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The map label for this gene is aidB [H]

Identifier: 108757033

GI number: 108757033

Start: 4843943

End: 4845604

Strand: Direct

Name: aidB [H]

Synonym: MXAN_3978

Alternate gene names: 108757033

Gene position: 4843943-4845604 (Clockwise)

Preceding gene: 108763370

Following gene: 108761639

Centisome position: 53.0

GC content: 70.58

Gene sequence:

>1662_bases
ATGAGTTTCTTCCAGGACCCGCCGAGGCTGGGCAATCAGTACGACGACGATGCGCTGCTCCAGAGCTACCTGGCACGCAC
CCTCCCCGAGGACCTGCGGCGCGCGCTGACGGATGAGTTCCGCGAGTTGGGAGAGCTGGGCGGGGATTACTTCTACCGCT
TCCAGCTCCGCGACCGGCTGAACGAGCCGGAGCTGACCCAGTGGGATGCGTGGGGCCAGCGCGTCGACCACATCGAGGTG
TCGCCGCTGTGGAAGGAAGCCGAGTCCCTGGCCGCGCGGCGCGGACTGGTGGCCACGGCCTACGAGCAGAAGAACGCCGA
GCTCAGCCGCGTCCACCAGTTCATCCTCAACTACCTCGTGCAGGCGTCGCTGGACGTGTACTCGTGCCCGCTGGCGATGA
CGGACGGCGCGGCGCGCTCGTTGCTCACGCTGGGCAATACGGCGCTCATCGACCGCGCCCTGCCCCACCTGACGTCCCGG
GACCCGGCCACGGCGTGGACGTCCGGTCAGTGGATGACGGAGCGCACCGGCGGCTCGGACGTGGGCCTCACGCAGACGGT
GGCCCGGCAGACCCCGGAGGGCTGGCGGCTGTCTGGAACGAAGTGGTTCACCTCCGCGACGACGGCGCAGATGGCGCTCA
CGCTGGCGCGTCCGGAAGGCAACGGCCCCGGCGGCAAGGGCCTGGCCCTGTTCTACGTGGAGACACGGGACGCGGCCGGA
AGACTCAATGGCATCCAGATCAACCGGCTCAAAGACAAACTCGGAACGCGCAAGGTGCCCACGGCGGAGCTGACCTTGGA
TGGCGCGCTGGCCATTCCCGTGGCGGGGCTGACGGATGGCATCCGGAACATGGCGTGGATGCTGAATGTGACACGCACCT
GGAACGCGGTGGGCTCCGCATGGGCCATGCGCCGGGCGCTGGCCCTGGCCCGGGACTACGCCCAGCGGCGGGTGCAGTTC
GGCGCGAAGCTGGCGGACAAGCCGCTGCACATGGACACCCTGGCGGGGCTGGAGGCGGAGTTTCAAGCGGGGTTCCTGCT
GGCCTTCCGCGCCGTGGAGCTGCTGGGCCGCATGGAGGCGAAGGCGGCCACCGAGCAGGAGCTGCTCCTGCAGCGGCTGG
TGACGCCCCTGGCGAAGCTGACCACCGGCCGGCAGGTGGTGCACGTCACCTCCGAAGTCACGGAGGCCTTCGGCGGCGCG
GGCTACGTGGAAGACACGGGCATTCCGCGGATCCAGGCCGACGCCCAGGTGCTGTCCATCTGGGAAGGCACCACGAACGT
CCTCTCCCTGGACACCCTGCGCGCCCTGGCGAAGGAAGGCGCGTTGGAGGCGTTCTTCCACGAGGTGGAGGGCCGTCTGG
GCCAGACCCGGGACGCGGGCCTGCGGCCCTGTGTCGACGCGGCCCAGGGCGCGCTGGAGCACGCGCGGGCCTGGGTGGCC
GGTGCCATGGAGGACCCCGCCACCCTGGAGGCTGGCGCCCGGCGCTTCTCGCTGACGCTGGGACGGACGCTGGAGCTGGC
CTTGCTCTGCGCCCATGCGCAGTGGTGCCTGGACCATGGCCACGGCCCCCGGAGCAAGGCGGCGGCACGGCGCTTCGCCT
CGCACGGCGTGGACCTCATCCAACCGGCCGCGAGCCTGGAGGATGTCCGGCTCCTGGCCTGA

Upstream 100 bases:

>100_bases
GCAGCCGTAGACCGCCAGGCGGCATCACCCACGTTCCGGCCCGAATACCCTCGCACTGTGAGACGCGCCCGGACCGGAAC
ATGGGTGCTACCCTTTGCGC

Downstream 100 bases:

>100_bases
GGTGCCACGTCTGGCAGCGGCCCGAAACAACACGACGCACCAAGACACCCTCAATCATTTACACGCAATTCCTATCCCAG
GGGCCGCCCTGCCCCTCCCT

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 553; Mature: 552

Protein sequence:

>553_residues
MSFFQDPPRLGNQYDDDALLQSYLARTLPEDLRRALTDEFRELGELGGDYFYRFQLRDRLNEPELTQWDAWGQRVDHIEV
SPLWKEAESLAARRGLVATAYEQKNAELSRVHQFILNYLVQASLDVYSCPLAMTDGAARSLLTLGNTALIDRALPHLTSR
DPATAWTSGQWMTERTGGSDVGLTQTVARQTPEGWRLSGTKWFTSATTAQMALTLARPEGNGPGGKGLALFYVETRDAAG
RLNGIQINRLKDKLGTRKVPTAELTLDGALAIPVAGLTDGIRNMAWMLNVTRTWNAVGSAWAMRRALALARDYAQRRVQF
GAKLADKPLHMDTLAGLEAEFQAGFLLAFRAVELLGRMEAKAATEQELLLQRLVTPLAKLTTGRQVVHVTSEVTEAFGGA
GYVEDTGIPRIQADAQVLSIWEGTTNVLSLDTLRALAKEGALEAFFHEVEGRLGQTRDAGLRPCVDAAQGALEHARAWVA
GAMEDPATLEAGARRFSLTLGRTLELALLCAHAQWCLDHGHGPRSKAAARRFASHGVDLIQPAASLEDVRLLA

Sequences:

>Translated_553_residues
MSFFQDPPRLGNQYDDDALLQSYLARTLPEDLRRALTDEFRELGELGGDYFYRFQLRDRLNEPELTQWDAWGQRVDHIEV
SPLWKEAESLAARRGLVATAYEQKNAELSRVHQFILNYLVQASLDVYSCPLAMTDGAARSLLTLGNTALIDRALPHLTSR
DPATAWTSGQWMTERTGGSDVGLTQTVARQTPEGWRLSGTKWFTSATTAQMALTLARPEGNGPGGKGLALFYVETRDAAG
RLNGIQINRLKDKLGTRKVPTAELTLDGALAIPVAGLTDGIRNMAWMLNVTRTWNAVGSAWAMRRALALARDYAQRRVQF
GAKLADKPLHMDTLAGLEAEFQAGFLLAFRAVELLGRMEAKAATEQELLLQRLVTPLAKLTTGRQVVHVTSEVTEAFGGA
GYVEDTGIPRIQADAQVLSIWEGTTNVLSLDTLRALAKEGALEAFFHEVEGRLGQTRDAGLRPCVDAAQGALEHARAWVA
GAMEDPATLEAGARRFSLTLGRTLELALLCAHAQWCLDHGHGPRSKAAARRFASHGVDLIQPAASLEDVRLLA
>Mature_552_residues
SFFQDPPRLGNQYDDDALLQSYLARTLPEDLRRALTDEFRELGELGGDYFYRFQLRDRLNEPELTQWDAWGQRVDHIEVS
PLWKEAESLAARRGLVATAYEQKNAELSRVHQFILNYLVQASLDVYSCPLAMTDGAARSLLTLGNTALIDRALPHLTSRD
PATAWTSGQWMTERTGGSDVGLTQTVARQTPEGWRLSGTKWFTSATTAQMALTLARPEGNGPGGKGLALFYVETRDAAGR
LNGIQINRLKDKLGTRKVPTAELTLDGALAIPVAGLTDGIRNMAWMLNVTRTWNAVGSAWAMRRALALARDYAQRRVQFG
AKLADKPLHMDTLAGLEAEFQAGFLLAFRAVELLGRMEAKAATEQELLLQRLVTPLAKLTTGRQVVHVTSEVTEAFGGAG
YVEDTGIPRIQADAQVLSIWEGTTNVLSLDTLRALAKEGALEAFFHEVEGRLGQTRDAGLRPCVDAAQGALEHARAWVAG
AMEDPATLEAGARRFSLTLGRTLELALLCAHAQWCLDHGHGPRSKAAARRFASHGVDLIQPAASLEDVRLLA

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557235, Length=303, Percent_Identity=25.7425742574257, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI76496475, Length=303, Percent_Identity=25.7425742574257, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI4557233, Length=327, Percent_Identity=26.9113149847095, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI7656849, Length=306, Percent_Identity=24.8366013071895, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI4501859, Length=319, Percent_Identity=26.6457680250784, Blast_Score=73, Evalue=7e-13,
Organism=Escherichia coli, GI87082384, Length=409, Percent_Identity=33.0073349633252, Blast_Score=179, Evalue=4e-46,
Organism=Caenorhabditis elegans, GI86563381, Length=528, Percent_Identity=42.6136363636364, Blast_Score=382, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI86563383, Length=528, Percent_Identity=42.6136363636364, Blast_Score=382, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17533517, Length=381, Percent_Identity=25.4593175853018, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17506239, Length=329, Percent_Identity=26.7477203647416, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17508101, Length=302, Percent_Identity=24.5033112582781, Blast_Score=72, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=292, Percent_Identity=26.7123287671233, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI21356377, Length=311, Percent_Identity=26.6881028938907, Blast_Score=79, Evalue=1e-14,
Organism=Drosophila melanogaster, GI281363737, Length=325, Percent_Identity=25.2307692307692, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24646207, Length=277, Percent_Identity=26.3537906137184, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666513, Length=306, Percent_Identity=24.5098039215686, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 60577; Mature: 60446

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFQDPPRLGNQYDDDALLQSYLARTLPEDLRRALTDEFRELGELGGDYFYRFQLRDRL
CCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCC
NEPELTQWDAWGQRVDHIEVSPLWKEAESLAARRGLVATAYEQKNAELSRVHQFILNYLV
CCCCCCHHHHHHCCCCCEECCHHHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHHHHHHHH
QASLDVYSCPLAMTDGAARSLLTLGNTALIDRALPHLTSRDPATAWTSGQWMTERTGGSD
HHCCCHHCCCCEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCC
VGLTQTVARQTPEGWRLSGTKWFTSATTAQMALTLARPEGNGPGGKGLALFYVETRDAAG
CCHHHHHHHCCCCCCEECCCEEECCHHHHHHEEEEECCCCCCCCCCCEEEEEEECCCCCC
RLNGIQINRLKDKLGTRKVPTAELTLDGALAIPVAGLTDGIRNMAWMLNVTRTWNAVGSA
CCCCEEHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAMRRALALARDYAQRRVQFGAKLADKPLHMDTLAGLEAEFQAGFLLAFRAVELLGRMEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KAATEQELLLQRLVTPLAKLTTGRQVVHVTSEVTEAFGGAGYVEDTGIPRIQADAQVLSI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCEECCHHHEEE
WEGTTNVLSLDTLRALAKEGALEAFFHEVEGRLGQTRDAGLRPCVDAAQGALEHARAWVA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GAMEDPATLEAGARRFSLTLGRTLELALLCAHAQWCLDHGHGPRSKAAARRFASHGVDLI
CCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH
QPAASLEDVRLLA
CCCCCHHHHHCCC
>Mature Secondary Structure 
SFFQDPPRLGNQYDDDALLQSYLARTLPEDLRRALTDEFRELGELGGDYFYRFQLRDRL
CCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHCC
NEPELTQWDAWGQRVDHIEVSPLWKEAESLAARRGLVATAYEQKNAELSRVHQFILNYLV
CCCCCCHHHHHHCCCCCEECCHHHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHHHHHHHH
QASLDVYSCPLAMTDGAARSLLTLGNTALIDRALPHLTSRDPATAWTSGQWMTERTGGSD
HHCCCHHCCCCEECCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCC
VGLTQTVARQTPEGWRLSGTKWFTSATTAQMALTLARPEGNGPGGKGLALFYVETRDAAG
CCHHHHHHHCCCCCCEECCCEEECCHHHHHHEEEEECCCCCCCCCCCEEEEEEECCCCCC
RLNGIQINRLKDKLGTRKVPTAELTLDGALAIPVAGLTDGIRNMAWMLNVTRTWNAVGSA
CCCCEEHHHHHHHHCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
WAMRRALALARDYAQRRVQFGAKLADKPLHMDTLAGLEAEFQAGFLLAFRAVELLGRMEA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KAATEQELLLQRLVTPLAKLTTGRQVVHVTSEVTEAFGGAGYVEDTGIPRIQADAQVLSI
HHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHCCCCCCCCCCCCCEECCHHHEEE
WEGTTNVLSLDTLRALAKEGALEAFFHEVEGRLGQTRDAGLRPCVDAAQGALEHARAWVA
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
GAMEDPATLEAGARRFSLTLGRTLELALLCAHAQWCLDHGHGPRSKAAARRFASHGVDLI
CCCCCCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH
QPAASLEDVRLLA
CCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]