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The map label for this gene is 108563846

Identifier: 108563846

GI number: 108563846

Start: 1478150

End: 1478419

Strand: Reverse

Name: 108563846

Synonym: HPAG1_1421

Alternate gene names: NA

Gene position: 1478419-1478150 (Counterclockwise)

Preceding gene: 108563873

Following gene: 108563845

Centisome position: 92.61

GC content: 36.67

Gene sequence:

>270_bases
ATGATAGAATTTAGCGATGAAGATTTACAAAAACCGGTGCGTATTGTGATAGAAAAAATCCGCCCTTACTTGCTCAAAGA
TGGCGGTAATATTGAAGTGCTAGGAGTGAAAAGCATGAAAATTTATGTGGCTTTAGAGGGAGCGTGCAAGACTTGCTCTA
GCAGTAAAATCACTTTAAAAAATGTCATTGAAAGGCAGCTTAAAATGGATATTCACCCCAATTTAGAAGTGGTGTGCTTA
GAAAACGATAAGGAGTTTGATAAGCTTTAA

Upstream 100 bases:

>100_bases
TATCCAATTAGCCCTTGAGCCACTCTTAAAAAGCGTTGTTTGATAAAAATGGCTCATTATATGGTATCTTAAAATAAAAT
TTTAAAGAGAGTTTTAAAAA

Downstream 100 bases:

>100_bases
GGACTATAGGCATGCAAAAGTTTGATTATGAATTTAAAAAGCGCGCGTTGATTAAAGAGGGATTTTTAGCGTTCAAACAA
GCCCATTACGCTGAAGCGTT

Product: NifU-like protein

Products: NA

Alternate protein names: NifU-Like Protein; Nitrogen-Fixing NifU Domain-Containing Protein; NifU Protein Homolog; Nitrogen-Fixing NifU Domain Protein; Nifu-Like Protein; Nitrogen-Fixing NifU-Like Protein; Nitrogen-Fixing Nifu Domain Protein

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLKMDIHPNLEVVCL
ENDKEFDKL

Sequences:

>Translated_89_residues
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLKMDIHPNLEVVCL
ENDKEFDKL
>Mature_89_residues
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLKNVIERQLKMDIHPNLEVVCL
ENDKEFDKL

Specific function: Unknown

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10165; Mature: 10165

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK
CCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCEEEEEEECCCCCCCCCCCEEHH
NVIERQLKMDIHPNLEVVCLENDKEFDKL
HHHHHHHCCCCCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MIEFSDEDLQKPVRIVIEKIRPYLLKDGGNIEVLGVKSMKIYVALEGACKTCSSSKITLK
CCCCCCHHHHHHHHHHHHHHCCEEEECCCCEEEEEECCEEEEEEECCCCCCCCCCCEEHH
NVIERQLKMDIHPNLEVVCLENDKEFDKL
HHHHHHHCCCCCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA