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The map label for this gene is aidB [C]

Identifier: 108756925

GI number: 108756925

Start: 5853473

End: 5855317

Strand: Reverse

Name: aidB [C]

Synonym: MXAN_4671

Alternate gene names: 108756925

Gene position: 5855317-5853473 (Counterclockwise)

Preceding gene: 108758539

Following gene: 108759028

Centisome position: 64.06

GC content: 66.99

Gene sequence:

>1845_bases
ATGTCCGCCGGGATCAACACCTACAAGACCGACCTTCGAGAGATCTTCTTCACGCTGTTCGAGCAGTTCGGCTTCGGCCA
GGTGGCCGGCCAGGCGCCGTTCGATGCCTGGGGTCCGGACGAAGCGAAGGCGGTGCTGTCGGAGACGTATCGCTTCGCGC
GCGAGGTGCTCGGGCCCCTCAACTCGGTGGGTGACCGGGAGGGATGCCGGGTGGAGAACGGCGCCGTCTTCACGCCGACG
GGCTTCAAGGACGCGTGGAAGAAGCTCTACGAGCAGGGCTTCAAGACGGTGGGCGTGAGCCCGGAGCACGGCGGCCAGGG
CTCGCCGATGATGCTCCAGGTGACGGTGGAGGAGCTGCTGTCGGGCGCCAACTCGGCGTTCAACATGTACCCCGGCCTGG
CCTTCGGCGCGGCGGAAGTTGTCGCGGAGTGCGGCACGCCCGAGCAGCAGAAACAGTTCGTGGAGCGCATGCTCAACGGC
ACGTGGGGCGGCACCATGTGCCTCACCGAGCCGCACGCCGGCTCCGACGTGGGCGCGGCCAAGTCGACGGCCCGCCGCAA
CGGCGACGGCACCTACAACATCCGCGGGACGAAGATCTTCATCTCCGGCGGCGACCACGACATGGCGGAGAACATCATCC
ACCTCGTGCTCGCGCGCATTGACGGCGCCTCGCCGGGCACCAAGGGCCTGTCGCTGTTCATCGTCCCCAAGCTGCGCATC
AACGCGGACGGCAGCTCGGGCCAGCCCAACGACGTGGGCGTGGGCTCCATCGAGCACAAGATGGGCATCAACGGCTCGGC
CACCTGTGTCATCAACTTTGGTGAGAGCGACAACTGTGTCGGCGAGCTCGTGGGCACCGTCGAGCACGTCGGCATGAGCC
AGATGTTCAAGATGATGAACGGCGCGCGCATCGCCGTGGGCATCCAGGGCATTGGCCTGGCGTCCGCCGCGTACTACAAC
GCGCTGGACTACGCGAAGGACCGCAAGCAGGGCTCCCACTTCACCAAGTGGAAGGACCCCACCGCGCCCCGCGCCGCCAT
CATCGAGCACCCGGACGTCCGCCGCATGCTGCTGGACATCAAGGCGCATGTGGAGGGCATCCGCTCGCTGATCATCAAGC
TGGCCATGCACCTGGACAAGGCGCGCCAACTGGCCGGCAAGGATGACGACGCGGCCACCTACCACAAGGGCCAGGTGGAG
CTGCTCACCCCGCTGGTGAAGGCCTACAGCTCCGAGCAGGCGTTCCGCCTGTGCGCGCAGGCCATCCAGATCTACGGCGG
CGCCGGCTACATCCAGGACTACCCGGTGGAGCAGTACACCCGCGACTCGAAGATCTTCTCCATCTACGAGGGCACCACCC
ACATCCAGGCCATGGACCTGGTGGGCCGGAAGATGGGCCAGGCGGGCGGCATGCACTTCCAGCAGTTCATGGGCGACGTG
GGCTCCTTCATCGAGGCCCACCGCGAGCACGCCGTCTACGGCGAGGCCGTGAAGTCCCTGGCCGCGGCGCAGGAGGCCCT
GATGGCCAGCGCCATGGTGGTGTTCGGCTGGTCGCAGGACGGCAGCAAGTTCCCGCTGATTCCGCTGTCCGCCAACCGCT
TCCTCGACATGATGTCCGAGGTCGCCGTGGGCTGGCTGCTGCTGGACGCGGCCGTCATCGCGGAGAAGGCGAAGGGCTCC
GTCTCCGCGGACCACCCGGACCACGCCTTCTACGAGGGCAAGAAGTACAGCGCCCTCTGGTACGCGCGGAACGTGCTGCC
CAACGTGGAGCAGGCGGCGAAGATGCTCACCATCGAGGACACCTCGCCCATGGACATCTCGGACGCCGCCTTCGCGTCCG
TCTGA

Upstream 100 bases:

>100_bases
TCAAAAATCAGTCGCCGCCACACTTCCTGCGTCTCAACGCGCCGCTGACCTCATCCTTTTTCACCGAGGGCGGGCAGCGA
GCCGTCACGCAGGAGTGGCC

Downstream 100 bases:

>100_bases
GCCCGCGCCCCGCTGAAAGGCGGGGCGCCTGAAGCATCAAGGCCACCCGGGCGCGCTGCCCTGGGTGGCCTTCGTGTTCC
CAGCGGGGAGGTGTTGCCTA

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; BCAD; SCAD [H]

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MSAGINTYKTDLREIFFTLFEQFGFGQVAGQAPFDAWGPDEAKAVLSETYRFAREVLGPLNSVGDREGCRVENGAVFTPT
GFKDAWKKLYEQGFKTVGVSPEHGGQGSPMMLQVTVEELLSGANSAFNMYPGLAFGAAEVVAECGTPEQQKQFVERMLNG
TWGGTMCLTEPHAGSDVGAAKSTARRNGDGTYNIRGTKIFISGGDHDMAENIIHLVLARIDGASPGTKGLSLFIVPKLRI
NADGSSGQPNDVGVGSIEHKMGINGSATCVINFGESDNCVGELVGTVEHVGMSQMFKMMNGARIAVGIQGIGLASAAYYN
ALDYAKDRKQGSHFTKWKDPTAPRAAIIEHPDVRRMLLDIKAHVEGIRSLIIKLAMHLDKARQLAGKDDDAATYHKGQVE
LLTPLVKAYSSEQAFRLCAQAIQIYGGAGYIQDYPVEQYTRDSKIFSIYEGTTHIQAMDLVGRKMGQAGGMHFQQFMGDV
GSFIEAHREHAVYGEAVKSLAAAQEALMASAMVVFGWSQDGSKFPLIPLSANRFLDMMSEVAVGWLLLDAAVIAEKAKGS
VSADHPDHAFYEGKKYSALWYARNVLPNVEQAAKMLTIEDTSPMDISDAAFASV

Sequences:

>Translated_614_residues
MSAGINTYKTDLREIFFTLFEQFGFGQVAGQAPFDAWGPDEAKAVLSETYRFAREVLGPLNSVGDREGCRVENGAVFTPT
GFKDAWKKLYEQGFKTVGVSPEHGGQGSPMMLQVTVEELLSGANSAFNMYPGLAFGAAEVVAECGTPEQQKQFVERMLNG
TWGGTMCLTEPHAGSDVGAAKSTARRNGDGTYNIRGTKIFISGGDHDMAENIIHLVLARIDGASPGTKGLSLFIVPKLRI
NADGSSGQPNDVGVGSIEHKMGINGSATCVINFGESDNCVGELVGTVEHVGMSQMFKMMNGARIAVGIQGIGLASAAYYN
ALDYAKDRKQGSHFTKWKDPTAPRAAIIEHPDVRRMLLDIKAHVEGIRSLIIKLAMHLDKARQLAGKDDDAATYHKGQVE
LLTPLVKAYSSEQAFRLCAQAIQIYGGAGYIQDYPVEQYTRDSKIFSIYEGTTHIQAMDLVGRKMGQAGGMHFQQFMGDV
GSFIEAHREHAVYGEAVKSLAAAQEALMASAMVVFGWSQDGSKFPLIPLSANRFLDMMSEVAVGWLLLDAAVIAEKAKGS
VSADHPDHAFYEGKKYSALWYARNVLPNVEQAAKMLTIEDTSPMDISDAAFASV
>Mature_613_residues
SAGINTYKTDLREIFFTLFEQFGFGQVAGQAPFDAWGPDEAKAVLSETYRFAREVLGPLNSVGDREGCRVENGAVFTPTG
FKDAWKKLYEQGFKTVGVSPEHGGQGSPMMLQVTVEELLSGANSAFNMYPGLAFGAAEVVAECGTPEQQKQFVERMLNGT
WGGTMCLTEPHAGSDVGAAKSTARRNGDGTYNIRGTKIFISGGDHDMAENIIHLVLARIDGASPGTKGLSLFIVPKLRIN
ADGSSGQPNDVGVGSIEHKMGINGSATCVINFGESDNCVGELVGTVEHVGMSQMFKMMNGARIAVGIQGIGLASAAYYNA
LDYAKDRKQGSHFTKWKDPTAPRAAIIEHPDVRRMLLDIKAHVEGIRSLIIKLAMHLDKARQLAGKDDDAATYHKGQVEL
LTPLVKAYSSEQAFRLCAQAIQIYGGAGYIQDYPVEQYTRDSKIFSIYEGTTHIQAMDLVGRKMGQAGGMHFQQFMGDVG
SFIEAHREHAVYGEAVKSLAAAQEALMASAMVVFGWSQDGSKFPLIPLSANRFLDMMSEVAVGWLLLDAAVIAEKAKGSV
SADHPDHAFYEGKKYSALWYARNVLPNVEQAAKMLTIEDTSPMDISDAAFASV

Specific function: Has an optimum specificity for 4-carbon length fatty acyl-CoAs [H]

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=437, Percent_Identity=28.604118993135, Blast_Score=140, Evalue=5e-33,
Organism=Homo sapiens, GI7656849, Length=385, Percent_Identity=28.3116883116883, Blast_Score=129, Evalue=9e-30,
Organism=Homo sapiens, GI4557233, Length=440, Percent_Identity=27.9545454545455, Blast_Score=114, Evalue=2e-25,
Organism=Homo sapiens, GI4557231, Length=428, Percent_Identity=28.2710280373832, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI187960098, Length=428, Percent_Identity=28.2710280373832, Blast_Score=112, Evalue=1e-24,
Organism=Homo sapiens, GI21361497, Length=391, Percent_Identity=27.8772378516624, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI226958412, Length=435, Percent_Identity=24.367816091954, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI4501857, Length=386, Percent_Identity=25.1295336787565, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI226958414, Length=392, Percent_Identity=25, Blast_Score=101, Evalue=2e-21,
Organism=Escherichia coli, GI87082384, Length=335, Percent_Identity=25.6716417910448, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI87081958, Length=384, Percent_Identity=25.78125, Blast_Score=75, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=420, Percent_Identity=26.1904761904762, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17533517, Length=425, Percent_Identity=26.3529411764706, Blast_Score=122, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17534899, Length=436, Percent_Identity=27.7522935779816, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17538396, Length=437, Percent_Identity=27.9176201372998, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17506239, Length=373, Percent_Identity=26.5415549597855, Blast_Score=115, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI17569725, Length=441, Percent_Identity=26.530612244898, Blast_Score=112, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17570075, Length=386, Percent_Identity=27.2020725388601, Blast_Score=104, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI86563383, Length=496, Percent_Identity=25.8064516129032, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI86563381, Length=496, Percent_Identity=25.8064516129032, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71985184, Length=398, Percent_Identity=25.1256281407035, Blast_Score=91, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=235, Percent_Identity=29.7872340425532, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=290, Percent_Identity=25.1724137931034, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=376, Percent_Identity=24.468085106383, Blast_Score=75, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17505929, Length=316, Percent_Identity=25.6329113924051, Blast_Score=67, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71982178, Length=307, Percent_Identity=24.1042345276873, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI21355753, Length=441, Percent_Identity=27.891156462585, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24666513, Length=434, Percent_Identity=26.4976958525346, Blast_Score=115, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24660351, Length=424, Percent_Identity=28.0660377358491, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24646207, Length=433, Percent_Identity=27.2517321016166, Blast_Score=112, Evalue=5e-25,
Organism=Drosophila melanogaster, GI21356377, Length=393, Percent_Identity=26.7175572519084, Blast_Score=108, Evalue=8e-24,
Organism=Drosophila melanogaster, GI281363737, Length=337, Percent_Identity=27.5964391691395, Blast_Score=97, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 66319; Mature: 66188

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGINTYKTDLREIFFTLFEQFGFGQVAGQAPFDAWGPDEAKAVLSETYRFAREVLGPL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NSVGDREGCRVENGAVFTPTGFKDAWKKLYEQGFKTVGVSPEHGGQGSPMMLQVTVEELL
HHCCCCCCCEECCCEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEHHHHH
SGANSAFNMYPGLAFGAAEVVAECGTPEQQKQFVERMLNGTWGGTMCLTEPHAGSDVGAA
CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHH
KSTARRNGDGTYNIRGTKIFISGGDHDMAENIIHLVLARIDGASPGTKGLSLFIVPKLRI
HHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE
NADGSSGQPNDVGVGSIEHKMGINGSATCVINFGESDNCVGELVGTVEHVGMSQMFKMMN
ECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHC
GARIAVGIQGIGLASAAYYNALDYAKDRKQGSHFTKWKDPTAPRAAIIEHPDVRRMLLDI
CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHH
KAHVEGIRSLIIKLAMHLDKARQLAGKDDDAATYHKGQVELLTPLVKAYSSEQAFRLCAQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
AIQIYGGAGYIQDYPVEQYTRDSKIFSIYEGTTHIQAMDLVGRKMGQAGGMHFQQFMGDV
HHHHHCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
GSFIEAHREHAVYGEAVKSLAAAQEALMASAMVVFGWSQDGSKFPLIPLSANRFLDMMSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCHHHHHHHHHH
VAVGWLLLDAAVIAEKAKGSVSADHPDHAFYEGKKYSALWYARNVLPNVEQAAKMLTIED
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCHHHHHHEEEECC
TSPMDISDAAFASV
CCCCCCCCHHHHCC
>Mature Secondary Structure 
SAGINTYKTDLREIFFTLFEQFGFGQVAGQAPFDAWGPDEAKAVLSETYRFAREVLGPL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
NSVGDREGCRVENGAVFTPTGFKDAWKKLYEQGFKTVGVSPEHGGQGSPMMLQVTVEELL
HHCCCCCCCEECCCEEECCCCHHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEHHHHH
SGANSAFNMYPGLAFGAAEVVAECGTPEQQKQFVERMLNGTWGGTMCLTEPHAGSDVGAA
CCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHH
KSTARRNGDGTYNIRGTKIFISGGDHDMAENIIHLVLARIDGASPGTKGLSLFIVPKLRI
HHHHHCCCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEE
NADGSSGQPNDVGVGSIEHKMGINGSATCVINFGESDNCVGELVGTVEHVGMSQMFKMMN
ECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHC
GARIAVGIQGIGLASAAYYNALDYAKDRKQGSHFTKWKDPTAPRAAIIEHPDVRRMLLDI
CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHH
KAHVEGIRSLIIKLAMHLDKARQLAGKDDDAATYHKGQVELLTPLVKAYSSEQAFRLCAQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
AIQIYGGAGYIQDYPVEQYTRDSKIFSIYEGTTHIQAMDLVGRKMGQAGGMHFQQFMGDV
HHHHHCCCCCCCCCCHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
GSFIEAHREHAVYGEAVKSLAAAQEALMASAMVVFGWSQDGSKFPLIPLSANRFLDMMSE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECCHHHHHHHHHH
VAVGWLLLDAAVIAEKAKGSVSADHPDHAFYEGKKYSALWYARNVLPNVEQAAKMLTIED
HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCHHHHHHEEEECC
TSPMDISDAAFASV
CCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8399220; 7857927 [H]