Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563805

Identifier: 108563805

GI number: 108563805

Start: 1431072

End: 1431218

Strand: Reverse

Name: 108563805

Synonym: HPAG1_1380

Alternate gene names: NA

Gene position: 1431218-1431072 (Counterclockwise)

Preceding gene: 108563808

Following gene: 108563791

Centisome position: 89.65

GC content: 23.13

Gene sequence:

>147_bases
ATGTTAAAAAATGTAGAAATGGGGGCTAATTTTTATAAAGAGCTTGGCAAATTAGAAAAACAATTAGCTAAATATCAAAG
TAAAGTTTTAGAAATTAAAACACAAATGAAAGAGATTATAGTAAATATATTCCTAATGATGAGTTAA

Upstream 100 bases:

>100_bases
AGCGGTATTTATAGCCGCCGTTATTTGTGGTTACCCATTTTATTGTGGTTAAGTTTGGATATAATGGGGTTATTATGATT
GATTGAGTTAAGGAGATAAG

Downstream 100 bases:

>100_bases
AAAAAGATTTATTAGATATTGATAATCCTAATACGACTGAAAACTTTAAGCCTAAGGATGCTAATGAAATTTGGCAATTC
GCTCTTAATTCTTAGGGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 48; Mature: 48

Protein sequence:

>48_residues
MLKNVEMGANFYKELGKLEKQLAKYQSKVLEIKTQMKEIIVNIFLMMS

Sequences:

>Translated_48_residues
MLKNVEMGANFYKELGKLEKQLAKYQSKVLEIKTQMKEIIVNIFLMMS
>Mature_48_residues
MLKNVEMGANFYKELGKLEKQLAKYQSKVLEIKTQMKEIIVNIFLMMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5653; Mature: 5653

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
10.4 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
10.4 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKNVEMGANFYKELGKLEKQLAKYQSKVLEIKTQMKEIIVNIFLMMS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKNVEMGANFYKELGKLEKQLAKYQSKVLEIKTQMKEIIVNIFLMMS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA