Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

Click here to switch to the map view.

The map label for this gene is 108563405

Identifier: 108563405

GI number: 108563405

Start: 1032378

End: 1032476

Strand: Reverse

Name: 108563405

Synonym: HPAG1_0980

Alternate gene names: NA

Gene position: 1032476-1032378 (Counterclockwise)

Preceding gene: 108563407

Following gene: 108563404

Centisome position: 64.68

GC content: 31.31

Gene sequence:

>99_bases
ATGGATTCTTTAGAGTGGGGATTACTCATTTTCTTGATTCTTGTTTTTCTTATAGGCATAGGGTACTACATTTTTATGGT
TCTTTCTTCTAAAGATTGA

Upstream 100 bases:

>100_bases
CTTGTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCCGTAGGTCGCAGGTTCGAGTCCTGCCAAGCGCACCACTTTTG
ACATTCTTTAAAGAGGAGTT

Downstream 100 bases:

>100_bases
TCATCAAAATAGCTCAATCACAAGAAGTAGGGTTGGAAACTCCTAAAACACAAATCTTACATGAAAACATTCAATAAAAG
CGGTTACAAAAATCCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 32; Mature: 32

Protein sequence:

>32_residues
MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD

Sequences:

>Translated_32_residues
MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD
>Mature_32_residues
MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 3711; Mature: 3711

Theoretical pI: Translated: 3.88; Mature: 3.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA