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The map label for this gene is nuoJ [H]

Identifier: 108563638

GI number: 108563638

Start: 1274703

End: 1275251

Strand: Direct

Name: nuoJ [H]

Synonym: HPAG1_1213

Alternate gene names: 108563638

Gene position: 1274703-1275251 (Clockwise)

Preceding gene: 108563637

Following gene: 108563639

Centisome position: 79.85

GC content: 42.44

Gene sequence:

>549_bases
ATGTTTGAAACCATTGCCTTTTATTTCTTTGCGATCCTTACTTTAAGCATGGCGTTAGTGGTGATCACCACCACGAATAT
CCTCTATGCCATTACCGCTCTTGCCAGCAGCATGGTTTTTATTTCCGCTTTTTTCTTTTTGCTAGACGCTGAGTTTTTGG
GCGTGGTGCAAATCACGGTGTATGTGGGTGCGGTCATTGTGATGTATGCGTTTGGCATGATGTTTTTCAACTCCGCTGCA
GAAGTGGTTGAACGCAAGCAAAGCCCTAAAATCTTGTGCACGCTTTCATTTGGCGTGGCAATATTACTCACCTTGATTTT
AAGCGCTCCTAGCATCGGCGAAAACCTTTCTAATCAAGTCAATTCCAACGCTATTGATGCGCAAATCCCTAATATTAAAG
CCATTGGTTATGTGCTTTTTACCAATTACCTCATCCCTTTTGAAGCGGCGGCTTTAATGCTTTTAGTCGCTATGGTTGGA
GGCATCGCTACAGGGATTCAAAAAATCCATGGGAAAAATCACACGCAATTTATAAAGGAATCTCTATGA

Upstream 100 bases:

>100_bases
CGCATGCAAGCCACCCCTTTAGATTATGTCCAAGAGCCATCAAAGGAAGAATCAAAAGAAGAGACTCCAACAAACCCAGA
AAGCAATAAGGGAGATGAAA

Downstream 100 bases:

>100_bases
TAGGGTTGAACCACTATTTGATTGTTTCAGGGTTGCTCTTTTGCATTGGTTTAGCGGGCATGCTGAAACGCAAAAACATT
CTGTTGCTCTTTTTTTCTAC

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITVYVGAVIVMYAFGMMFFNSAA
EVVERKQSPKILCTLSFGVAILLTLILSAPSIGENLSNQVNSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVG
GIATGIQKIHGKNHTQFIKESL

Sequences:

>Translated_182_residues
MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITVYVGAVIVMYAFGMMFFNSAA
EVVERKQSPKILCTLSFGVAILLTLILSAPSIGENLSNQVNSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVG
GIATGIQKIHGKNHTQFIKESL
>Mature_182_residues
MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITVYVGAVIVMYAFGMMFFNSAA
EVVERKQSPKILCTLSFGVAILLTLILSAPSIGENLSNQVNSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVG
GIATGIQKIHGKNHTQFIKESL

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cyto

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=170, Percent_Identity=32.3529411764706, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 19754; Mature: 19754

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCTLSFGVAILLTLILSAPSIGENLSNQV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHH
NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQKIHGKNHTQFIKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SL
CC
>Mature Secondary Structure
MFETIAFYFFAILTLSMALVVITTTNILYAITALASSMVFISAFFFLLDAEFLGVVQITV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGAVIVMYAFGMMFFNSAAEVVERKQSPKILCTLSFGVAILLTLILSAPSIGENLSNQV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHHHH
NSNAIDAQIPNIKAIGYVLFTNYLIPFEAAALMLLVAMVGGIATGIQKIHGKNHTQFIKE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]