| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108757057
Identifier: 108757057
GI number: 108757057
Start: 165082
End: 166935
Strand: Reverse
Name: 108757057
Synonym: MXAN_0141
Alternate gene names: NA
Gene position: 166935-165082 (Counterclockwise)
Preceding gene: 108758069
Following gene: 108758657
Centisome position: 1.83
GC content: 73.19
Gene sequence:
>1854_bases GTGACGACCGCCACCCGACACCCCGTCGAGCTGCGCTACGCCACCGCGAGCGACGTCGAGTCCGGCGCGGACGACTCCCG CGTCCGCCTGGCCCTGGAGGGCTCGCGCGGCACCGTGGGCGTGAGCGGCCGCGTCACCGACGCCGCCCTCTTCCGCGACG CGCTGGCCGCCACCTTCGGCATCCTCGCCAGCGACTTGCGCTACCGGGGCAAGGACCGCACCGCGTACCTCGCCTACCTG ATGAAGCAGGGCAAGCGGGCAAGCGCGCTCATCTGGGAGGCGCAGAAGGCGTTCCTGGACAACGCGCTGGACGGCGAGAA GAAGCAGGACGCGGTGCTGGACCCCGTGCTCACGGTGGATCCAGACAGCGTGTCCCTGGAGGTCTTCTCCCGCGACGAGA GCGCCTACGCCCGGCTGTCCTTCGACAACCGCCTCTTCGAGGGCCGCGAGGCCGCGCACGGCTCCACCTTCCTGGACGTG CCGCCGGAGCTGCCCGCCCGCGTGGACCGGCTGCGCACCTACGTGCCCGTCTCCCTGGAGGCGCACGTCGCGCTGGCCAC GCCGGCCTCGCAGCCGCCCCGCGCCCCGCGCAACGTGGAGGTGCCCCACGCCTGGCTGCGCGGCTTCCTCCAGGTGCAGT CCGCCGCCACGCTGCCCGCGAGCACCTGCGAGCTGGCGCCCATCGACCTCTACAACCTCCTCTTCGCCCTGCGCGCTCGC AAGGCGAAGAAGGCCCCCCGCGCGCTGCGCTTCGAGCTGGTGCCCGGCGCCCCGCCCCGGCTGGTGCTGGAGCCGTGGGA GCTGGTGCTGGAGTGCCACGGCGGCACGTACAACGGCACCGCGCCCGCGGTGGTGCGCACCTTCGGCCGTCAGCGCCTGG CCGCGCTCGCGCGCCTGCTGCCCCACGCGAAGTCGGTGCGGGTGCAGCTCATGGGCCCCGGCCTGCCGGTGTTCTGGGTC ATCGACATGGGCGCGGCCACGCTCACGCTGGGCCTCACGGGCTGGACGGAGAGCGGCTGGTCCTCCGCCGCGGCCTTCGA CGTGCTGATGCCCCGCGCGGTGCCGGACGGATTGGCGGAGCAGCTTCGCAACCGACTGCGGACCGAAGGTCCCCTGCCCT TCGACACGCTCGCCGCCAATGCCGGCGCGCCCAAGGAGTCCGTGCGCGCGGCGCTCCAACTGGAGTGCCTGCGCGGACGC ATCCTCTTCGACGTGGCGCGCGGCCAGTACCGTCCGCGCGAGCTGATGCCCACGCCGGTGGACGCCGCCGTCATCCGCTA CGGCAACGAGCTGGAAGCACGGGCGCACCGCCTGCTGGGCGGCGACGGCGCTCCGGGCGCGGGCGAGGTGAAGCTGACCA AGGTGCACGACGTGGTGGGAGAGGGCATCCGCATCCACGGCGAGGTGGTGGACCGCGAGGCCCTGCGCAGCTTCTTCCCC AGCTTCACGTTGGATTTGGAAGGCCGCGTGAAGGACGCCAGCTGCGGGTGTCCGCACCACCGGCGCTCCGGCCTGAGGGA AGGCCCCTGCGAGCACCTGCTGGCGTTGCGGCTGGCCTACGCGCGCCGCCGCGCGGAGGAAGAGGCGCTGCGGCAGACGC CCGAGGGCCGCAAGCTCATCCGCGCGGAGACGCGCTCCTACGTGCGGCGCGACGCGGAGAGCGGCCTGGAGACGGTGTAC CGGGTTTCCCTGGATGGTCAGGTGGTGGCGGTGGAGTGGGGCCCGCGCACGGGCTCGCCGCGTCACCAGCGGCTCTGGTT CGACTCGGATGCGGAAGCGCGCGGAGCGTACTTCGCGCGCCTGGAGAAGTTGGCGGCTGACGGCTACATCGACGCGGCCT CGGCATTGGTGTAA
Upstream 100 bases:
>100_bases AGTCGCAAACCGAGGAGCTGCGCAAGGCCGCCTGGCGCGCCCACAAACGTGCACGCCGGGCCGCTGAGCGCGCCCGGAAC CGGAAGGAAGGGAACCCGTC
Downstream 100 bases:
>100_bases ACCCTTCAACCACGGCTCGGCCGCCACGCGCGGCCGGCAGGACAGGTGCGACGAAGAGACGACGACGTGCGCTTCACGCG CGAGCAGCCGAGAGAGGTCC
Product: SWIM zinc finger domain-containing protein
Products: NA
Alternate protein names: Zinc Finger SWIM Domain-Containing Protein; Swim Zinc Finger Domain Protein; Zinc Finger SWIM Domain Protein; Zinc Finger SWIM-Type
Number of amino acids: Translated: 617; Mature: 616
Protein sequence:
>617_residues MTTATRHPVELRYATASDVESGADDSRVRLALEGSRGTVGVSGRVTDAALFRDALAATFGILASDLRYRGKDRTAYLAYL MKQGKRASALIWEAQKAFLDNALDGEKKQDAVLDPVLTVDPDSVSLEVFSRDESAYARLSFDNRLFEGREAAHGSTFLDV PPELPARVDRLRTYVPVSLEAHVALATPASQPPRAPRNVEVPHAWLRGFLQVQSAATLPASTCELAPIDLYNLLFALRAR KAKKAPRALRFELVPGAPPRLVLEPWELVLECHGGTYNGTAPAVVRTFGRQRLAALARLLPHAKSVRVQLMGPGLPVFWV IDMGAATLTLGLTGWTESGWSSAAAFDVLMPRAVPDGLAEQLRNRLRTEGPLPFDTLAANAGAPKESVRAALQLECLRGR ILFDVARGQYRPRELMPTPVDAAVIRYGNELEARAHRLLGGDGAPGAGEVKLTKVHDVVGEGIRIHGEVVDREALRSFFP SFTLDLEGRVKDASCGCPHHRRSGLREGPCEHLLALRLAYARRRAEEEALRQTPEGRKLIRAETRSYVRRDAESGLETVY RVSLDGQVVAVEWGPRTGSPRHQRLWFDSDAEARGAYFARLEKLAADGYIDAASALV
Sequences:
>Translated_617_residues MTTATRHPVELRYATASDVESGADDSRVRLALEGSRGTVGVSGRVTDAALFRDALAATFGILASDLRYRGKDRTAYLAYL MKQGKRASALIWEAQKAFLDNALDGEKKQDAVLDPVLTVDPDSVSLEVFSRDESAYARLSFDNRLFEGREAAHGSTFLDV PPELPARVDRLRTYVPVSLEAHVALATPASQPPRAPRNVEVPHAWLRGFLQVQSAATLPASTCELAPIDLYNLLFALRAR KAKKAPRALRFELVPGAPPRLVLEPWELVLECHGGTYNGTAPAVVRTFGRQRLAALARLLPHAKSVRVQLMGPGLPVFWV IDMGAATLTLGLTGWTESGWSSAAAFDVLMPRAVPDGLAEQLRNRLRTEGPLPFDTLAANAGAPKESVRAALQLECLRGR ILFDVARGQYRPRELMPTPVDAAVIRYGNELEARAHRLLGGDGAPGAGEVKLTKVHDVVGEGIRIHGEVVDREALRSFFP SFTLDLEGRVKDASCGCPHHRRSGLREGPCEHLLALRLAYARRRAEEEALRQTPEGRKLIRAETRSYVRRDAESGLETVY RVSLDGQVVAVEWGPRTGSPRHQRLWFDSDAEARGAYFARLEKLAADGYIDAASALV >Mature_616_residues TTATRHPVELRYATASDVESGADDSRVRLALEGSRGTVGVSGRVTDAALFRDALAATFGILASDLRYRGKDRTAYLAYLM KQGKRASALIWEAQKAFLDNALDGEKKQDAVLDPVLTVDPDSVSLEVFSRDESAYARLSFDNRLFEGREAAHGSTFLDVP PELPARVDRLRTYVPVSLEAHVALATPASQPPRAPRNVEVPHAWLRGFLQVQSAATLPASTCELAPIDLYNLLFALRARK AKKAPRALRFELVPGAPPRLVLEPWELVLECHGGTYNGTAPAVVRTFGRQRLAALARLLPHAKSVRVQLMGPGLPVFWVI DMGAATLTLGLTGWTESGWSSAAAFDVLMPRAVPDGLAEQLRNRLRTEGPLPFDTLAANAGAPKESVRAALQLECLRGRI LFDVARGQYRPRELMPTPVDAAVIRYGNELEARAHRLLGGDGAPGAGEVKLTKVHDVVGEGIRIHGEVVDREALRSFFPS FTLDLEGRVKDASCGCPHHRRSGLREGPCEHLLALRLAYARRRAEEEALRQTPEGRKLIRAETRSYVRRDAESGLETVYR VSLDGQVVAVEWGPRTGSPRHQRLWFDSDAEARGAYFARLEKLAADGYIDAASALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67542; Mature: 67411
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS50966 ZF_SWIM ; PS00063 ALDOKETO_REDUCTASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTATRHPVELRYATASDVESGADDSRVRLALEGSRGTVGVSGRVTDAALFRDALAATFG CCCCCCCCEEEEEECHHCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHH ILASDLRYRGKDRTAYLAYLMKQGKRASALIWEAQKAFLDNALDGEKKQDAVLDPVLTVD HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEC PDSVSLEVFSRDESAYARLSFDNRLFEGREAAHGSTFLDVPPELPARVDRLRTYVPVSLE CCCEEEEEEECCCCCEEEEECCCHHHCCCCCCCCCEEECCCCCCHHHHHHHHHCCCEEEE AHVALATPASQPPRAPRNVEVPHAWLRGFLQVQSAATLPASTCELAPIDLYNLLFALRAR EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH KAKKAPRALRFELVPGAPPRLVLEPWELVLECHGGTYNGTAPAVVRTFGRQRLAALARLL HHHCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC PHAKSVRVQLMGPGLPVFWVIDMGAATLTLGLTGWTESGWSSAAAFDVLMPRAVPDGLAE CCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHH QLRNRLRTEGPLPFDTLAANAGAPKESVRAALQLECLRGRILFDVARGQYRPRELMPTPV HHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHCCCCCC DAAVIRYGNELEARAHRLLGGDGAPGAGEVKLTKVHDVVGEGIRIHGEVVDREALRSFFP CHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCCEEEEHHHHHHHHHHHHCC SFTLDLEGRVKDASCGCPHHRRSGLREGPCEHLLALRLAYARRRAEEEALRQTPEGRKLI CEEEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RAETRSYVRRDAESGLETVYRVSLDGQVVAVEWGPRTGSPRHQRLWFDSDAEARGAYFAR HHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHH LEKLAADGYIDAASALV HHHHHHCCCCCHHHHCC >Mature Secondary Structure TTATRHPVELRYATASDVESGADDSRVRLALEGSRGTVGVSGRVTDAALFRDALAATFG CCCCCCCEEEEEECHHCCCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHH ILASDLRYRGKDRTAYLAYLMKQGKRASALIWEAQKAFLDNALDGEKKQDAVLDPVLTVD HHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEC PDSVSLEVFSRDESAYARLSFDNRLFEGREAAHGSTFLDVPPELPARVDRLRTYVPVSLE CCCEEEEEEECCCCCEEEEECCCHHHCCCCCCCCCEEECCCCCCHHHHHHHHHCCCEEEE AHVALATPASQPPRAPRNVEVPHAWLRGFLQVQSAATLPASTCELAPIDLYNLLFALRAR EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH KAKKAPRALRFELVPGAPPRLVLEPWELVLECHGGTYNGTAPAVVRTFGRQRLAALARLL HHHCCCCEEEEEECCCCCCCEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC PHAKSVRVQLMGPGLPVFWVIDMGAATLTLGLTGWTESGWSSAAAFDVLMPRAVPDGLAE CCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCHHHHH QLRNRLRTEGPLPFDTLAANAGAPKESVRAALQLECLRGRILFDVARGQYRPRELMPTPV HHHHHHCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHCCCCCC DAAVIRYGNELEARAHRLLGGDGAPGAGEVKLTKVHDVVGEGIRIHGEVVDREALRSFFP CHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHCCCEEEEHHHHHHHHHHHHCC SFTLDLEGRVKDASCGCPHHRRSGLREGPCEHLLALRLAYARRRAEEEALRQTPEGRKLI CEEEEECCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH RAETRSYVRRDAESGLETVYRVSLDGQVVAVEWGPRTGSPRHQRLWFDSDAEARGAYFAR HHHHHHHHHHHHHHHHHEEEEEECCCEEEEEEECCCCCCCCCCEEEECCCCCHHHHHHHH LEKLAADGYIDAASALV HHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA