Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563821

Identifier: 108563821

GI number: 108563821

Start: 1451445

End: 1451537

Strand: Reverse

Name: 108563821

Synonym: HPAG1_1396

Alternate gene names: NA

Gene position: 1451537-1451445 (Counterclockwise)

Preceding gene: 108563822

Following gene: 108563816

Centisome position: 90.93

GC content: 29.03

Gene sequence:

>93_bases
ATGAAAAATCATCGTAGTAAACACTCTTGGAAAGAATTATACCTAAAAATCAGTTTTTTGGGTTTAAAGTTTGATCTAGT
GATCAAACGCTAA

Upstream 100 bases:

>100_bases
TTCTTGCTTGTTTTTATAGGGTTAGGATAAAATAACGATCACCCCCTAGTTTTTATTTTGCTAGAGATTAGGGGGTAAAA
TCCACTTTTAGGAGCTTACT

Downstream 100 bases:

>100_bases
TTCTTAAAAAGAGTTGCCCCCTAGATTAGGGGGTCATCCTTAAGTGGGAAATCAGCTTTTCACTGCCCATCTTCAATGAT
CTTAATTTCTTCATCGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 30; Mature: 30

Protein sequence:

>30_residues
MKNHRSKHSWKELYLKISFLGLKFDLVIKR

Sequences:

>Translated_30_residues
MKNHRSKHSWKELYLKISFLGLKFDLVIKR
>Mature_30_residues
MKNHRSKHSWKELYLKISFLGLKFDLVIKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3717; Mature: 3717

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHRSKHSWKELYLKISFLGLKFDLVIKR
CCCCCCCCCCEEEEEEEEEECEEEEEEEEC
>Mature Secondary Structure
MKNHRSKHSWKELYLKISFLGLKFDLVIKR
CCCCCCCCCCEEEEEEEEEECEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA