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The map label for this gene is fliE [H]

Identifier: 108563931

GI number: 108563931

Start: 1571077

End: 1571406

Strand: Reverse

Name: fliE [H]

Synonym: HPAG1_1506

Alternate gene names: 108563931

Gene position: 1571406-1571077 (Counterclockwise)

Preceding gene: 108563932

Following gene: 108563930

Centisome position: 98.44

GC content: 41.82

Gene sequence:

>330_bases
ATGCAAGCCATACACAATGATAAAAGCTTATTGAGTCCTTTCTCTGAGCTTAACACGGACAACAGGACTAAAAGAGAAGA
ATCGGGTAGCACCTTTAAAGAACAAAAAGGTGGGGAGTTTTCCAAACTCTTAAAACAATCTATCAATGAGCTTAACAACA
CTCAAGAGCAATCTGACAAAGCCTTAGCCGACATGGCGACAGGGCAAATCAAAGACTTGCACCAAGCGGCTATCGCTATA
GGGAAGGCTGAAACGAGCATGAAACTCATGCTTGAAGTGCGTAACAAAGCGATTAGTGCTTATAAAGAGCTTTTAAGAAC
GCAGATCTAG

Upstream 100 bases:

>100_bases
AAGAAAATTTAGGTAGTATTAGCCAAAGATCAGTAGAATACAGAAATGAATAAGATATTTAATAGAGTTAAATTTTTAAA
AAAGAGCTTAAGGAGGTTCT

Downstream 100 bases:

>100_bases
TCTCTTAAGTGGCGTCTCTTTAAATGATCGCTTGGTCCTTTTTAAAGAGAGGGTTTGTTGTTGCTACGCCCTATTTTAAC
AGATTTTACCACCAAAAATT

Product: flagellar hook-basal body protein FliE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MQAIHNDKSLLSPFSELNTDNRTKREESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAI
GKAETSMKLMLEVRNKAISAYKELLRTQI

Sequences:

>Translated_109_residues
MQAIHNDKSLLSPFSELNTDNRTKREESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAI
GKAETSMKLMLEVRNKAISAYKELLRTQI
>Mature_109_residues
MQAIHNDKSLLSPFSELNTDNRTKREESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDKALADMATGQIKDLHQAAIAI
GKAETSMKLMLEVRNKAISAYKELLRTQI

Specific function: Unknown

COG id: COG1677

COG function: function code NU; Flagellar hook-basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001624 [H]

Pfam domain/function: PF02049 FliE [H]

EC number: NA

Molecular weight: Translated: 12196; Mature: 12196

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAIHNDKSLLSPFSELNTDNRTKREESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDK
CCCCCCCHHHHHHHHHCCCCCCHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHCHHHHHHH
ALADMATGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQAIHNDKSLLSPFSELNTDNRTKREESGSTFKEQKGGEFSKLLKQSINELNNTQEQSDK
CCCCCCCHHHHHHHHHCCCCCCHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHCHHHHHHH
ALADMATGQIKDLHQAAIAIGKAETSMKLMLEVRNKAISAYKELLRTQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA