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The map label for this gene is yaaW [C]

Identifier: 108563960

GI number: 108563960

Start: 1595565

End: 1596290

Strand: Reverse

Name: yaaW [C]

Synonym: HPAG1_1535

Alternate gene names: 108563960

Gene position: 1596290-1595565 (Counterclockwise)

Preceding gene: NA

Following gene: 108563959

Centisome position: 100.0

GC content: 38.57

Gene sequence:

>726_bases
TTGGAATTTTTAAAGCGATTAAGCTCTAATGATTTGAAAGATTTGTTTGATGCGCTTGTTTATGATGAAGATGGCACACT
AAGAATGAATGAAGAATTGACAAATTCAACAGAATATAAAAGGTATGGCCATGATTACGCTAAATACCCCACAAGGATTG
CTGAAGAATTGCAGCGTTACGGGGGCAATACTTTTATTAATTTTTTTAGAGATGAAGGGGTCTTATACAAAGAGATTTTG
TGCGATGCGTGCGATCATTTAAAGGTTAATTACCATGAAAAATCTCCAACCTCTTTGATTGAGCAAAACATGCTTTCTAA
ACTTTTGAAAGATAGTTTGGAAAAAGTGAGCGATGAGGAGATTAGAGAGCTTTGCGATGAATTGGGCATGACAAATATTG
ATAAAATGATTGGTGAAAACAAACAAGCCCTAATCGCATCTGTTTTAACGCTGTTTAAAGCGGGTGGCTCTCATTCTTAT
GCGTTGGCTGTATCTGTTGCAGATGCAATGGTAAGACAAACTCTAGGGCATGGTTTATCGTCTGTAGTGGGTAAAGTAGC
GCTTAAAAAAACTCTAGGCATTTTAGCTGGCCCTATTGGTTGGGTCATTACAGGTGCGTTAGTGAGCATCAATCTTGCAG
GGCCGGCTTATAGGGTAACCGTTCCTGCATGCGTTTTGATCGCCACTTTACGGAGAAAACCAAAACAGATAAATAAGCCA
AAATAG

Upstream 100 bases:

>100_bases
ATGATGCTATAATCACTAATCACTAAAAGAGGGGGTTTGTGGGATTTGAGCGAGCGGTAGGAATAAAATTAAAGGGATTG
CATGGCATACAAATAGCGAC

Downstream 100 bases:

>100_bases
ACAATAAGAAAGGGGTAAGGGGATCTCTATCTTCGTTTTTCTGGTTATTTTGATTATTGTCTCATCAGTCATTTTTTTCA
TCAAAAGAGAACACCAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MEFLKRLSSNDLKDLFDALVYDEDGTLRMNEELTNSTEYKRYGHDYAKYPTRIAEELQRYGGNTFINFFRDEGVLYKEIL
CDACDHLKVNYHEKSPTSLIEQNMLSKLLKDSLEKVSDEEIRELCDELGMTNIDKMIGENKQALIASVLTLFKAGGSHSY
ALAVSVADAMVRQTLGHGLSSVVGKVALKKTLGILAGPIGWVITGALVSINLAGPAYRVTVPACVLIATLRRKPKQINKP
K

Sequences:

>Translated_241_residues
MEFLKRLSSNDLKDLFDALVYDEDGTLRMNEELTNSTEYKRYGHDYAKYPTRIAEELQRYGGNTFINFFRDEGVLYKEIL
CDACDHLKVNYHEKSPTSLIEQNMLSKLLKDSLEKVSDEEIRELCDELGMTNIDKMIGENKQALIASVLTLFKAGGSHSY
ALAVSVADAMVRQTLGHGLSSVVGKVALKKTLGILAGPIGWVITGALVSINLAGPAYRVTVPACVLIATLRRKPKQINKP
K
>Mature_241_residues
MEFLKRLSSNDLKDLFDALVYDEDGTLRMNEELTNSTEYKRYGHDYAKYPTRIAEELQRYGGNTFINFFRDEGVLYKEIL
CDACDHLKVNYHEKSPTSLIEQNMLSKLLKDSLEKVSDEEIRELCDELGMTNIDKMIGENKQALIASVLTLFKAGGSHSY
ALAVSVADAMVRQTLGHGLSSVVGKVALKKTLGILAGPIGWVITGALVSINLAGPAYRVTVPACVLIATLRRKPKQINKP
K

Specific function: Unknown

COG id: COG4735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0174 family [H]

Homologues:

Organism=Escherichia coli, GI1786193, Length=236, Percent_Identity=29.2372881355932, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021150 [H]

Pfam domain/function: PF03981 Ubiq_cyt_C_chap [H]

EC number: NA

Molecular weight: Translated: 26816; Mature: 26816

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLKRLSSNDLKDLFDALVYDEDGTLRMNEELTNSTEYKRYGHDYAKYPTRIAEELQRY
CHHHHHHCCCCHHHHHHHHHCCCCCCEEECHHHHCCHHHHHHCCHHHHHHHHHHHHHHHC
GGNTFINFFRDEGVLYKEILCDACDHLKVNYHEKSPTSLIEQNMLSKLLKDSLEKVSDEE
CCCCEEHHHHCCCHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
IRELCDELGMTNIDKMIGENKQALIASVLTLFKAGGSHSYALAVSVADAMVRQTLGHGLS
HHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHH
SVVGKVALKKTLGILAGPIGWVITGALVSINLAGPAYRVTVPACVLIATLRRKPKQINKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCC
K
C
>Mature Secondary Structure
MEFLKRLSSNDLKDLFDALVYDEDGTLRMNEELTNSTEYKRYGHDYAKYPTRIAEELQRY
CHHHHHHCCCCHHHHHHHHHCCCCCCEEECHHHHCCHHHHHHCCHHHHHHHHHHHHHHHC
GGNTFINFFRDEGVLYKEILCDACDHLKVNYHEKSPTSLIEQNMLSKLLKDSLEKVSDEE
CCCCEEHHHHCCCHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
IRELCDELGMTNIDKMIGENKQALIASVLTLFKAGGSHSYALAVSVADAMVRQTLGHGLS
HHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHH
SVVGKVALKKTLGILAGPIGWVITGALVSINLAGPAYRVTVPACVLIATLRRKPKQINKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEHHHHHHHHHHHHHHCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]