Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563389

Identifier: 108563389

GI number: 108563389

Start: 1011239

End: 1011430

Strand: Reverse

Name: 108563389

Synonym: HPAG1_0964

Alternate gene names: NA

Gene position: 1011430-1011239 (Counterclockwise)

Preceding gene: 108563390

Following gene: 108563388

Centisome position: 63.36

GC content: 41.15

Gene sequence:

>192_bases
ATGCGAAAATCTTATAGAGCGGTATCTGTTGATAGAGTAACGATAAAATCCATTAAAGCCAAGCTAGGGAAAAACCATTG
CCATATAGTGAGCGGTAGCTACCAAGTAGGGGGTGTGCGTAAAGTGGCTTCTAGGTTCAACACTAAAAAACCCTTTTTCA
TTAGACAGCGTGCTAAAAGCCAATCCCTTTGA

Upstream 100 bases:

>100_bases
GATTGCTAACCACATCAATATTGACCAAAATTGAGAAAGCCCCAACTCCCCTAAATTCTTAAAGAATTACTCAGAGACTT
TTAAACACACCATAGCCTTT

Downstream 100 bases:

>100_bases
CACTGGCATTGGATTGGGCGTTTGAGTTGTGGATAATAAGGTTAGTCCTAAACATGCTAACATGTCAAATTAGCTACATA
AGAATAAGTTATCTTGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 63; Mature: 63

Protein sequence:

>63_residues
MRKSYRAVSVDRVTIKSIKAKLGKNHCHIVSGSYQVGGVRKVASRFNTKKPFFIRQRAKSQSL

Sequences:

>Translated_63_residues
MRKSYRAVSVDRVTIKSIKAKLGKNHCHIVSGSYQVGGVRKVASRFNTKKPFFIRQRAKSQSL
>Mature_63_residues
MRKSYRAVSVDRVTIKSIKAKLGKNHCHIVSGSYQVGGVRKVASRFNTKKPFFIRQRAKSQSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7151; Mature: 7151

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKSYRAVSVDRVTIKSIKAKLGKNHCHIVSGSYQVGGVRKVASRFNTKKPFFIRQRAKS
CCCCCCCEECCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCEECCCCC
QSL
CCC
>Mature Secondary Structure
MRKSYRAVSVDRVTIKSIKAKLGKNHCHIVSGSYQVGGVRKVASRFNTKKPFFIRQRAKS
CCCCCCCEECCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCCCCCCEECCCCC
QSL
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA