| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is 108756867
Identifier: 108756867
GI number: 108756867
Start: 5691130
End: 5693646
Strand: Reverse
Name: 108756867
Synonym: MXAN_4561
Alternate gene names: NA
Gene position: 5693646-5691130 (Counterclockwise)
Preceding gene: 108760509
Following gene: 108759966
Centisome position: 62.3
GC content: 73.98
Gene sequence:
>2517_bases ATGCGACGCTCCCCACGACATCCCCGGTCGCGCCGTCTCACGCCGGCGCTCGCGCTGCTGACCACCCTGTGCGGCCCGCC CGCGCTGGCCCAGTACCGCCCGCCGCCCATGTCCGAATCCCAGCGGCTGGTGCGGGACGGCGAGGCGGCGCAGGTGGCCG CCAGCGCCGCCAGCGCCTCGGGTGACAAGAAGGAGGCCGAGGAGAAGTACCGCAAGGCCCTGGCCCTCTTCGAACAGGCA CTGACCGCCGAGCCTGGCTCCGTGGCCGCCGCCGCCGGCCTGGGTGCCAGCGCCAACGCGCTCAATGACTGGCAGCGCAC CGTGGACCGGGTGCAGCCGGTGCTGACGGCGAACCCCTCGGAGCTGGCCCTGGCCTATCCGGTGAGCGTGGCGTACTTCA AGCTGCGCCGCTTCCCGGAGGCCGTGCCGCTGATGGAGCGGGTGGCCACGGCCGACAAGGCCGAACACCTCATCGTTCAT TACTACCTGGCCAGCTACTACCTCTACGTCCAGCAGGGAGACGCGGCGGCCACGCGGCTGAAGCGCTACCTGGCGCTGCG TCCGCAGGCCCTGGCACCCAACGACTTCCAGATTCACGAGCTGCTGGGTCGCGCCCATGTGCTGCGCGGGGATGCCGCGG CGGCGCGCGCGTCCTTCCAGCAGGCGCAGGCGGGCCGGCCAGAGTCGCCGTCGGTGCAACTGGGCCTGGCGCAGGTGCTG GAGCTGGAGGGCAGGGCCGTGGAGGCGCGCACGTTGCTGGAGGGCGTCACCACGCGCTTCCCGCAGGCGGGTGATGCGCG CGAGAAGCTGGCCCGTCTGTACCTGGGCGCGGGGGACGTCGCGAAGGCGGACACGCAGGCCCAGGCGGTGATGAAGCTGG GCAGCTCACCCGCGGCGCACCTGCTGCTGGGTGACGTGCGCTTCGCCCAGAAGAACGCGGCCGCCGCGGAGGCGGAGTAT CGCAAGGTGCTCCAGCTCCAGCCGGGCCTGGTGCTGGGGCAGATGGCGGTGGGCAAGGCGCTCCAGGCACAGGGCCGGCA CGAGGAGGCCATCCAGTTCCTGGAGGGCGCGGTGCGCGCGGGCGCCAACAGCCTGGAGCTGTGGGCCAACCTGGGCTCGG TGAATCGCCGCGCGGGCCGCTTCCAGCGCGCGGTGGAGGTGCACCGGCGCGTGGTGGAGATGGCGCCGCGTCAGGCCCTG GGCTACGTGCTGCTGGGCGCGGACCACTTCGCCACCGGCCAGTGGGACCAGGCCATCGAGGACTACGCCAACGCGCTGCA GGTGGAGCCGGAACACGCCGGGGCGAAGCAGTGGCTGGCCCGGGCCCTGGCGCACCGGGCGCGGGACAGGGCGGGCACGG GACGGCTGGAGGACGCCGTCCGGGATTTGCGCCGCGCGTACGACCTGGACCGGGGCGCACCCATGGCGCGCCGGCTGGGC GCCTCGCTGCTGGAGACGCGCGCCTACGCGGACGCGCGCAAGGTGATGGAGCAGGGCGTGATGCTGCCGGGCGCCGCGTG GCGTGACAGCTTGCTGCTGGGGTACGCGCGGCTGGCCACGAACGATGCCCAGGCGGCGCTGGAGGCCTTCAACCGCGCGG CCGCCCAGACGGAGGAGCCCGACGAACAGGCGGAGGCCTCCGTCGGCGCCGCGCTGGCCGAGGTGGAGCTGGGGCAGGTG GACGCGGCGGTGCAGCGCCTCACCGCGGTGGGCCCGTCGCGCGCCGCGGCGCAGGTGGCGGGCGCCAACCTTCCGCGCGT GCTGGTGCGCCGGGCGCTGGTGCGCCTGGAGGCCGGAGATGCCGACGCCGCCGAGCGGGATTTGGACTTGGTGGACAAGC TGGGCACGGGCAACCGCAAGGAGCTGGTGCGGCTGGCCCAGTTCGTCCGCGGCCTGGCGCGCGCGGAGTCGGGGCGCCAC GCGGAGGCGAGCGCGGCCATCACCAAGGCCCTTGCGTCCACGCAGCCCTGGGCCTGGCCCAACACGCGCGCGCTGGCCAC CGCCTTCGTGCTCTACAAGAAGGGGCAGGTGCCCGCCGCGCGCAAGCAGTTGACCGCGGCGGCGAAGAAGCCGATGCCCG GACAGCCCAAGTGGCTGACGGCGATGACGGGCGCGCTCCACCGCCGCGAGGCATCCCAGGCGTACAATGCCGGCAACATG AGGGCGGCGGAGAAGGCCTTCAAGGCCGCGCTCGCCGGCAATCCGGACGACACGCAGGTGCAGCACAACCTGGCCTGCGT CGACTGGCGCAAGGGCCGCACGACAGACGCCGTGGAGACGTGGCGCCGGCTGGAGTCGAGCGTGCCGGTGGCCGCGCTCA ACCTGGGCATCGACGCGCAGGAGCGCCGCAAGGACGCGGGTGAGGCCGTGGAGGCATGGCGCCGCTACCTGGCCGGCGGC AGCGGCCCGCGCATGGCGCAGGTGCGTGAGTGGAAGGAACGCCTGCAGAGTCTGCACGGCCTGGCCGAGCCCGCCGCGGG CGCGCCCGCGGACGCCACCGTGGAGGAGACCCCATGA
Upstream 100 bases:
>100_bases CTCGCGCCTTCAGCGCCGGCCAGCCGCAGCGGGACGACATCACCGTCGTCGTGGCCGAGTTCAGCCCCGCCGCCTGACTT CCTTCTGGGACTCCACACGC
Downstream 100 bases:
>100_bases AGACGTCACCTCGCTTCCTCCTGGCTGGCCTCGTGCTGGCCTGCACCCTGACGGCCAGTTCCGCGCTCGCGGCGCCGAAG AAGGCCACGCTGGGGGTGTT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Protein
Number of amino acids: Translated: 838; Mature: 838
Protein sequence:
>838_residues MRRSPRHPRSRRLTPALALLTTLCGPPALAQYRPPPMSESQRLVRDGEAAQVAASAASASGDKKEAEEKYRKALALFEQA LTAEPGSVAAAAGLGASANALNDWQRTVDRVQPVLTANPSELALAYPVSVAYFKLRRFPEAVPLMERVATADKAEHLIVH YYLASYYLYVQQGDAAATRLKRYLALRPQALAPNDFQIHELLGRAHVLRGDAAAARASFQQAQAGRPESPSVQLGLAQVL ELEGRAVEARTLLEGVTTRFPQAGDAREKLARLYLGAGDVAKADTQAQAVMKLGSSPAAHLLLGDVRFAQKNAAAAEAEY RKVLQLQPGLVLGQMAVGKALQAQGRHEEAIQFLEGAVRAGANSLELWANLGSVNRRAGRFQRAVEVHRRVVEMAPRQAL GYVLLGADHFATGQWDQAIEDYANALQVEPEHAGAKQWLARALAHRARDRAGTGRLEDAVRDLRRAYDLDRGAPMARRLG ASLLETRAYADARKVMEQGVMLPGAAWRDSLLLGYARLATNDAQAALEAFNRAAAQTEEPDEQAEASVGAALAEVELGQV DAAVQRLTAVGPSRAAAQVAGANLPRVLVRRALVRLEAGDADAAERDLDLVDKLGTGNRKELVRLAQFVRGLARAESGRH AEASAAITKALASTQPWAWPNTRALATAFVLYKKGQVPAARKQLTAAAKKPMPGQPKWLTAMTGALHRREASQAYNAGNM RAAEKAFKAALAGNPDDTQVQHNLACVDWRKGRTTDAVETWRRLESSVPVAALNLGIDAQERRKDAGEAVEAWRRYLAGG SGPRMAQVREWKERLQSLHGLAEPAAGAPADATVEETP
Sequences:
>Translated_838_residues MRRSPRHPRSRRLTPALALLTTLCGPPALAQYRPPPMSESQRLVRDGEAAQVAASAASASGDKKEAEEKYRKALALFEQA LTAEPGSVAAAAGLGASANALNDWQRTVDRVQPVLTANPSELALAYPVSVAYFKLRRFPEAVPLMERVATADKAEHLIVH YYLASYYLYVQQGDAAATRLKRYLALRPQALAPNDFQIHELLGRAHVLRGDAAAARASFQQAQAGRPESPSVQLGLAQVL ELEGRAVEARTLLEGVTTRFPQAGDAREKLARLYLGAGDVAKADTQAQAVMKLGSSPAAHLLLGDVRFAQKNAAAAEAEY RKVLQLQPGLVLGQMAVGKALQAQGRHEEAIQFLEGAVRAGANSLELWANLGSVNRRAGRFQRAVEVHRRVVEMAPRQAL GYVLLGADHFATGQWDQAIEDYANALQVEPEHAGAKQWLARALAHRARDRAGTGRLEDAVRDLRRAYDLDRGAPMARRLG ASLLETRAYADARKVMEQGVMLPGAAWRDSLLLGYARLATNDAQAALEAFNRAAAQTEEPDEQAEASVGAALAEVELGQV DAAVQRLTAVGPSRAAAQVAGANLPRVLVRRALVRLEAGDADAAERDLDLVDKLGTGNRKELVRLAQFVRGLARAESGRH AEASAAITKALASTQPWAWPNTRALATAFVLYKKGQVPAARKQLTAAAKKPMPGQPKWLTAMTGALHRREASQAYNAGNM RAAEKAFKAALAGNPDDTQVQHNLACVDWRKGRTTDAVETWRRLESSVPVAALNLGIDAQERRKDAGEAVEAWRRYLAGG SGPRMAQVREWKERLQSLHGLAEPAAGAPADATVEETP >Mature_838_residues MRRSPRHPRSRRLTPALALLTTLCGPPALAQYRPPPMSESQRLVRDGEAAQVAASAASASGDKKEAEEKYRKALALFEQA LTAEPGSVAAAAGLGASANALNDWQRTVDRVQPVLTANPSELALAYPVSVAYFKLRRFPEAVPLMERVATADKAEHLIVH YYLASYYLYVQQGDAAATRLKRYLALRPQALAPNDFQIHELLGRAHVLRGDAAAARASFQQAQAGRPESPSVQLGLAQVL ELEGRAVEARTLLEGVTTRFPQAGDAREKLARLYLGAGDVAKADTQAQAVMKLGSSPAAHLLLGDVRFAQKNAAAAEAEY RKVLQLQPGLVLGQMAVGKALQAQGRHEEAIQFLEGAVRAGANSLELWANLGSVNRRAGRFQRAVEVHRRVVEMAPRQAL GYVLLGADHFATGQWDQAIEDYANALQVEPEHAGAKQWLARALAHRARDRAGTGRLEDAVRDLRRAYDLDRGAPMARRLG ASLLETRAYADARKVMEQGVMLPGAAWRDSLLLGYARLATNDAQAALEAFNRAAAQTEEPDEQAEASVGAALAEVELGQV DAAVQRLTAVGPSRAAAQVAGANLPRVLVRRALVRLEAGDADAAERDLDLVDKLGTGNRKELVRLAQFVRGLARAESGRH AEASAAITKALASTQPWAWPNTRALATAFVLYKKGQVPAARKQLTAAAKKPMPGQPKWLTAMTGALHRREASQAYNAGNM RAAEKAFKAALAGNPDDTQVQHNLACVDWRKGRTTDAVETWRRLESSVPVAALNLGIDAQERRKDAGEAVEAWRRYLAGG SGPRMAQVREWKERLQSLHGLAEPAAGAPADATVEETP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307150, Length=202, Percent_Identity=29.7029702970297, Blast_Score=70, Evalue=6e-12, Organism=Homo sapiens, GI32307148, Length=202, Percent_Identity=29.7029702970297, Blast_Score=70, Evalue=7e-12, Organism=Caenorhabditis elegans, GI115532692, Length=189, Percent_Identity=27.5132275132275, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115532690, Length=189, Percent_Identity=27.5132275132275, Blast_Score=67, Evalue=5e-11, Organism=Drosophila melanogaster, GI17647755, Length=195, Percent_Identity=29.2307692307692, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24585827, Length=195, Percent_Identity=29.2307692307692, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI24585829, Length=195, Percent_Identity=29.2307692307692, Blast_Score=72, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90326; Mature: 90326
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSPRHPRSRRLTPALALLTTLCGPPALAQYRPPPMSESQRLVRDGEAAQVAASAASAS CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCC GDKKEAEEKYRKALALFEQALTAEPGSVAAAAGLGASANALNDWQRTVDRVQPVLTANPS CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC ELALAYPVSVAYFKLRRFPEAVPLMERVATADKAEHLIVHYYLASYYLYVQQGDAAATRL CEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHH KRYLALRPQALAPNDFQIHELLGRAHVLRGDAAAARASFQQAQAGRPESPSVQLGLAQVL HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ELEGRAVEARTLLEGVTTRFPQAGDAREKLARLYLGAGDVAKADTQAQAVMKLGSSPAAH HHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH LLLGDVRFAQKNAAAAEAEYRKVLQLQPGLVLGQMAVGKALQAQGRHEEAIQFLEGAVRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GANSLELWANLGSVNRRAGRFQRAVEVHRRVVEMAPRQALGYVLLGADHFATGQWDQAIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCEEEECCCCCCCCCHHHHHH DYANALQVEPEHAGAKQWLARALAHRARDRAGTGRLEDAVRDLRRAYDLDRGAPMARRLG HHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH ASLLETRAYADARKVMEQGVMLPGAAWRDSLLLGYARLATNDAQAALEAFNRAAAQTEEP HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC DEQAEASVGAALAEVELGQVDAAVQRLTAVGPSRAAAQVAGANLPRVLVRRALVRLEAGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC ADAAERDLDLVDKLGTGNRKELVRLAQFVRGLARAESGRHAEASAAITKALASTQPWAWP CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC NTRALATAFVLYKKGQVPAARKQLTAAAKKPMPGQPKWLTAMTGALHRREASQAYNAGNM CHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH RAAEKAFKAALAGNPDDTQVQHNLACVDWRKGRTTDAVETWRRLESSVPVAALNLGIDAQ HHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCHH ERRKDAGEAVEAWRRYLAGGSGPRMAQVREWKERLQSLHGLAEPAAGAPADATVEETP HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRSPRHPRSRRLTPALALLTTLCGPPALAQYRPPPMSESQRLVRDGEAAQVAASAASAS CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCC GDKKEAEEKYRKALALFEQALTAEPGSVAAAAGLGASANALNDWQRTVDRVQPVLTANPS CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC ELALAYPVSVAYFKLRRFPEAVPLMERVATADKAEHLIVHYYLASYYLYVQQGDAAATRL CEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHH KRYLALRPQALAPNDFQIHELLGRAHVLRGDAAAARASFQQAQAGRPESPSVQLGLAQVL HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ELEGRAVEARTLLEGVTTRFPQAGDAREKLARLYLGAGDVAKADTQAQAVMKLGSSPAAH HHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH LLLGDVRFAQKNAAAAEAEYRKVLQLQPGLVLGQMAVGKALQAQGRHEEAIQFLEGAVRA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GANSLELWANLGSVNRRAGRFQRAVEVHRRVVEMAPRQALGYVLLGADHFATGQWDQAIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCEEEECCCCCCCCCHHHHHH DYANALQVEPEHAGAKQWLARALAHRARDRAGTGRLEDAVRDLRRAYDLDRGAPMARRLG HHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH ASLLETRAYADARKVMEQGVMLPGAAWRDSLLLGYARLATNDAQAALEAFNRAAAQTEEP HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC DEQAEASVGAALAEVELGQVDAAVQRLTAVGPSRAAAQVAGANLPRVLVRRALVRLEAGD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC ADAAERDLDLVDKLGTGNRKELVRLAQFVRGLARAESGRHAEASAAITKALASTQPWAWP CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCC NTRALATAFVLYKKGQVPAARKQLTAAAKKPMPGQPKWLTAMTGALHRREASQAYNAGNM CHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH RAAEKAFKAALAGNPDDTQVQHNLACVDWRKGRTTDAVETWRRLESSVPVAALNLGIDAQ HHHHHHHHHHHCCCCCCHHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCHH ERRKDAGEAVEAWRRYLAGGSGPRMAQVREWKERLQSLHGLAEPAAGAPADATVEETP HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA