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The map label for this gene is 108563903

Identifier: 108563903

GI number: 108563903

Start: 1540290

End: 1541597

Strand: Direct

Name: 108563903

Synonym: HPAG1_1478

Alternate gene names: NA

Gene position: 1540290-1541597 (Clockwise)

Preceding gene: 108563902

Following gene: 108563904

Centisome position: 96.49

GC content: 32.34

Gene sequence:

>1308_bases
ATGAAATTTTTTCTTTTAAAGAAATTCAGCGAATTTTTAAACGCTCAAACGCATTTTAGCCTCAAACGCTTGAACGCGTC
TAGCTTTTTATTAGAGACTTTTTTTAAAGAAAAACACGCCTTTGTTGTAGATTTGAGCGCGCCTTATATCGGTTTGTCCA
AAAAACCCCCAGAAAGCGTTTTAAAAAACACCCTAGCGTTAGATTTTTGTTTGAATAAATTCACTAAAAACGCCAAAATT
TTACAAGCAAACGTCATTGATAACGATCGGATTTTAGAAATCAAGGGCGCTAAAGATTTAGCTTATAAGAGTGAAACTTT
TATTTTGCGTTTAGAAATGATCCCTAAAAAAGCCAACCTCATGATTTTAGATAAAGAAAAATGCGTGATAGAAGCCTTTC
GTTTTAATGACAGGGTCGCTAAAAACGATATTTTAGGGGCATTGCCTCCTAATATTTACGAGCATCAAGAAGAGGATTTG
GATTTTAAGGATTTGTTAGACATTTTAGAAAAAGATTTTTTATTTTACCAACACAAAGAATTGGAACACAAAAAAAATCA
AATCATCAAGCGATTAAATATTCAAAAAGAACGCTTGAAAGAAAAATTAGAAAAATTAGAAGATCCTAAAAATTTACAAT
TGGAAGCGAAAGAATTGCAAACTCAAGCCTCGCTATTACTCACTTACCAGCATTTAATCCATAAGCATGAAAGTCGCGTG
GTTTTAAAGGATTTTGAAGATAAGGAGTGTGCGATTGAAATTGATAAGAGCATGCCCTTAAACGCTTTTATCAATAAAAA
ATTCACTCTCAGCAAGAAAAAGAAACAAAAATCGCAATTCTTGTATTTAGAAGAAGAGAATTTGAAAGAAAAAATCGCTT
TTAAAGAAAATCAAATCAACTATGTTAAAGGAGCGCAAGAAGAAAGCGTTTTAGAAATGTTTATGCCCTTTAAAAATTCT
AAAATCAAACGCCCGATGAATGGGTATGAAGTGCTGTATTATAAGGATTTTAAAATCGGTTTAGGGAAAAACCAAAAAGA
GAATATCAAGCTTTTACAAGACGCAAGAGCGAATGATTTATGGATGCATGTAAGAAATATTCCCGGATCGCATTTGATCG
TTTTTTGCCAAAAGAACACACCCAAAGATGAGGTCATTATGGAATTAGCCAAAATGTTGATTAAAATGCAAAAAGATGCG
TTTAATAGTTACGAAATTGACTACACGCAACGAAAATTTGTCAAAATCATCAAAGGAGCTAATGTCATTTACTCAAAATA
CCGAACTATTAGTCTAAAGGACACTTAA

Upstream 100 bases:

>100_bases
ATAACGAAGAAAGGGTTTTAGAAATCGCGCGCATGATAGGGGGGAGCGAGAATATAGAGAGCGCGATTTCTTTCGCTAAG
GAAAAATTAAAGGCGCAAGA

Downstream 100 bases:

>100_bases
ACATTCTAAGGAGGTTAGCATGGGTGTTTCCGCTTTAGGCAATGTAACTTATATCAACCAAAACGCTCCTTTAAATTCTG
CTATCCAACATGGTGCAAGA

Product: fibronectin/fibrinogen-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MKFFLLKKFSEFLNAQTHFSLKRLNASSFLLETFFKEKHAFVVDLSAPYIGLSKKPPESVLKNTLALDFCLNKFTKNAKI
LQANVIDNDRILEIKGAKDLAYKSETFILRLEMIPKKANLMILDKEKCVIEAFRFNDRVAKNDILGALPPNIYEHQEEDL
DFKDLLDILEKDFLFYQHKELEHKKNQIIKRLNIQKERLKEKLEKLEDPKNLQLEAKELQTQASLLLTYQHLIHKHESRV
VLKDFEDKECAIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQINYVKGAQEESVLEMFMPFKNS
KIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDLWMHVRNIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDA
FNSYEIDYTQRKFVKIIKGANVIYSKYRTISLKDT

Sequences:

>Translated_435_residues
MKFFLLKKFSEFLNAQTHFSLKRLNASSFLLETFFKEKHAFVVDLSAPYIGLSKKPPESVLKNTLALDFCLNKFTKNAKI
LQANVIDNDRILEIKGAKDLAYKSETFILRLEMIPKKANLMILDKEKCVIEAFRFNDRVAKNDILGALPPNIYEHQEEDL
DFKDLLDILEKDFLFYQHKELEHKKNQIIKRLNIQKERLKEKLEKLEDPKNLQLEAKELQTQASLLLTYQHLIHKHESRV
VLKDFEDKECAIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQINYVKGAQEESVLEMFMPFKNS
KIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDLWMHVRNIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDA
FNSYEIDYTQRKFVKIIKGANVIYSKYRTISLKDT
>Mature_435_residues
MKFFLLKKFSEFLNAQTHFSLKRLNASSFLLETFFKEKHAFVVDLSAPYIGLSKKPPESVLKNTLALDFCLNKFTKNAKI
LQANVIDNDRILEIKGAKDLAYKSETFILRLEMIPKKANLMILDKEKCVIEAFRFNDRVAKNDILGALPPNIYEHQEEDL
DFKDLLDILEKDFLFYQHKELEHKKNQIIKRLNIQKERLKEKLEKLEDPKNLQLEAKELQTQASLLLTYQHLIHKHESRV
VLKDFEDKECAIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQINYVKGAQEESVLEMFMPFKNS
KIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDLWMHVRNIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDA
FNSYEIDYTQRKFVKIIKGANVIYSKYRTISLKDT

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51294; Mature: 51294

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFLLKKFSEFLNAQTHFSLKRLNASSFLLETFFKEKHAFVVDLSAPYIGLSKKPPESV
CCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCEECCCCCCHHHH
LKNTLALDFCLNKFTKNAKILQANVIDNDRILEIKGAKDLAYKSETFILRLEMIPKKANL
HHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCE
MILDKEKCVIEAFRFNDRVAKNDILGALPPNIYEHQEEDLDFKDLLDILEKDFLFYQHKE
EEEECCHHHHHHHHCCCCHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LEHKKNQIIKRLNIQKERLKEKLEKLEDPKNLQLEAKELQTQASLLLTYQHLIHKHESRV
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEE
VLKDFEDKECAIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQIN
EEECCCCCCEEEEECCCCCCHHHHCCCEEECHHHHCHHHEEEEEHHCHHHHHHHCCCCCH
YVKGAQEESVLEMFMPFKNSKIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDL
HHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHCCCCCCE
WMHVRNIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDAFNSYEIDYTQRKFVKIIKGA
EEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCC
NVIYSKYRTISLKDT
CEEEECEEEEEECCC
>Mature Secondary Structure
MKFFLLKKFSEFLNAQTHFSLKRLNASSFLLETFFKEKHAFVVDLSAPYIGLSKKPPESV
CCCHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCEECCCCCCHHHH
LKNTLALDFCLNKFTKNAKILQANVIDNDRILEIKGAKDLAYKSETFILRLEMIPKKANL
HHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCE
MILDKEKCVIEAFRFNDRVAKNDILGALPPNIYEHQEEDLDFKDLLDILEKDFLFYQHKE
EEEECCHHHHHHHHCCCCHHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
LEHKKNQIIKRLNIQKERLKEKLEKLEDPKNLQLEAKELQTQASLLLTYQHLIHKHESRV
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCEE
VLKDFEDKECAIEIDKSMPLNAFINKKFTLSKKKKQKSQFLYLEEENLKEKIAFKENQIN
EEECCCCCCEEEEECCCCCCHHHHCCCEEECHHHHCHHHEEEEEHHCHHHHHHHCCCCCH
YVKGAQEESVLEMFMPFKNSKIKRPMNGYEVLYYKDFKIGLGKNQKENIKLLQDARANDL
HHCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHCCCCCCE
WMHVRNIPGSHLIVFCQKNTPKDEVIMELAKMLIKMQKDAFNSYEIDYTQRKFVKIIKGA
EEEEECCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHCC
NVIYSKYRTISLKDT
CEEEECEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA