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The map label for this gene is kamE

Identifier: 108756817

GI number: 108756817

Start: 5389117

End: 5389902

Strand: Reverse

Name: kamE

Synonym: MXAN_4386

Alternate gene names: NA

Gene position: 5389902-5389117 (Counterclockwise)

Preceding gene: 108759718

Following gene: 108756898

Centisome position: 58.97

GC content: 65.27

Gene sequence:

>786_bases
ATGGTGAAGCCGAGCAAGCAGATCATCCGTCCCTACGGCGACCGGCGGGACGACGGCGTGGTGCAGCTGTCGTTCACCCT
GCCGGTGCCGTTGTCCGAGAAGGCCAAGGAGGCCGCCGCCGTCTTCACGAAGAAGATGGGCTTCACTGACGTGAAGGTGG
CCGCCGCCGAGCGCGCCGCGGACACCTACACCTTCTTCATCGTCTACGCCCGGTCGTCCGTCGCGCTGGACTACGCCGAA
ATCGACGTGCCCGAAGTCGTCGTGAAGAAGATGTCCTTCGACGACCTCAACGCCTTCATCAAGGAGAAGGTGAAGCGGCG
CATCGTGGTGTTCGGCGCCTGCACGGGCACGGACACGCACACGGTGGGCATCGACGCCATCCTCAACATGAAGGGCTACG
CGGGCGACTACGGCCTGGAGCGCTACGCCTGGTTCGAGGCCTTCAACCTGGGCAGCCAGGTGCCGAACGAGGACCTCATC
AAGAAGGCCATGGCGCGCAACGCGGACGCCATCCTGGTCAGCCAGGTCGTCACCCAGCGCGATGTGCACAAGGACAACTC
GCGGCACTTCATCGAAGCGGCGAAGGCAGCTGGCATCCACGGCAAGGTCCAACTGCTACTGGGCGGGCCCCGCGTGGACC
ACAAGCTGGCGCTGGAGCTGGGCTTCGACGCCGGCTTCGGGCCCGGCACCAAGCCGTCCGACGTGGCCAACTACATCGTC
CACGCGCTCCTCAAGAAGGAAGGCAAGGAGCCGAAGGACGCGCACTATCAGGGGGAGCCCCAGTGA

Upstream 100 bases:

>100_bases
GTCTTCTACCTGGAGCAGACGAAGAAGGAGCGGTTCGCTCCGCTGGCCCAGAAGGTGGGCTCCAGCGTCAAGATTCAGCG
GGCCGGAGGGAAGTGAGCCG

Downstream 100 bases:

>100_bases
GCACGGGAACGAAGGCGATCATCCGGCTGCGCATGAGCAGCCACGACGCACATTACGGCGGCAACCTGGTCGACGGCGCG
CGGATGCTGGGCCTCTTTGG

Product: D-lysine 5,6-aminomutase subunit beta

Products: (3S,5S)-3,5-diaminohexanoate

Alternate protein names: D-Ornithine Aminomutase E Component; L-Beta-Lysine 5 6-Aminomutase Beta Subunit; D-Lysine; D-Lysine 56-Aminomutase Beta Subunit; D-Ornithine 4 5-Aminomutase E Subunit; Cobalamin Vitamin; Beta-Lysine 5 6-Aminomutase Beta Subunit; Beta-Lysine 56-Aminomutase Beta Subunit; Methylmalonyl-CoA Mutase C- Domain/Subunit; D-Lysine 5 6-Aminomutase Subunit Beta; D-Lysine 5 6-Aminomutase Beta Subunit; Lysine 5 6-Aminomutase Beta Subunit

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MVKPSKQIIRPYGDRRDDGVVQLSFTLPVPLSEKAKEAAAVFTKKMGFTDVKVAAAERAADTYTFFIVYARSSVALDYAE
IDVPEVVVKKMSFDDLNAFIKEKVKRRIVVFGACTGTDTHTVGIDAILNMKGYAGDYGLERYAWFEAFNLGSQVPNEDLI
KKAMARNADAILVSQVVTQRDVHKDNSRHFIEAAKAAGIHGKVQLLLGGPRVDHKLALELGFDAGFGPGTKPSDVANYIV
HALLKKEGKEPKDAHYQGEPQ

Sequences:

>Translated_261_residues
MVKPSKQIIRPYGDRRDDGVVQLSFTLPVPLSEKAKEAAAVFTKKMGFTDVKVAAAERAADTYTFFIVYARSSVALDYAE
IDVPEVVVKKMSFDDLNAFIKEKVKRRIVVFGACTGTDTHTVGIDAILNMKGYAGDYGLERYAWFEAFNLGSQVPNEDLI
KKAMARNADAILVSQVVTQRDVHKDNSRHFIEAAKAAGIHGKVQLLLGGPRVDHKLALELGFDAGFGPGTKPSDVANYIV
HALLKKEGKEPKDAHYQGEPQ
>Mature_261_residues
MVKPSKQIIRPYGDRRDDGVVQLSFTLPVPLSEKAKEAAAVFTKKMGFTDVKVAAAERAADTYTFFIVYARSSVALDYAE
IDVPEVVVKKMSFDDLNAFIKEKVKRRIVVFGACTGTDTHTVGIDAILNMKGYAGDYGLERYAWFEAFNLGSQVPNEDLI
KKAMARNADAILVSQVVTQRDVHKDNSRHFIEAAKAAGIHGKVQLLLGGPRVDHKLALELGFDAGFGPGTKPSDVANYIV
HALLKKEGKEPKDAHYQGEPQ

Specific function: Unknown

COG id: COG5012

COG function: function code R; Predicted cobalamin binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.4.3.3

Molecular weight: Translated: 28670; Mature: 28670

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKPSKQIIRPYGDRRDDGVVQLSFTLPVPLSEKAKEAAAVFTKKMGFTDVKVAAAERAA
CCCCCHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
DTYTFFIVYARSSVALDYAEIDVPEVVVKKMSFDDLNAFIKEKVKRRIVVFGACTGTDTH
CEEEEEEEEECCCCEEEHHHCCHHHHHHHHCCHHHHHHHHHHHHHCEEEEEEECCCCCCE
TVGIDAILNMKGYAGDYGLERYAWFEAFNLGSQVPNEDLIKKAMARNADAILVSQVVTQR
EEEHHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
DVHKDNSRHFIEAAKAAGIHGKVQLLLGGPRVDHKLALELGFDAGFGPGTKPSDVANYIV
HHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
HALLKKEGKEPKDAHYQGEPQ
HHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVKPSKQIIRPYGDRRDDGVVQLSFTLPVPLSEKAKEAAAVFTKKMGFTDVKVAAAERAA
CCCCCHHHHCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
DTYTFFIVYARSSVALDYAEIDVPEVVVKKMSFDDLNAFIKEKVKRRIVVFGACTGTDTH
CEEEEEEEEECCCCEEEHHHCCHHHHHHHHCCHHHHHHHHHHHHHCEEEEEEECCCCCCE
TVGIDAILNMKGYAGDYGLERYAWFEAFNLGSQVPNEDLIKKAMARNADAILVSQVVTQR
EEEHHHEEECCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH
DVHKDNSRHFIEAAKAAGIHGKVQLLLGGPRVDHKLALELGFDAGFGPGTKPSDVANYIV
HHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHH
HALLKKEGKEPKDAHYQGEPQ
HHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (3S)-3,6-diaminohexanoate

Specific reaction: (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA