| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is guaA [H]
Identifier: 108563408
GI number: 108563408
Start: 1033970
End: 1035496
Strand: Reverse
Name: guaA [H]
Synonym: HPAG1_0983
Alternate gene names: 108563408
Gene position: 1035496-1033970 (Counterclockwise)
Preceding gene: 108563409
Following gene: 108563407
Centisome position: 64.87
GC content: 41.58
Gene sequence:
>1527_bases ATGATTTTAGTATTAGATTTTGGGAGCCAATACACACAGCTGATTGCTAGAAGATTGAGAGAGAGTGGGATTTATGCAGA AATAGTCCCTTTTTTTGAAAGCATAGAAAACATTCAAAAAAAAGCCCCTAAAGGTTTGATTTTGAGTGGGGGGCCAGCGA GCGTGTACGCTAAAGACGCTTACAAGCCTAGCGAGAAAATCTTTGATTTGAATGTGCCGATTTTAGGGATTTGCTACGGC ATGCAATATTTGGTGGATTTTTTTGGGGGGGTAGTGGCTGGTGCGAACGAGCAAGAATTTGGTAAGGCTGTTTTAGAAAT CACTCAAGATTCTGTGATTTTTGAAGGCGTGAAAACCAAAAGCCTTGTGTGGATGAGCCATATGGATAAAGTCATAGAAT TGCCTAAAGGCTTCATTACCCTTGCAAAAAGCCCTAATTCCCCCCATTGCGCGATTGAAAACGGCAAGATTTTTGGCTTG CAATTCCACCCAGAAGTCATTCAAAGCGAAGAGGGGGGTAAGATTTTAGAAAATTTTGCCCTTTTAGTTTGCGACTGTGA AAAAACTTGGGGGATGCAGCATTTCGCTCAAAGAGAAATCGCGCGATTGAAAGAAAAAATTGCTAACGATAAGGTTTTGT GTGCGGTGAGTGGGGGCGTGGATTCTACGGTGGTCGCTACGCTATTATACAGAGCCATTAAGGATAATTTGATCGCTGTT TTTGTGGATCATGGCTTGTTGCGTAAAAATGAAAAAGAAAGGGTGCAAGCGATGTTTAAAGACTTGCAAATCCCCTTAAA CACGATAGACGCTAAAGGAATCTTTTTGTCTAAATTAAAGGGCGTGAGCGAGCCTGAATTGAAGCGAAAAATCATCGGCG AAACCTTTATTGAAGTGTTTGAAAAAGAAGCTAAGAAGCACCATTTAAAAGGCAAAATTGAGTTTTTAGCCCAAGGCACT TTATATCCTGATGTGATTGAATCCGTGAGCGTTAAAGGGCCTTCAAAAGTGATCAAAACCCACCATAATGTGGGCGGACT GCCTGAATGGATGGACTTTAAACTCATAGAGCCTTTAAGGGAGTTGTTTAAAGATGAGGCGCGTTTGTTGGGTAAGGAAT TGGGCATTAGCCAGGATTTTTTAATGCGCCACCCTTTTCCAGGGCCTGGGCTTGCTGTAAGGATTTTAGGCGAAGTCAGC GAGAGTAAGATCAAACGCTTGCAAGAAGCGGATTTTATTTTTATAGAGGAGCTTAAAAAAGCCAATTTGTATGACAAGGT TTGGCAAGCTTTTTGCGTGCTGTTGAATGTCAATTCTGTGGGGGTTATGGGGGATAACCGCACTTATGAAAACGCTATTT GTTTGAGAGCGGTAAATGCGAGCGACGGCATGACAGCGAGTTTTTCATTTTTAGAGCATTCTTTTTTAGAAAAGGTTTCT AATCGTATCACTAATGAAGTGAGCGGTATCAATAGGGTGGTGTATGATATTACTTCTAAGCCACCAGGAACGATTGAATG GGAATGA
Upstream 100 bases:
>100_bases TGGTTTGTGCAAAAAGTGCCCGCATTGGCTGAAAGCTATAGGGTGAATTACAAGAATCAATACAATAAAACACAGATCCC ACAAAAATAAAGAATGAGCG
Downstream 100 bases:
>100_bases TTATCTTAAAAAATAGCGCTAAAAGTGGGATTTTTTGGGTAAGATTAGGAATTGATTTTAAAGAAAAAGAAAGAAAGGAA GTTAATGAAAAAAGGTAGTT
Product: GMP synthase
Products: NA
Alternate protein names: GMP synthetase; Glutamine amidotransferase [H]
Number of amino acids: Translated: 508; Mature: 508
Protein sequence:
>508_residues MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSEKIFDLNVPILGICYG MQYLVDFFGGVVAGANEQEFGKAVLEITQDSVIFEGVKTKSLVWMSHMDKVIELPKGFITLAKSPNSPHCAIENGKIFGL QFHPEVIQSEEGGKILENFALLVCDCEKTWGMQHFAQREIARLKEKIANDKVLCAVSGGVDSTVVATLLYRAIKDNLIAV FVDHGLLRKNEKERVQAMFKDLQIPLNTIDAKGIFLSKLKGVSEPELKRKIIGETFIEVFEKEAKKHHLKGKIEFLAQGT LYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKELGISQDFLMRHPFPGPGLAVRILGEVS ESKIKRLQEADFIFIEELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS NRITNEVSGINRVVYDITSKPPGTIEWE
Sequences:
>Translated_508_residues MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSEKIFDLNVPILGICYG MQYLVDFFGGVVAGANEQEFGKAVLEITQDSVIFEGVKTKSLVWMSHMDKVIELPKGFITLAKSPNSPHCAIENGKIFGL QFHPEVIQSEEGGKILENFALLVCDCEKTWGMQHFAQREIARLKEKIANDKVLCAVSGGVDSTVVATLLYRAIKDNLIAV FVDHGLLRKNEKERVQAMFKDLQIPLNTIDAKGIFLSKLKGVSEPELKRKIIGETFIEVFEKEAKKHHLKGKIEFLAQGT LYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKELGISQDFLMRHPFPGPGLAVRILGEVS ESKIKRLQEADFIFIEELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS NRITNEVSGINRVVYDITSKPPGTIEWE >Mature_508_residues MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSEKIFDLNVPILGICYG MQYLVDFFGGVVAGANEQEFGKAVLEITQDSVIFEGVKTKSLVWMSHMDKVIELPKGFITLAKSPNSPHCAIENGKIFGL QFHPEVIQSEEGGKILENFALLVCDCEKTWGMQHFAQREIARLKEKIANDKVLCAVSGGVDSTVVATLLYRAIKDNLIAV FVDHGLLRKNEKERVQAMFKDLQIPLNTIDAKGIFLSKLKGVSEPELKRKIIGETFIEVFEKEAKKHHLKGKIEFLAQGT LYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEARLLGKELGISQDFLMRHPFPGPGLAVRILGEVS ESKIKRLQEADFIFIEELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS NRITNEVSGINRVVYDITSKPPGTIEWE
Specific function: Catalyzes the synthesis of GMP from XMP [H]
COG id: COG0519
COG function: function code F; GMP synthase, PP-ATPase domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GMP-binding domain [H]
Homologues:
Organism=Homo sapiens, GI4504035, Length=545, Percent_Identity=35.045871559633, Blast_Score=290, Evalue=3e-78, Organism=Escherichia coli, GI1788854, Length=519, Percent_Identity=51.252408477842, Blast_Score=514, Evalue=1e-147, Organism=Escherichia coli, GI1787517, Length=184, Percent_Identity=31.5217391304348, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992710, Length=566, Percent_Identity=33.0388692579505, Blast_Score=268, Evalue=5e-72, Organism=Caenorhabditis elegans, GI71992717, Length=566, Percent_Identity=33.0388692579505, Blast_Score=268, Evalue=5e-72, Organism=Caenorhabditis elegans, GI133901714, Length=566, Percent_Identity=33.5689045936396, Blast_Score=268, Evalue=6e-72, Organism=Saccharomyces cerevisiae, GI6323873, Length=514, Percent_Identity=56.420233463035, Blast_Score=552, Evalue=1e-158, Organism=Drosophila melanogaster, GI281365319, Length=543, Percent_Identity=34.8066298342541, Blast_Score=270, Evalue=1e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006220 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR001674 - InterPro: IPR004739 - InterPro: IPR022955 - InterPro: IPR022310 - InterPro: IPR014729 [H]
Pfam domain/function: PF00117 GATase; PF00958 GMP_synt_C; PF02540 NAD_synthase [H]
EC number: =6.3.5.2 [H]
Molecular weight: Translated: 56827; Mature: 56827
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDA CEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCC YKPSEKIFDLNVPILGICYGMQYLVDFFGGVVAGANEQEFGKAVLEITQDSVIFEGVKTK CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCHH SLVWMSHMDKVIELPKGFITLAKSPNSPHCAIENGKIFGLQFHPEVIQSEEGGKILENFA HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCEEEEEEECHHHHCCCCCCHHHHCCE LLVCDCEKTWGMQHFAQREIARLKEKIANDKVLCAVSGGVDSTVVATLLYRAIKDNLIAV EEEEECHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEE FVDHGLLRKNEKERVQAMFKDLQIPLNTIDAKGIFLSKLKGVSEPELKRKIIGETFIEVF EECCHHHCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH EKEAKKHHLKGKIEFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLR HHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH ELFKDEARLLGKELGISQDFLMRHPFPGPGLAVRILGEVSESKIKRLQEADFIFIEELKK HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHH ANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH NRITNEVSGINRVVYDITSKPPGTIEWE HHHHHHHHHHHHEEEEECCCCCCCCCCC >Mature Secondary Structure MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDA CEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEECCC YKPSEKIFDLNVPILGICYGMQYLVDFFGGVVAGANEQEFGKAVLEITQDSVIFEGVKTK CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCHH SLVWMSHMDKVIELPKGFITLAKSPNSPHCAIENGKIFGLQFHPEVIQSEEGGKILENFA HHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCEEEEEEECHHHHCCCCCCHHHHCCE LLVCDCEKTWGMQHFAQREIARLKEKIANDKVLCAVSGGVDSTVVATLLYRAIKDNLIAV EEEEECHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHCCEEEE FVDHGLLRKNEKERVQAMFKDLQIPLNTIDAKGIFLSKLKGVSEPELKRKIIGETFIEVF EECCHHHCCCHHHHHHHHHHHHCCCHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHH EKEAKKHHLKGKIEFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLR HHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHH ELFKDEARLLGKELGISQDFLMRHPFPGPGLAVRILGEVSESKIKRLQEADFIFIEELKK HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCHHHHHHHHH ANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVS CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHH NRITNEVSGINRVVYDITSKPPGTIEWE HHHHHHHHHHHHEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA