| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563405
Identifier: 108563405
GI number: 108563405
Start: 1032378
End: 1032476
Strand: Reverse
Name: 108563405
Synonym: HPAG1_0980
Alternate gene names: NA
Gene position: 1032476-1032378 (Counterclockwise)
Preceding gene: 108563407
Following gene: 108563404
Centisome position: 64.68
GC content: 31.31
Gene sequence:
>99_bases ATGGATTCTTTAGAGTGGGGATTACTCATTTTCTTGATTCTTGTTTTTCTTATAGGCATAGGGTACTACATTTTTATGGT TCTTTCTTCTAAAGATTGA
Upstream 100 bases:
>100_bases CTTGTAGCTCAGCTGGATAGAGCAACAGCCTTCTAAGCCGTAGGTCGCAGGTTCGAGTCCTGCCAAGCGCACCACTTTTG ACATTCTTTAAAGAGGAGTT
Downstream 100 bases:
>100_bases TCATCAAAATAGCTCAATCACAAGAAGTAGGGTTGGAAACTCCTAAAACACAAATCTTACATGAAAACATTCAATAAAAG CGGTTACAAAAATCCAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 32; Mature: 32
Protein sequence:
>32_residues MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD
Sequences:
>Translated_32_residues MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD >Mature_32_residues MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3711; Mature: 3711
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDSLEWGLLIFLILVFLIGIGYYIFMVLSSKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA