| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is macB [H]
Identifier: 108756882
GI number: 108756882
Start: 2006276
End: 2008735
Strand: Reverse
Name: macB [H]
Synonym: MXAN_1695
Alternate gene names: 108756882
Gene position: 2008735-2006276 (Counterclockwise)
Preceding gene: 108761327
Following gene: 108759952
Centisome position: 21.98
GC content: 72.68
Gene sequence:
>2460_bases ATGGATTCCGTTCTGGCTGGACTGCGTCAAAGCCTGCGCTCGCTGGGCCGCAGCCCCGGCTTCACGCTGGGGTGTGTACT GATGCTGGCGGTGGGCATCGGAGCGAGCACCGCGCTCTTCAGCGTGGTGGAAGGCGTTCTGCTGCGTCCCCTGCCCTATC CGCGCCCCGAGCGCCTCGTGGAGCTCTCCCAGCGCGCGGCGGACGGCCATCCAATGCGGTTCTCGGACCCCAACTTCGAG GATGTGCGGACGCGCGCTCGCACCGTCTCGGCGCTGGCCCAGGTGTCGGGAGCGGCGAGCGTCGCCGTCACGGGCGCCGA CGAGCCGGCCTTCGCCACGCTGGCGCTCGCCTCACGCGACTTCTTCCCCGCCTTCGCGGTACGGCCTGTCCAGGGGCGCC TCTTCGCGGAGGAGGAGCAGCAGGAGGGAGGTGCTCCCGTGGTGATGGTGAGCCACGCCTTCTGGAAGCGCTATCTGGGC GCACGGCCGCTGCCCCTTCCGGACACCCTCACCTTCGAGGGGCGCGCTTACACCGTGGTGGGCGTGATGCCCGAGTCCTT CGACTACCCGGTGGGCACGCAGCTGTGGGTTCCGCGGGAGCTGGTGCCCCCCCTGCCCAGCCGCACCGCACACAACTGGC GGGTGGTGGGAAGGCTGGCGGACGGCGTCGACCTCCAGGCCGCGCGAGTGGAGCTCACACACATCGCCCGCGAGCTCGAA GCCCAGTACGGCCAGGACACGCGGATGCATGACATCGCCGTGGAGCCCTTGCAAGAGAGCCTGGTGGGCCGCGTGCGGTC CACGCTCTACCTGCTTGCGGGCGCCGCGGCCTTCCTGCTGCTGGTGGCGGGCGCCAACGTCACGAACCTGCTGCTCGCCC GCGCGGCCACCCGTGCCCGGGAGCTCGCCATTCACGTGGCCCTGGGCGCGGGGCCCGGAGCGTTGATGCGGCGATTCCTC ATGGAGTCGCTCCTGCTCTCATTGGCGGGAGGCGCACTGGGGGCGGTGCTTGCCGCCTGGGGCGTGCGCGCGCTGCTCGC GGCCGAGCCGGGCCACCTGCCACGGGTCGACGAGGTGGGGGTGAACGCCACGGTGCTCCTCTTCTCCCTCGGGCTCTCGC TGCTGCTCGCACTGGGGCTGGGGTTGCTGACGGCGCTGCGCGCGGCGCGGCAGCCCCCGGGGGCCGCGCTGGCGGGCTCG GGGCGCACGCACAGCGGAGGAGGGAGCGCCGAGCGCACGCGCCGGGCCCTCGTCGTGGGGCAGCTCGCGCTCGCATTGGT CCTCCTGGTGGGCGCGGCGCTGCTCGGGCGGAGCCTGATGGGGCTGCTCTCGCTGGACCCGGGGTATCGCACCGAGGATG TCGCGGTGCTCAGCCTCGTGCTCCCCCCGGCAAAGGACGAGGCGCAGGGGCGGCACAACGTGCAGTTGCAGGAGCACCTC CTCTCGCGACTGGCGGCGCTGCCCGGCGTGCGCGCGGTGGGCGCCGTGAGCAGCTTCCCGCTCGAGGGAAGCCCGGCGGG AGATGGCACCTTCATCGTGCTCAACCGCCCCGACGAGGTGGGGAACTTCGAGGACTTCGGGCGGCTGGCGCGCGAGCCCG AGCGCACCGGCTCCGCCGAGTACCGCGTGGCGAGCGAGGGCTACTTCGCCGCGCTCGGCATCCCGCTCGTGCGCGGGCGT CTGTTCGATGCACGCGACACCGTCGACGCGCCGCACGTGGCCGTCATCAGCGAGTCGCTCGCGAAGGCCCGCTGGCCCCA CGAGGACCCGCTGGGCAAGCTCATTCAGTTCGGCAACATGGACGGGGACCTGCGTCCCTTCACCATTGTCGGCGTGGTGG GGGACGTGCGGGAGCAAGGGCTGGATGACGCGCCCAGGCCCATGTTCTATGGCGGCTCCCGGCAGCGTCTGCGGGCCTCC TCCCGCTTCCACCTCGCCGTACACGGGCCAATGGGCTCCGCTGCCCTGGTCACCGCGGCGCTGCCGGTGCTGCGAGAGCT TGCCCCCGAGCTGCCCTCGCGCCTGTCCACGGTGGAGGGATTGCTCGCGGGCTCGCTCGCCCCCAGGCGCTTCAGCCTCC TGCTGCTGGGCGCCTTCGGTGCGATGGCGCTGCTGCTCTCGGTGGCGGGCCTCGCGGCCGTCGTGTCCTACGCGGTGGCG CAGCGCACGCGGGAATTCGGTATCCGCTTCGCGCTGGGCGCGACGACGGAAGACGTGCTGGGGCTGGTGCTCCGGCAGGC GGCGCGGCTCGCGGGGCTGGGAATCGTGCTCGGCGTGCTGGGGGCCCTGGGGCTCAGCCAGGTGCTCGCGGGGCTCGTGT ACGGAGTGAGCACCACGGACCCGCTCGTCTTCCTCGTGGTGGCGCTCCTCCTGCTCGGCGTGGCGCTGCTCGCGAGCTGG CTGCCGGCCCGACGTGCTTCGCGCGTGGACCCGATGACCGTGCTTCGCTCGGAGGCCTGA
Upstream 100 bases:
>100_bases CACGACCAAGGGCCTGGTGGCTGAGCAGGGACACGCAATCGTCCGCCGGCCCGAACGTAGCCGCTCCGGAAGCCGCCGAC CGGCTTCAGGAGATGTCGCG
Downstream 100 bases:
>100_bases AGCGCCTGTGCCTGCCCGAAGTCTGGCTGCTGTGCCCATTCGCGCATCACGGAGGGTTCTTCTCATGTCTCCCGTCGCTG TCTCGCGCAGGGCCCCGTGT
Product: putative permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 819; Mature: 819
Protein sequence:
>819_residues MDSVLAGLRQSLRSLGRSPGFTLGCVLMLAVGIGASTALFSVVEGVLLRPLPYPRPERLVELSQRAADGHPMRFSDPNFE DVRTRARTVSALAQVSGAASVAVTGADEPAFATLALASRDFFPAFAVRPVQGRLFAEEEQQEGGAPVVMVSHAFWKRYLG ARPLPLPDTLTFEGRAYTVVGVMPESFDYPVGTQLWVPRELVPPLPSRTAHNWRVVGRLADGVDLQAARVELTHIARELE AQYGQDTRMHDIAVEPLQESLVGRVRSTLYLLAGAAAFLLLVAGANVTNLLLARAATRARELAIHVALGAGPGALMRRFL MESLLLSLAGGALGAVLAAWGVRALLAAEPGHLPRVDEVGVNATVLLFSLGLSLLLALGLGLLTALRAARQPPGAALAGS GRTHSGGGSAERTRRALVVGQLALALVLLVGAALLGRSLMGLLSLDPGYRTEDVAVLSLVLPPAKDEAQGRHNVQLQEHL LSRLAALPGVRAVGAVSSFPLEGSPAGDGTFIVLNRPDEVGNFEDFGRLAREPERTGSAEYRVASEGYFAALGIPLVRGR LFDARDTVDAPHVAVISESLAKARWPHEDPLGKLIQFGNMDGDLRPFTIVGVVGDVREQGLDDAPRPMFYGGSRQRLRAS SRFHLAVHGPMGSAALVTAALPVLRELAPELPSRLSTVEGLLAGSLAPRRFSLLLLGAFGAMALLLSVAGLAAVVSYAVA QRTREFGIRFALGATTEDVLGLVLRQAARLAGLGIVLGVLGALGLSQVLAGLVYGVSTTDPLVFLVVALLLLGVALLASW LPARRASRVDPMTVLRSEA
Sequences:
>Translated_819_residues MDSVLAGLRQSLRSLGRSPGFTLGCVLMLAVGIGASTALFSVVEGVLLRPLPYPRPERLVELSQRAADGHPMRFSDPNFE DVRTRARTVSALAQVSGAASVAVTGADEPAFATLALASRDFFPAFAVRPVQGRLFAEEEQQEGGAPVVMVSHAFWKRYLG ARPLPLPDTLTFEGRAYTVVGVMPESFDYPVGTQLWVPRELVPPLPSRTAHNWRVVGRLADGVDLQAARVELTHIARELE AQYGQDTRMHDIAVEPLQESLVGRVRSTLYLLAGAAAFLLLVAGANVTNLLLARAATRARELAIHVALGAGPGALMRRFL MESLLLSLAGGALGAVLAAWGVRALLAAEPGHLPRVDEVGVNATVLLFSLGLSLLLALGLGLLTALRAARQPPGAALAGS GRTHSGGGSAERTRRALVVGQLALALVLLVGAALLGRSLMGLLSLDPGYRTEDVAVLSLVLPPAKDEAQGRHNVQLQEHL LSRLAALPGVRAVGAVSSFPLEGSPAGDGTFIVLNRPDEVGNFEDFGRLAREPERTGSAEYRVASEGYFAALGIPLVRGR LFDARDTVDAPHVAVISESLAKARWPHEDPLGKLIQFGNMDGDLRPFTIVGVVGDVREQGLDDAPRPMFYGGSRQRLRAS SRFHLAVHGPMGSAALVTAALPVLRELAPELPSRLSTVEGLLAGSLAPRRFSLLLLGAFGAMALLLSVAGLAAVVSYAVA QRTREFGIRFALGATTEDVLGLVLRQAARLAGLGIVLGVLGALGLSQVLAGLVYGVSTTDPLVFLVVALLLLGVALLASW LPARRASRVDPMTVLRSEA >Mature_819_residues MDSVLAGLRQSLRSLGRSPGFTLGCVLMLAVGIGASTALFSVVEGVLLRPLPYPRPERLVELSQRAADGHPMRFSDPNFE DVRTRARTVSALAQVSGAASVAVTGADEPAFATLALASRDFFPAFAVRPVQGRLFAEEEQQEGGAPVVMVSHAFWKRYLG ARPLPLPDTLTFEGRAYTVVGVMPESFDYPVGTQLWVPRELVPPLPSRTAHNWRVVGRLADGVDLQAARVELTHIARELE AQYGQDTRMHDIAVEPLQESLVGRVRSTLYLLAGAAAFLLLVAGANVTNLLLARAATRARELAIHVALGAGPGALMRRFL MESLLLSLAGGALGAVLAAWGVRALLAAEPGHLPRVDEVGVNATVLLFSLGLSLLLALGLGLLTALRAARQPPGAALAGS GRTHSGGGSAERTRRALVVGQLALALVLLVGAALLGRSLMGLLSLDPGYRTEDVAVLSLVLPPAKDEAQGRHNVQLQEHL LSRLAALPGVRAVGAVSSFPLEGSPAGDGTFIVLNRPDEVGNFEDFGRLAREPERTGSAEYRVASEGYFAALGIPLVRGR LFDARDTVDAPHVAVISESLAKARWPHEDPLGKLIQFGNMDGDLRPFTIVGVVGDVREQGLDDAPRPMFYGGSRQRLRAS SRFHLAVHGPMGSAALVTAALPVLRELAPELPSRLSTVEGLLAGSLAPRRFSLLLLGAFGAMALLLSVAGLAAVVSYAVA QRTREFGIRFALGATTEDVLGLVLRQAARLAGLGIVLGVLGALGLSQVLAGLVYGVSTTDPLVFLVVALLLLGVALLASW LPARRASRVDPMTVLRSEA
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=295, Percent_Identity=28.135593220339, Blast_Score=79, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 86354; Mature: 86354
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSVLAGLRQSLRSLGRSPGFTLGCVLMLAVGIGASTALFSVVEGVLLRPLPYPRPERLV CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH ELSQRAADGHPMRFSDPNFEDVRTRARTVSALAQVSGAASVAVTGADEPAFATLALASRD HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCC FFPAFAVRPVQGRLFAEEEQQEGGAPVVMVSHAFWKRYLGARPLPLPDTLTFEGRAYTVV CCCHHHCCCCCCCEECCHHHHCCCCCEEEECHHHHHHHHCCCCCCCCCCEEECCCEEEEE GVMPESFDYPVGTQLWVPRELVPPLPSRTAHNWRVVGRLADGVDLQAARVELTHIARELE EECCCCCCCCCCCCEECCHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH AQYGQDTRMHDIAVEPLQESLVGRVRSTLYLLAGAAAFLLLVAGANVTNLLLARAATRAR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ELAIHVALGAGPGALMRRFLMESLLLSLAGGALGAVLAAWGVRALLAAEPGHLPRVDEVG HEEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC VNATVLLFSLGLSLLLALGLGLLTALRAARQPPGAALAGSGRTHSGGGSAERTRRALVVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHH QLALALVLLVGAALLGRSLMGLLSLDPGYRTEDVAVLSLVLPPAKDEAQGRHNVQLQEHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCCCCCCCCCHHHHHH LSRLAALPGVRAVGAVSSFPLEGSPAGDGTFIVLNRPDEVGNFEDFGRLAREPERTGSAE HHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC YRVASEGYFAALGIPLVRGRLFDARDTVDAPHVAVISESLAKARWPHEDPLGKLIQFGNM EEEECCCCEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC DGDLRPFTIVGVVGDVREQGLDDAPRPMFYGGSRQRLRASSRFHLAVHGPMGSAALVTAA CCCCCCEEEEEEHHHHHHCCCCCCCCCCEECCCHHHHHCCCCEEEEEECCCCHHHHHHHH LPVLRELAPELPSRLSTVEGLLAGSLAPRRFSLLLLGAFGAMALLLSVAGLAAVVSYAVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRTREFGIRFALGATTEDVLGLVLRQAARLAGLGIVLGVLGALGLSQVLAGLVYGVSTTD HHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLVFLVVALLLLGVALLASWLPARRASRVDPMTVLRSEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC >Mature Secondary Structure MDSVLAGLRQSLRSLGRSPGFTLGCVLMLAVGIGASTALFSVVEGVLLRPLPYPRPERLV CCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH ELSQRAADGHPMRFSDPNFEDVRTRARTVSALAQVSGAASVAVTGADEPAFATLALASRD HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCC FFPAFAVRPVQGRLFAEEEQQEGGAPVVMVSHAFWKRYLGARPLPLPDTLTFEGRAYTVV CCCHHHCCCCCCCEECCHHHHCCCCCEEEECHHHHHHHHCCCCCCCCCCEEECCCEEEEE GVMPESFDYPVGTQLWVPRELVPPLPSRTAHNWRVVGRLADGVDLQAARVELTHIARELE EECCCCCCCCCCCCEECCHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHH AQYGQDTRMHDIAVEPLQESLVGRVRSTLYLLAGAAAFLLLVAGANVTNLLLARAATRAR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH ELAIHVALGAGPGALMRRFLMESLLLSLAGGALGAVLAAWGVRALLAAEPGHLPRVDEVG HEEEEEEECCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC VNATVLLFSLGLSLLLALGLGLLTALRAARQPPGAALAGSGRTHSGGGSAERTRRALVVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCHHHHHHHHHHH QLALALVLLVGAALLGRSLMGLLSLDPGYRTEDVAVLSLVLPPAKDEAQGRHNVQLQEHL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEEEEECCCCCCCCCCCCCCHHHHHH LSRLAALPGVRAVGAVSSFPLEGSPAGDGTFIVLNRPDEVGNFEDFGRLAREPERTGSAE HHHHHHCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCC YRVASEGYFAALGIPLVRGRLFDARDTVDAPHVAVISESLAKARWPHEDPLGKLIQFGNM EEEECCCCEEECCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCC DGDLRPFTIVGVVGDVREQGLDDAPRPMFYGGSRQRLRASSRFHLAVHGPMGSAALVTAA CCCCCCEEEEEEHHHHHHCCCCCCCCCCEECCCHHHHHCCCCEEEEEECCCCHHHHHHHH LPVLRELAPELPSRLSTVEGLLAGSLAPRRFSLLLLGAFGAMALLLSVAGLAAVVSYAVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QRTREFGIRFALGATTEDVLGLVLRQAARLAGLGIVLGVLGALGLSQVLAGLVYGVSTTD HHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PLVFLVVALLLLGVALLASWLPARRASRVDPMTVLRSEA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA