Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is ackA [H]

Identifier: 108563308

GI number: 108563308

Start: 919787

End: 920053

Strand: Reverse

Name: ackA [H]

Synonym: HPAG1_0883

Alternate gene names: 108563308

Gene position: 920053-919787 (Counterclockwise)

Preceding gene: 108563309

Following gene: 108563307

Centisome position: 57.63

GC content: 39.33

Gene sequence:

>267_bases
GTGGGGATAATGAGAAACATAGAAGCTAGAAAGGAAAAAGGCGATAAACAAGCCAAGCTCGCTTTTGAAATGTGTGCTTA
TCGCATTAAAAAGTATATTGGGGCTTACATGGTAGTCTTAAAAAAAGTAGATGCGATCATTTTTACAGGGGGATTAGGGG
AAAACTACTCGGCTTTAAGAGAGAGCGTGTGTGAAGGCTTAGAAAATTTAGGGATCGCTTTATGTAAGCCCACTAATGAT
AATCTGGGCAATGGGTTGGTGAATTAA

Upstream 100 bases:

>100_bases
ATTGACCCCACTGTGGTGGAATACATTGCGCAATGCGCAAATAAGAGCTTAGAAGAAGTGATGAAAATTTTAAATCATGA
AAGCGGCTTGAAAGGCATTT

Downstream 100 bases:

>100_bases
GCCAGCCTAACACCAAAATCCAGGTTTTACGAATCCCTACTGATGAAGAATTAGAAATCGCTTTGCAAACCAAAAAGGTT
TTGGAAAAAAACAGAATAAA

Product: acetate kinase

Products: NA

Alternate protein names: Acetokinase [H]

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MGIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALRESVCEGLENLGIALCKPTND
NLGNGLVN

Sequences:

>Translated_88_residues
MGIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALRESVCEGLENLGIALCKPTND
NLGNGLVN
>Mature_87_residues
GIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALRESVCEGLENLGIALCKPTNDN
LGNGLVN

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0282

COG function: function code C; Acetate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acetokinase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000890
- InterPro:   IPR004372 [H]

Pfam domain/function: PF00871 Acetate_kinase [H]

EC number: =2.7.2.1 [H]

Molecular weight: Translated: 9673; Mature: 9541

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALR
CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHH
ESVCEGLENLGIALCKPTNDNLGNGLVN
HHHHHHHHHCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
GIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALR
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHH
ESVCEGLENLGIALCKPTNDNLGNGLVN
HHHHHHHHHCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]