| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is pta [H]
Identifier: 108563311
GI number: 108563311
Start: 921268
End: 922122
Strand: Reverse
Name: pta [H]
Synonym: HPAG1_0886
Alternate gene names: 108563311
Gene position: 922122-921268 (Counterclockwise)
Preceding gene: 108563312
Following gene: 108563310
Centisome position: 57.76
GC content: 40.12
Gene sequence:
>855_bases TTGGGAGGGCGTGAGGGTTTTTGGGAGCGCTATGGCTTGAACTCTTTAGAGTTTCATAGCGCCATAGACAAACAAAAGGC TTTAGAGCTTGTAAGCACCGCTCAAGAAGAGTTACTCTTTGAAACGATTCTCAAACGCTATGATGAATTACAATCCACGC ATGATTTTGTCATTAATTTAGGGTATGCGCCGAAGTTTTTCTTAAACGCTCTTTTAGATTTAAACACCATTTTAGCCAAG CATTTAAACGCTCCTATGGTGGCTGTCGTGCAAACGAGTTTGGAATATTTGAAAGCCATGCATTCTCATATCCTCAAAAA AGAAGCCCCTTTCGCTGTAGGGTTATTTGCGGGCGAAATGCTTGAAAAACCACATTTTTTGAGCGCGTCTCTTTGCAAGC AGCAATGCGAATTAGAAGAGGATCTGATAGAAAGCGTGTTGCAAATAAAAAGCGAGATTATTACCCCTTTAGCCTTTCAA ATGGGTTTGGAAAAAAAGGCTAAAAAACAGATTAAAAAAGTGGTTTTACCAGAGAGCGAAGATGAAAGGATTTTAAAAGC CGTGCATCGTTTGAACGCTATGGGCACGGTAGGATTGATCTTATTAGGCGATAAAGAGGTTATTAATTCCCAAGCGAAAA ATTTGAACTTGAATTTGGAAAATGTGGAAATCATTGATCCTAACACTTCTCATTATAGAGAAGAGTTCGCTAATCATTTG TATGAATTACGAAAATCAAAGGGCTTGAGTGAGCAAGAAGCTAAGCAATTGGTGCTGGATAAGACTTATTTTGCGACCAT GCTCGTGCATTCAGGCTATGCGCATGCGATGGTTTCTGGGGTGAATCACAGCTGA
Upstream 100 bases:
>100_bases TGGATTTATCCAGAGAATACAGAAGTTTTAGGGGTTGCTTGTAAGAGCCTTTTAAAAGCGCTAAAACCGCGCTATCAAAA AATCGCCTTGTTTTCGCCCA
Downstream 100 bases:
>100_bases GACCATTAGACCCGCTTTACAAATCATTAAGACTAAGCCTGGCGTGAGTTTGGTTTCAAGCGTGTTTTTAATGTGTTTAG ACACTCAAGTGCTAGTTTTT
Product: phosphotransacetylase
Products: NA
Alternate protein names: Phosphotransacetylase [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MGGREGFWERYGLNSLEFHSAIDKQKALELVSTAQEELLFETILKRYDELQSTHDFVINLGYAPKFFLNALLDLNTILAK HLNAPMVAVVQTSLEYLKAMHSHILKKEAPFAVGLFAGEMLEKPHFLSASLCKQQCELEEDLIESVLQIKSEIITPLAFQ MGLEKKAKKQIKKVVLPESEDERILKAVHRLNAMGTVGLILLGDKEVINSQAKNLNLNLENVEIIDPNTSHYREEFANHL YELRKSKGLSEQEAKQLVLDKTYFATMLVHSGYAHAMVSGVNHS
Sequences:
>Translated_284_residues MGGREGFWERYGLNSLEFHSAIDKQKALELVSTAQEELLFETILKRYDELQSTHDFVINLGYAPKFFLNALLDLNTILAK HLNAPMVAVVQTSLEYLKAMHSHILKKEAPFAVGLFAGEMLEKPHFLSASLCKQQCELEEDLIESVLQIKSEIITPLAFQ MGLEKKAKKQIKKVVLPESEDERILKAVHRLNAMGTVGLILLGDKEVINSQAKNLNLNLENVEIIDPNTSHYREEFANHL YELRKSKGLSEQEAKQLVLDKTYFATMLVHSGYAHAMVSGVNHS >Mature_283_residues GGREGFWERYGLNSLEFHSAIDKQKALELVSTAQEELLFETILKRYDELQSTHDFVINLGYAPKFFLNALLDLNTILAKH LNAPMVAVVQTSLEYLKAMHSHILKKEAPFAVGLFAGEMLEKPHFLSASLCKQQCELEEDLIESVLQIKSEIITPLAFQM GLEKKAKKQIKKVVLPESEDERILKAVHRLNAMGTVGLILLGDKEVINSQAKNLNLNLENVEIIDPNTSHYREEFANHLY ELRKSKGLSEQEAKQLVLDKTYFATMLVHSGYAHAMVSGVNHS
Specific function: Conversion of acetate to acetyl-CoA; second step. [C]
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788635, Length=150, Percent_Identity=32, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788806, Length=126, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: 1420 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1250 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004614 - InterPro: IPR002505 [H]
Pfam domain/function: PF01515 PTA_PTB [H]
EC number: =2.3.1.8 [H]
Molecular weight: Translated: 32090; Mature: 31958
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGREGFWERYGLNSLEFHSAIDKQKALELVSTAQEELLFETILKRYDELQSTHDFVINL CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC GYAPKFFLNALLDLNTILAKHLNAPMVAVVQTSLEYLKAMHSHILKKEAPFAVGLFAGEM CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LEKPHFLSASLCKQQCELEEDLIESVLQIKSEIITPLAFQMGLEKKAKKQIKKVVLPESE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC DERILKAVHRLNAMGTVGLILLGDKEVINSQAKNLNLNLENVEIIDPNTSHYREEFANHL HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH YELRKSKGLSEQEAKQLVLDKTYFATMLVHSGYAHAMVSGVNHS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC >Mature Secondary Structure GGREGFWERYGLNSLEFHSAIDKQKALELVSTAQEELLFETILKRYDELQSTHDFVINL CCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC GYAPKFFLNALLDLNTILAKHLNAPMVAVVQTSLEYLKAMHSHILKKEAPFAVGLFAGEM CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LEKPHFLSASLCKQQCELEEDLIESVLQIKSEIITPLAFQMGLEKKAKKQIKKVVLPESE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCC DERILKAVHRLNAMGTVGLILLGDKEVINSQAKNLNLNLENVEIIDPNTSHYREEFANHL HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHH YELRKSKGLSEQEAKQLVLDKTYFATMLVHSGYAHAMVSGVNHS HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]