Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is ubiE [C]

Identifier: 108756901

GI number: 108756901

Start: 3031542

End: 3032330

Strand: Direct

Name: ubiE [C]

Synonym: MXAN_2605

Alternate gene names: 108756901

Gene position: 3031542-3032330 (Clockwise)

Preceding gene: 108762252

Following gene: 108761373

Centisome position: 33.17

GC content: 69.96

Gene sequence:

>789_bases
ATGACCTACCTGATGGAGTCGGCCCAGGAGGTGCACCGCCTGCAAGCGCAGGCGAGCGCCACCTCCTACGCGGAGCGGCT
GAGGCTCACCGGGTTGAGGCCCGGGGACGCCGCACTGGATGTGGGCTGCGGTCCCGGCGTCATCACCTCGGAGATGCTGG
ACGTGGTGGGGCCGCACGGCCGCGTGGTGGGTATCGAGCCGCAGGCCGAACACCTGGCGGCGGCCCGGGGACTGCTGGCG
GGCAGGCCCAATGTGGAGCTGCGTCAGGGCGCGCTGCCGGATACACAGCTGCCCGCCGACCACTTCGACTACGTCTGGTG
CCAGTACGTCTTCGAGTACCTGGGAGAGCCGGGCCCCGCGCTGGCGGAGCTGGTGCGCGTGGTCCGCCCTGGTGGGCGCG
TGGTGGTGGCGGACATCGACGGGGTGGGGCTGTGGAACTGGCCCTTTCCGGAGGACCTCCAGGAGGCGAGCCAGAAGCTG
CTCGCCGCCCTGCGCGCAGCGCGCTTCGACCTGCACGCGGGCCGCAAGCTGTTCCACCTGTTCCGCAAGGCCGGGTTGGT
GGACGTGCGCGTGCACATCTCCCCGTTCTATGTGGCGGCGGGTGCGGTGGACGCGCGGCTCCGCGAGGACTGGGTCATCC
GCTTCCGGACGCTGCGCCCGCTCGCCGAGCCCTTCTTCGGGGGCGCCGGCCCCTATGACGCTTTCTGTGAACGCTTCCTC
GCACTCCTGGACGACGCCGACACCCTCAAATATGCGATGGTGTTGACGACCGAAGGAGTGAAGCGTTGA

Upstream 100 bases:

>100_bases
GGCTCGTGCGTGACTGGAATGCCTACCTGCTCGCCGTCTTCGAGCGGCTGGCGGCCCATGGCCGGGGTGGTAGCCGGATG
GATGACAAGGACATCGCGGC

Downstream 100 bases:

>100_bases
CCGTCCCCGCGGAACTGGCCTCCGCACCGTCAGCCCCCGACACACCCGAGCTGAGTGTCCGGATGCTGCGCAGCGTGATG
TTGTACTACGAGCGGACCTA

Product: hypothetical protein

Products: S-Adenosyl-L-Homocysteine; @OCTA02.txt*2- Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol!; Menaquinol. [C]

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MTYLMESAQEVHRLQAQASATSYAERLRLTGLRPGDAALDVGCGPGVITSEMLDVVGPHGRVVGIEPQAEHLAAARGLLA
GRPNVELRQGALPDTQLPADHFDYVWCQYVFEYLGEPGPALAELVRVVRPGGRVVVADIDGVGLWNWPFPEDLQEASQKL
LAALRAARFDLHAGRKLFHLFRKAGLVDVRVHISPFYVAAGAVDARLREDWVIRFRTLRPLAEPFFGGAGPYDAFCERFL
ALLDDADTLKYAMVLTTEGVKR

Sequences:

>Translated_262_residues
MTYLMESAQEVHRLQAQASATSYAERLRLTGLRPGDAALDVGCGPGVITSEMLDVVGPHGRVVGIEPQAEHLAAARGLLA
GRPNVELRQGALPDTQLPADHFDYVWCQYVFEYLGEPGPALAELVRVVRPGGRVVVADIDGVGLWNWPFPEDLQEASQKL
LAALRAARFDLHAGRKLFHLFRKAGLVDVRVHISPFYVAAGAVDARLREDWVIRFRTLRPLAEPFFGGAGPYDAFCERFL
ALLDDADTLKYAMVLTTEGVKR
>Mature_261_residues
TYLMESAQEVHRLQAQASATSYAERLRLTGLRPGDAALDVGCGPGVITSEMLDVVGPHGRVVGIEPQAEHLAAARGLLAG
RPNVELRQGALPDTQLPADHFDYVWCQYVFEYLGEPGPALAELVRVVRPGGRVVVADIDGVGLWNWPFPEDLQEASQKLL
AALRAARFDLHAGRKLFHLFRKAGLVDVRVHISPFYVAAGAVDARLREDWVIRFRTLRPLAEPFFGGAGPYDAFCERFLA
LLDDADTLKYAMVLTTEGVKR

Specific function: Methyltransferase Required For The Conversion Of Dimethylmenaquinone (Dmkh2) To Menaquinone (Mkh2) And The Conversion Of 2-Polyprenyl-6-Methoxy-1,4-Benzoquinol (Ddmqh2) To 2-Polyprenyl-3-Methyl-6-Methoxy-1,4-Benzoquinol (Dmqh2). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08241 Methyltransf_11; PF03551 PadR [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 28816; Mature: 28685

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYLMESAQEVHRLQAQASATSYAERLRLTGLRPGDAALDVGCGPGVITSEMLDVVGPHG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCC
RVVGIEPQAEHLAAARGLLAGRPNVELRQGALPDTQLPADHFDYVWCQYVFEYLGEPGPA
CEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
LAELVRVVRPGGRVVVADIDGVGLWNWPFPEDLQEASQKLLAALRAARFDLHAGRKLFHL
HHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRKAGLVDVRVHISPFYVAAGAVDARLREDWVIRFRTLRPLAEPFFGGAGPYDAFCERFL
HHHCCEEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ALLDDADTLKYAMVLTTEGVKR
HHHCCCCHHEEEEEEECCCCCC
>Mature Secondary Structure 
TYLMESAQEVHRLQAQASATSYAERLRLTGLRPGDAALDVGCGPGVITSEMLDVVGPHG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCC
RVVGIEPQAEHLAAARGLLAGRPNVELRQGALPDTQLPADHFDYVWCQYVFEYLGEPGPA
CEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHH
LAELVRVVRPGGRVVVADIDGVGLWNWPFPEDLQEASQKLLAALRAARFDLHAGRKLFHL
HHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FRKAGLVDVRVHISPFYVAAGAVDARLREDWVIRFRTLRPLAEPFFGGAGPYDAFCERFL
HHHCCEEEEEEEECCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
ALLDDADTLKYAMVLTTEGVKR
HHHCCCCHHEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: S-Adenosyl-L-Methionine; 2-Polyprenyl-6- Methoxy-1,4-Benzoquinol; Demethylmenaquinol [C]

Specific reaction: S-Adenosyl-L-Methionine + @OCTA02.txt*2-Polyprenyl-6- Methoxy-1,4-Benzoquinol! = S-Adenosyl-L-Homocysteine + 2- Polyprenyl-3-Methyl-6-Methoxy -1,4-Benzoquinol S-Adenosyl-L-Methionine + Demethylmenaquinol = S-Adenosyl-L-Homocysteine + Menaquinol. [C]

General reaction: Transferring one-carbon groups; Methyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155856 [H]