Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563697

Identifier: 108563697

GI number: 108563697

Start: 1318342

End: 1319580

Strand: Direct

Name: 108563697

Synonym: HPAG1_1272

Alternate gene names: NA

Gene position: 1318342-1319580 (Clockwise)

Preceding gene: 108563696

Following gene: 108563698

Centisome position: 82.58

GC content: 34.62

Gene sequence:

>1239_bases
ATGCTATCTTTTATAAGCGCGTTTGATAAAAGGGGCGTTTCAATACGCTTTCTAACAGCTTTGTTACTGCTTTTTAGTTT
GGGTTTGGCTAAAGATTTAGAGATCCAATCTTTTGTGGCTAAATACCTTTCTAAAAATCAAAAAATACAAGCCCTACAAG
AGCAAATTGACGCTTTAAGTTCTCAAGAAAAAGCCGTTAGCAAATGGGATAACCCTATTTTGTATTTAGGCTATAACAAC
GCTAACGTGAGCGACTTTTTCAGGCTGGATAGCACCTTAATGCAAAACATGAGCTTGGGTTTGTCTCAAAAAGTGGATTT
AAATGGTAAAAAACTCACGCAATCTCAAATGATTAACTTAGAAAAGCAAAAAAAGATATTAGAGCTTAAAAAAACCAAGC
AGCAATTGGTGATTAATTTAATGATAAATGGCATTGAAAATTATAAAAACCAACAAGAAATAGAGCTTTTAAACACAGCG
ATTAAAAATTTAGAAAACACCCTTTATCAAGCCAACCATTCCAGTTCGCCCGATTTAATAGCGATCGCCAAGCTAGAAAT
TTTAAAATCGCAATTAGAAATCAAAAAAAACAATTTAGAAGAAGCGCTCTCTAGCAGCCATTATTCCATGGGTGAATTGA
CTTTTAAAGAAAACGAGCTTTTAAGCATTGCCCCTAAAAATTTTGAATTCAATAAGGAGCAAGAACTATATAACATTAAC
GCCACCAATTACGATATTGCGATCGCCAGGCTTGATGAAGAAAAATCGCAAAAAGACATCACTTTGGCTAAAAAAAGCTT
TTTAGAAGACGTGAATGTTACCGGGGTGTATTATTTCCGCTCCAAACAATACTATAACTATGACATGTTTAGCGTCGCTT
TGTCTATCCCCTTGCCTCTTTATGGCAAGCAAGCTAAATTAGTGGAGCAAAAGAAAAAAGAAAGCTTGGTGTTTAAAAGC
GAAGTGGAAAACACCAAAAACAAAACGCACCACCTGGCCCTAAAACTCCTTAAAAAATTAGAAACCTTGCAAAAAAACCT
AGAATCACTCAATAAAATCATCAAACAGAATGAAAAAATCGCGCAAATTTATGCGCTTGATTTGAAATCTAATAGCGATT
ACAACGCTTATTACAACGCTTTTAACGACAAAATCACTATCCAAATCACCCAGCTTGAAACCTTAAGCGCTCTAAATAGT
GCTTATTTGTCTTTACAAAACCTTAAAGGATTAGAATGA

Upstream 100 bases:

>100_bases
ACCAATCTTTCTATGAACGGGACATGGCAGGTGAGGGTGGATATTAAATCTAAAGAGGGCCAGGTTTATCGCGCTAAAAC
AAGCCTGGATTTATAAGTGC

Downstream 100 bases:

>100_bases
AACGGATTTTATTTTTAGCCTTGATTTTATTTTTTAGCCCCTTATTCGCTAACGCTCAAAAAACTCAAGAAATTAAAGAA
ACTAAAGAAGCTAAAAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper Resistance Determinant CrdB; Copper Resistance Determinant Protein CrdB

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MLSFISAFDKRGVSIRFLTALLLLFSLGLAKDLEIQSFVAKYLSKNQKIQALQEQIDALSSQEKAVSKWDNPILYLGYNN
ANVSDFFRLDSTLMQNMSLGLSQKVDLNGKKLTQSQMINLEKQKKILELKKTKQQLVINLMINGIENYKNQQEIELLNTA
IKNLENTLYQANHSSSPDLIAIAKLEILKSQLEIKKNNLEEALSSSHYSMGELTFKENELLSIAPKNFEFNKEQELYNIN
ATNYDIAIARLDEEKSQKDITLAKKSFLEDVNVTGVYYFRSKQYYNYDMFSVALSIPLPLYGKQAKLVEQKKKESLVFKS
EVENTKNKTHHLALKLLKKLETLQKNLESLNKIIKQNEKIAQIYALDLKSNSDYNAYYNAFNDKITIQITQLETLSALNS
AYLSLQNLKGLE

Sequences:

>Translated_412_residues
MLSFISAFDKRGVSIRFLTALLLLFSLGLAKDLEIQSFVAKYLSKNQKIQALQEQIDALSSQEKAVSKWDNPILYLGYNN
ANVSDFFRLDSTLMQNMSLGLSQKVDLNGKKLTQSQMINLEKQKKILELKKTKQQLVINLMINGIENYKNQQEIELLNTA
IKNLENTLYQANHSSSPDLIAIAKLEILKSQLEIKKNNLEEALSSSHYSMGELTFKENELLSIAPKNFEFNKEQELYNIN
ATNYDIAIARLDEEKSQKDITLAKKSFLEDVNVTGVYYFRSKQYYNYDMFSVALSIPLPLYGKQAKLVEQKKKESLVFKS
EVENTKNKTHHLALKLLKKLETLQKNLESLNKIIKQNEKIAQIYALDLKSNSDYNAYYNAFNDKITIQITQLETLSALNS
AYLSLQNLKGLE
>Mature_412_residues
MLSFISAFDKRGVSIRFLTALLLLFSLGLAKDLEIQSFVAKYLSKNQKIQALQEQIDALSSQEKAVSKWDNPILYLGYNN
ANVSDFFRLDSTLMQNMSLGLSQKVDLNGKKLTQSQMINLEKQKKILELKKTKQQLVINLMINGIENYKNQQEIELLNTA
IKNLENTLYQANHSSSPDLIAIAKLEILKSQLEIKKNNLEEALSSSHYSMGELTFKENELLSIAPKNFEFNKEQELYNIN
ATNYDIAIARLDEEKSQKDITLAKKSFLEDVNVTGVYYFRSKQYYNYDMFSVALSIPLPLYGKQAKLVEQKKKESLVFKS
EVENTKNKTHHLALKLLKKLETLQKNLESLNKIIKQNEKIAQIYALDLKSNSDYNAYYNAFNDKITIQITQLETLSALNS
AYLSLQNLKGLE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47220; Mature: 47220

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSFISAFDKRGVSIRFLTALLLLFSLGLAKDLEIQSFVAKYLSKNQKIQALQEQIDALS
CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
SQEKAVSKWDNPILYLGYNNANVSDFFRLDSTLMQNMSLGLSQKVDLNGKKLTQSQMINL
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHCH
EKQKKILELKKTKQQLVINLMINGIENYKNQQEIELLNTAIKNLENTLYQANHSSSPDLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
AIAKLEILKSQLEIKKNNLEEALSSSHYSMGELTFKENELLSIAPKNFEFNKEQELYNIN
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCEEEEC
ATNYDIAIARLDEEKSQKDITLAKKSFLEDVNVTGVYYFRSKQYYNYDMFSVALSIPLPL
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHEEEECCCCC
YGKQAKLVEQKKKESLVFKSEVENTKNKTHHLALKLLKKLETLQKNLESLNKIIKQNEKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
AQIYALDLKSNSDYNAYYNAFNDKITIQITQLETLSALNSAYLSLQNLKGLE
EEEEEEEECCCCCCCHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLSFISAFDKRGVSIRFLTALLLLFSLGLAKDLEIQSFVAKYLSKNQKIQALQEQIDALS
CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
SQEKAVSKWDNPILYLGYNNANVSDFFRLDSTLMQNMSLGLSQKVDLNGKKLTQSQMINL
HHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHCH
EKQKKILELKKTKQQLVINLMINGIENYKNQQEIELLNTAIKNLENTLYQANHSSSPDLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE
AIAKLEILKSQLEIKKNNLEEALSSSHYSMGELTFKENELLSIAPKNFEFNKEQELYNIN
EHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEECCCCCCCCCCCCEEEEC
ATNYDIAIARLDEEKSQKDITLAKKSFLEDVNVTGVYYFRSKQYYNYDMFSVALSIPLPL
CCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHEEEECCCCC
YGKQAKLVEQKKKESLVFKSEVENTKNKTHHLALKLLKKLETLQKNLESLNKIIKQNEKI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
AQIYALDLKSNSDYNAYYNAFNDKITIQITQLETLSALNSAYLSLQNLKGLE
EEEEEEEECCCCCCCHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA