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The map label for this gene is fliY [C]

Identifier: 108563348

GI number: 108563348

Start: 966510

End: 967280

Strand: Reverse

Name: fliY [C]

Synonym: HPAG1_0923

Alternate gene names: 108563348

Gene position: 967280-966510 (Counterclockwise)

Preceding gene: 108563349

Following gene: 108563347

Centisome position: 60.59

GC content: 40.99

Gene sequence:

>771_bases
ATGAAAAAAGTTTTATTTTTATTAGTAATAAGCTTTTTTGGGGGTTTTTTGAACGCTTCTGGCTTGTATGAAAAACTGAT
TAATAAAGAAACGATCAGCGTTGGCACAGAAGGCATTTACCCCCCTTTCACTTACCATAATAAAGAGGGCAAGCTCACTG
GCTATGATGTGGAAGTGGCTAGGGAGTTGGCTAAAGAGCTTGGCGTGAAAATCAAATTCCACGAAACTTCATGGGATATC
ATGCTGACAGGTTTGAAATCGGGGCGTTTTGATATGGTCGCTAACCAGGTGAGTTTGACGACTAAAAAACGCCAAGCGGC
TTTTGATAAAAGCTTGCCTTATAGCTATTCAGGCACCATTATGCTGGTCAGGAAAGATGAAAACCGCATTAAAGACATTA
AAGACATTAAGGGTTTGAGGGCGGCTAACACTTTAAGCTCCACTTATGGGGAAATCGCTTTCAAATACGACGCTCAAATC
GTTTCGGTAGATTCTATGGCGCAAGCTTTGTTGCTGGTGGCGCAAAAACGAGCCGATTTGACCTTAAATAGTTCTTTAGC
GATCTTAAACTACCTTAACACCCACAAAGATAACCCCTTTAAAATCGCATGGGAATCCAAAGAAAAAGATGGGGGCGCTT
CCTTTGTCATCAACAAGCACCAAGAAAAAGCCTTAGAGCTTATCAACCAGGCGATGCAAAGATTGATCAATAAAGGGGTT
TTAAAACGCTTAAGCGAACAATTTTTTGGAAAAGATGTCAGCCAGCCATAA

Upstream 100 bases:

>100_bases
TCCAAACGCTTGGAGCGCGTCTATATTTAAAATCAAACCATGCAAAATTTTTATTTTGCGCTAGAATGCGCGAAAAATAA
TGATTAGGATTGATTAAAAA

Downstream 100 bases:

>100_bases
TTTGTCTTTGTTTTTTGAATCTTTAGATTTGAGCAAGGAGCGTTTGGAATTATTATTAGAGGCTTTCTACCCCATGCTAA
AAGCCGCTTTTTGCATTTCT

Product: amino acid ABC transporter, periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MKKVLFLLVISFFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVKIKFHETSWDI
MLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEIAFKYDAQI
VSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLINKGV
LKRLSEQFFGKDVSQP

Sequences:

>Translated_256_residues
MKKVLFLLVISFFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVKIKFHETSWDI
MLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEIAFKYDAQI
VSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLINKGV
LKRLSEQFFGKDVSQP
>Mature_256_residues
MKKVLFLLVISFFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVARELAKELGVKIKFHETSWDI
MLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTIMLVRKDENRIKDIKDIKGLRAANTLSSTYGEIAFKYDAQI
VSVDSMAQALLLVAQKRADLTLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLINKGV
LKRLSEQFFGKDVSQP

Specific function: Probably part of a binding-protein-dependent transport system for an amino acid [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=243, Percent_Identity=36.6255144032922, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1787085, Length=228, Percent_Identity=23.2456140350877, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788648, Length=234, Percent_Identity=23.9316239316239, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787088, Length=259, Percent_Identity=24.3243243243243, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788649, Length=105, Percent_Identity=29.5238095238095, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787031, Length=224, Percent_Identity=25.4464285714286, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 28768; Mature: 28768

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLFLLVISFFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVA
CHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHEECCCCCCCCCCCEECCCCCEECCHHHHH
RELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTI
HHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
MLVRKDENRIKDIKDIKGLRAANTLSSTYGEIAFKYDAQIVSVDSMAQALLLVAQKRADL
EEEECCCHHHHHHHHHHCHHHHHHHHHHHHCEEEEECCEEEEHHHHHHHHHHHHHHHCCE
TLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLINKGV
EECCHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
LKRLSEQFFGKDVSQP
HHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKKVLFLLVISFFGGFLNASGLYEKLINKETISVGTEGIYPPFTYHNKEGKLTGYDVEVA
CHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHEECCCCCCCCCCCEECCCCCEECCHHHHH
RELAKELGVKIKFHETSWDIMLTGLKSGRFDMVANQVSLTTKKRQAAFDKSLPYSYSGTI
HHHHHHHCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEE
MLVRKDENRIKDIKDIKGLRAANTLSSTYGEIAFKYDAQIVSVDSMAQALLLVAQKRADL
EEEECCCHHHHHHHHHHCHHHHHHHHHHHHCEEEEECCEEEEHHHHHHHHHHHHHHHCCE
TLNSSLAILNYLNTHKDNPFKIAWESKEKDGGASFVINKHQEKALELINQAMQRLINKGV
EECCHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHH
LKRLSEQFFGKDVSQP
HHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]