| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is pepP [H]
Identifier: 108757035
GI number: 108757035
Start: 525874
End: 527277
Strand: Direct
Name: pepP [H]
Synonym: MXAN_0463
Alternate gene names: 108757035
Gene position: 525874-527277 (Clockwise)
Preceding gene: 108761939
Following gene: 108760883
Centisome position: 5.75
GC content: 72.08
Gene sequence:
>1404_bases ATGCTGCTCCCTTCCGTTTCCGAGCGCTCCGCTCTCACCCGACGGCGGGAGCAGCTGGCGAAAGCCCTGGGGAGCGCGGC CGCGCTGCTGGCGTCGAGCCGCCCCCGTCCTCGCAACTACGCCGCCGACCAGTTCCCTTTTCGGGCGTCGAGCCACTTCC TCTACCTCTTCGGGCTCGCGACGCCGGACGGCGTGGGTCTGTATGACGGCCAGGGCTGGACGCTGTACCTGCCCGAGCCC GGTCCCGACGACGCGCTGTGGGACGGCGCGGTGCCCGGCTTCGCTGAAATCGCGGAGCGGACGGGCTGCACCGTGCGTTC GCGCGCCGAGCTGCCCGCGGCGCTGAAGGGCCGCGACGTGGCGGCGCTGCCCACGCCGGACCTGGAGACGTGCCTGGACG TGGCCGCGCTGCTGGGCCGCGAGGTGCGTCCCGGCCACCTGGCGGCGGTGGACGTGCCGCTGGCGGACGCGATGATTGCG CTGCGGCTTCGCCATGACGACGCCGCGCAGGCGCAGCTTCGTCAGGCCGCGGAAGTCACGGTGCTGGCCCACATGGCGGG CATGCGCGCCACGCGGCCGGGCATCCTGGAGGCCGCGGTGCGCGCCGCGATGGAGGCGGAGTTCGTCTCGCGCGACGTGC GGCCGGCGTATCAGCCCATCGTCACCGTGCACGGCGAGGTGCTGCACAACCTGCGCTATGACCACACGCTGCGCGAGGGA GACCTGCTGCTGGCGGACGTGGGTGGTGAAAGCCCGGCCGGCTTCGCCTGTGACGTGACGCGCACGTGGCCGGTGACGGG CCGCTTCAGCACGACGCAGCGCGAGCTGTACGACGTCGTGCTGCGCATGCAGAAAGCCAGCATCGACGCGGTCCAGCCGG GGACGCGCTACCGCGACGTGCACCTGGCCGCGCACCGGGAGATGGCGCGAGGCCTGGTGGCGTTGGGCATCCTCCGTGGG GACCCGGAGGAGTTGGTGGTGGACGGCGTCACCGCGCTCTTCTTCCCGCACGGCGTGGGCCACCTGCTGGGGCTGGACGT GCATGACATGGAGGACCTGGGGGACCGGGCGGGCTATGCGCCGGGCCGCACGCGCTCGCCGGAGTTCGGTCACCGCTCGC TGCGGTTGGACCGCGATTTGGAGCCCGGCATGGCGGTGACGATTGAGCCGGGCATGTACCAGGTGCCCGCCATCCTGTCG GACGCGCGGCTCATGGCGCGCGCGAAGGACAGGCTCCAGCGCGACGTGCTGGCGCGCTACGCGGACGTGCGCGGCATCCG CATCGAGGACGACGTGCTCGTCACTTCGGATGGCAACGAGGTGCTTACCGCCGCCATCCCCAAGGAGGCCTCGGACATCG AGGCCGTCATGACCAGCTCTGCCCGTCCAGCTCCGGGAAGGTGA
Upstream 100 bases:
>100_bases CGCCGTCTTCCGCAAGGGCGGCCACTTCGACGACCTGCTGGCCTTCCTTTTCAAGCTGTTGCCCCAGCGCCCGCTGGGTG CCTGAACGCGAGGTTCCAGA
Downstream 100 bases:
>100_bases CCTGGCACTGGCCGGGATTCACGCCGTCCACGCGCGCGTAGCCATTCTTGTTGAGGGTGCCCTCGCGCGTACTCCCATCC GGGAGCGTCACCAGGTAGCG
Product: Xaa-Pro aminopeptidase
Products: NA
Alternate protein names: Aminoacylproline aminopeptidase; Aminopeptidase P II; APP-II; X-Pro aminopeptidase [H]
Number of amino acids: Translated: 467; Mature: 467
Protein sequence:
>467_residues MLLPSVSERSALTRRREQLAKALGSAAALLASSRPRPRNYAADQFPFRASSHFLYLFGLATPDGVGLYDGQGWTLYLPEP GPDDALWDGAVPGFAEIAERTGCTVRSRAELPAALKGRDVAALPTPDLETCLDVAALLGREVRPGHLAAVDVPLADAMIA LRLRHDDAAQAQLRQAAEVTVLAHMAGMRATRPGILEAAVRAAMEAEFVSRDVRPAYQPIVTVHGEVLHNLRYDHTLREG DLLLADVGGESPAGFACDVTRTWPVTGRFSTTQRELYDVVLRMQKASIDAVQPGTRYRDVHLAAHREMARGLVALGILRG DPEELVVDGVTALFFPHGVGHLLGLDVHDMEDLGDRAGYAPGRTRSPEFGHRSLRLDRDLEPGMAVTIEPGMYQVPAILS DARLMARAKDRLQRDVLARYADVRGIRIEDDVLVTSDGNEVLTAAIPKEASDIEAVMTSSARPAPGR
Sequences:
>Translated_467_residues MLLPSVSERSALTRRREQLAKALGSAAALLASSRPRPRNYAADQFPFRASSHFLYLFGLATPDGVGLYDGQGWTLYLPEP GPDDALWDGAVPGFAEIAERTGCTVRSRAELPAALKGRDVAALPTPDLETCLDVAALLGREVRPGHLAAVDVPLADAMIA LRLRHDDAAQAQLRQAAEVTVLAHMAGMRATRPGILEAAVRAAMEAEFVSRDVRPAYQPIVTVHGEVLHNLRYDHTLREG DLLLADVGGESPAGFACDVTRTWPVTGRFSTTQRELYDVVLRMQKASIDAVQPGTRYRDVHLAAHREMARGLVALGILRG DPEELVVDGVTALFFPHGVGHLLGLDVHDMEDLGDRAGYAPGRTRSPEFGHRSLRLDRDLEPGMAVTIEPGMYQVPAILS DARLMARAKDRLQRDVLARYADVRGIRIEDDVLVTSDGNEVLTAAIPKEASDIEAVMTSSARPAPGR >Mature_467_residues MLLPSVSERSALTRRREQLAKALGSAAALLASSRPRPRNYAADQFPFRASSHFLYLFGLATPDGVGLYDGQGWTLYLPEP GPDDALWDGAVPGFAEIAERTGCTVRSRAELPAALKGRDVAALPTPDLETCLDVAALLGREVRPGHLAAVDVPLADAMIA LRLRHDDAAQAQLRQAAEVTVLAHMAGMRATRPGILEAAVRAAMEAEFVSRDVRPAYQPIVTVHGEVLHNLRYDHTLREG DLLLADVGGESPAGFACDVTRTWPVTGRFSTTQRELYDVVLRMQKASIDAVQPGTRYRDVHLAAHREMARGLVALGILRG DPEELVVDGVTALFFPHGVGHLLGLDVHDMEDLGDRAGYAPGRTRSPEFGHRSLRLDRDLEPGMAVTIEPGMYQVPAILS DARLMARAKDRLQRDVLARYADVRGIRIEDDVLVTSDGNEVLTAAIPKEASDIEAVMTSSARPAPGR
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
Organism=Homo sapiens, GI149589008, Length=467, Percent_Identity=31.4775160599572, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI260593665, Length=308, Percent_Identity=35.7142857142857, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI260593663, Length=463, Percent_Identity=30.0215982721382, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI11559925, Length=465, Percent_Identity=28.8172043010753, Blast_Score=151, Evalue=2e-36, Organism=Escherichia coli, GI1789275, Length=472, Percent_Identity=31.9915254237288, Blast_Score=197, Evalue=2e-51, Organism=Escherichia coli, GI1790282, Length=281, Percent_Identity=33.0960854092527, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1788728, Length=228, Percent_Identity=28.5087719298246, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17508215, Length=477, Percent_Identity=30.6079664570231, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI71989583, Length=251, Percent_Identity=28.2868525896414, Blast_Score=78, Evalue=9e-15, Organism=Saccharomyces cerevisiae, GI6321118, Length=471, Percent_Identity=28.0254777070064, Blast_Score=166, Evalue=7e-42, Organism=Saccharomyces cerevisiae, GI6320922, Length=473, Percent_Identity=24.9471458773784, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI21357079, Length=460, Percent_Identity=29.3478260869565, Blast_Score=169, Evalue=3e-42, Organism=Drosophila melanogaster, GI19920384, Length=450, Percent_Identity=28.4444444444444, Blast_Score=121, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR007865 - InterPro: IPR001131 [H]
Pfam domain/function: PF05195 AMP_N; PF00557 Peptidase_M24 [H]
EC number: =3.4.11.9 [H]
Molecular weight: Translated: 50608; Mature: 50608
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00491 PROLINE_PEPTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLPSVSERSALTRRREQLAKALGSAAALLASSRPRPRNYAADQFPFRASSHFLYLFGLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEC TPDGVGLYDGQGWTLYLPEPGPDDALWDGAVPGFAEIAERTGCTVRSRAELPAALKGRDV CCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCHHHCCCCE AALPTPDLETCLDVAALLGREVRPGHLAAVDVPLADAMIALRLRHDDAAQAQLRQAAEVT EECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHEEEEEECCCCHHHHHHHHHHHHH VLAHMAGMRATRPGILEAAVRAAMEAEFVSRDVRPAYQPIVTVHGEVLHNLRYDHTLREG HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC DLLLADVGGESPAGFACDVTRTWPVTGRFSTTQRELYDVVLRMQKASIDAVQPGTRYRDV CEEEEECCCCCCCCEEEECCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHH HLAAHREMARGLVALGILRGDPEELVVDGVTALFFPHGVGHLLGLDVHDMEDLGDRAGYA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCC PGRTRSPEFGHRSLRLDRDLEPGMAVTIEPGMYQVPAILSDARLMARAKDRLQRDVLARY CCCCCCCCCCCCCEEECCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH ADVRGIRIEDDVLVTSDGNEVLTAAIPKEASDIEAVMTSSARPAPGR HHCCCEEEECCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLLPSVSERSALTRRREQLAKALGSAAALLASSRPRPRNYAADQFPFRASSHFLYLFGLA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEC TPDGVGLYDGQGWTLYLPEPGPDDALWDGAVPGFAEIAERTGCTVRSRAELPAALKGRDV CCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCEECCCCCCHHHCCCCE AALPTPDLETCLDVAALLGREVRPGHLAAVDVPLADAMIALRLRHDDAAQAQLRQAAEVT EECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCHHHHEEEEEECCCCHHHHHHHHHHHHH VLAHMAGMRATRPGILEAAVRAAMEAEFVSRDVRPAYQPIVTVHGEVLHNLRYDHTLREG HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC DLLLADVGGESPAGFACDVTRTWPVTGRFSTTQRELYDVVLRMQKASIDAVQPGTRYRDV CEEEEECCCCCCCCEEEECCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEHH HLAAHREMARGLVALGILRGDPEELVVDGVTALFFPHGVGHLLGLDVHDMEDLGDRAGYA HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHCCCC PGRTRSPEFGHRSLRLDRDLEPGMAVTIEPGMYQVPAILSDARLMARAKDRLQRDVLARY CCCCCCCCCCCCCEEECCCCCCCCEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH ADVRGIRIEDDVLVTSDGNEVLTAAIPKEASDIEAVMTSSARPAPGR HHCCCEEEECCEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2659585; 1339425; 9278503; 9520390 [H]