGGCATCATCCGCGAAGTGCTTCTGGAGGCCGGACATGTGGGGACGC TGCCCATCGTGGAGCGGCCTGTCTCGTTCGCCCAGCTCGCGCAGGTGAGCGCCTGCGTCTTCACCAACTCCGCCCAGGTG GCCACCGGTGTACCGAGCCTCCTCGGCCGGCCGCTCCCCACCAGCCTGGCGCTGGCACAGGGCATCCGGAGCCTCGTCGA GGCCGTCGCGGCGCGCGAGCGCTGA
Upstream 100 bases:
>100_bases AAGGCGTCCAGTTCCACCCCGAATCGTTCCTCACGCCCCAGGGGCCCCAACTGCTCGCCAACTTCCTGGAGCCGGCGCAC TGAGCGCACAGGAGGCCGCC
Downstream 100 bases:
>100_bases GGCCCACGCGGCGGATGCCTACGGCGCGGGTATCGCCTCGCGTCCGTCCACGGGAGTCGCGCGGCCCACGGGACGGATTT CCCAGACGGTGGACCAGTAG
Product: class IV aminotransferase
Products: p-aminobenzoate; L-glutamate; pyruvate; p-aminobenzoate [C]
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MFSTVAVDGEVRRWEELHLRDFAQGFFFGAGFFTTFRIEAGEPWFLARHLARLRASLAAFPGAVRTPPSEHLAKAAVREA IERCLRADAAMGPAFRGVGKLSASDGRVLLTFREHAPDLERMHREGRALDSQEPGAYRRGEPTLNHKGLAYFRQFSVMER LPLLGNEAGEVCELPTANVFFQCGGVLVTPPLSAPCLPGIIREVLLEAGHVGTLPIVERPVSFAQLAQVSACVFTNSAQV ATGVPSLLGRPLPTSLALAQGIRSLVEAVAARER
Sequences:
>Translated_274_residues MFSTVAVDGEVRRWEELHLRDFAQGFFFGAGFFTTFRIEAGEPWFLARHLARLRASLAAFPGAVRTPPSEHLAKAAVREA IERCLRADAAMGPAFRGVGKLSASDGRVLLTFREHAPDLERMHREGRALDSQEPGAYRRGEPTLNHKGLAYFRQFSVMER LPLLGNEAGEVCELPTANVFFQCGGVLVTPPLSAPCLPGIIREVLLEAGHVGTLPIVERPVSFAQLAQVSACVFTNSAQV ATGVPSLLGRPLPTSLALAQGIRSLVEAVAARER >Mature_274_residues MFSTVAVDGEVRRWEELHLRDFAQGFFFGAGFFTTFRIEAGEPWFLARHLARLRASLAAFPGAVRTPPSEHLAKAAVREA IERCLRADAAMGPAFRGVGKLSASDGRVLLTFREHAPDLERMHREGRALDSQEPGAYRRGEPTLNHKGLAYFRQFSVMER LPLLGNEAGEVCELPTANVFFQCGGVLVTPPLSAPCLPGIIREVLLEAGHVGTLPIVERPVSFAQLAQVSACVFTNSAQV ATGVPSLLGRPLPTSLALAQGIRSLVEAVAARER
Specific function: Converts 4-Amino-4-Deoxychorismate Into 4-Aminobenzoate (Paba) And Pyruvate. [C]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.3.38 [C]
Molecular weight: Translated: 29739; Mature: 29739
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSTVAVDGEVRRWEELHLRDFAQGFFFGAGFFTTFRIEAGEPWFLARHLARLRASLAAF CCCEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHC PGAVRTPPSEHLAKAAVREAIERCLRADAAMGPAFRGVGKLSASDGRVLLTFREHAPDLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEHHCCCCHH RMHREGRALDSQEPGAYRRGEPTLNHKGLAYFRQFSVMERLPLLGNEAGEVCELPTANVF HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHH FQCGGVLVTPPLSAPCLPGIIREVLLEAGHVGTLPIVERPVSFAQLAQVSACVFTNSAQV EECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHH ATGVPSLLGRPLPTSLALAQGIRSLVEAVAARER HHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFSTVAVDGEVRRWEELHLRDFAQGFFFGAGFFTTFRIEAGEPWFLARHLARLRASLAAF CCCEEECCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHC PGAVRTPPSEHLAKAAVREAIERCLRADAAMGPAFRGVGKLSASDGRVLLTFREHAPDLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEEEHHCCCCHH RMHREGRALDSQEPGAYRRGEPTLNHKGLAYFRQFSVMERLPLLGNEAGEVCELPTANVF HHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHH FQCGGVLVTPPLSAPCLPGIIREVLLEAGHVGTLPIVERPVSFAQLAQVSACVFTNSAQV EECCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCHH ATGVPSLLGRPLPTSLALAQGIRSLVEAVAARER HHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: Pyridoxal Phosphate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-glutamine; chorismate; 4-amino-4-deoxychorismate [C]
Specific reaction: L-glutamine + chorismate = p-aminobenzoate + L-glutamate + pyruvate 4-amino-4-deoxychorismate = p-aminobenzoate + pyruvate [C]
General reaction: Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA