| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563319
Identifier: 108563319
GI number: 108563319
Start: 931282
End: 931470
Strand: Reverse
Name: 108563319
Synonym: HPAG1_0894
Alternate gene names: NA
Gene position: 931470-931282 (Counterclockwise)
Preceding gene: 108563322
Following gene: 108563312
Centisome position: 58.35
GC content: 29.63
Gene sequence:
>189_bases TTGTGGTATTTTCACATAAGAAAAATTAAACTAACCTTAAAAATCCCCTTACAAACCCCTTATCAAGGAAATAAAGTTAC AACAATTGGAGCGTTTTTTACAAAAAAAAAAAAAACGGGATTTCATGGGGGGATTAGCCTTAATTTTTGGGGTTTTAAAA ACGCTTTTTGGTATTTTTGGGTTTTTTAA
Upstream 100 bases:
>100_bases TTCCTTATCAATGGGATGCTCCTTGATTGAGATTAAATTTGGGATTTAGTTACATCAGAGCTTGTAAATAATGTTTAGTA ATACAAATTGTCAAATGTAA
Downstream 100 bases:
>100_bases TGTAAAATCGCACCAACGCAAATAGTCATTTTAAGTTATCTCTTTTGTTGCGAAAATTTGGAGCATGTTAGGGTTTGGGG TGATAGCGGGTGGTTACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MWYFHIRKIKLTLKIPLQTPYQGNKVTTIGAFFTKKKKTGFHGGISLNFWGFKNAFWYFWVF
Sequences:
>Translated_62_residues MWYFHIRKIKLTLKIPLQTPYQGNKVTTIGAFFTKKKKTGFHGGISLNFWGFKNAFWYFWVF >Mature_62_residues MWYFHIRKIKLTLKIPLQTPYQGNKVTTIGAFFTKKKKTGFHGGISLNFWGFKNAFWYFWVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7480; Mature: 7480
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYFHIRKIKLTLKIPLQTPYQGNKVTTIGAFFTKKKKTGFHGGISLNFWGFKNAFWYFW CEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEE VF EC >Mature Secondary Structure MWYFHIRKIKLTLKIPLQTPYQGNKVTTIGAFFTKKKKTGFHGGISLNFWGFKNAFWYFW CEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCCCEEEEEEECCCCEEEEE VF EC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA