| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
Click here to switch to the map view.
The map label for this gene is ackA [H]
Identifier: 108563308
GI number: 108563308
Start: 919787
End: 920053
Strand: Reverse
Name: ackA [H]
Synonym: HPAG1_0883
Alternate gene names: 108563308
Gene position: 920053-919787 (Counterclockwise)
Preceding gene: 108563309
Following gene: 108563307
Centisome position: 57.63
GC content: 39.33
Gene sequence:
>267_bases GTGGGGATAATGAGAAACATAGAAGCTAGAAAGGAAAAAGGCGATAAACAAGCCAAGCTCGCTTTTGAAATGTGTGCTTA TCGCATTAAAAAGTATATTGGGGCTTACATGGTAGTCTTAAAAAAAGTAGATGCGATCATTTTTACAGGGGGATTAGGGG AAAACTACTCGGCTTTAAGAGAGAGCGTGTGTGAAGGCTTAGAAAATTTAGGGATCGCTTTATGTAAGCCCACTAATGAT AATCTGGGCAATGGGTTGGTGAATTAA
Upstream 100 bases:
>100_bases ATTGACCCCACTGTGGTGGAATACATTGCGCAATGCGCAAATAAGAGCTTAGAAGAAGTGATGAAAATTTTAAATCATGA AAGCGGCTTGAAAGGCATTT
Downstream 100 bases:
>100_bases GCCAGCCTAACACCAAAATCCAGGTTTTACGAATCCCTACTGATGAAGAATTAGAAATCGCTTTGCAAACCAAAAAGGTT TTGGAAAAAAACAGAATAAA
Product: acetate kinase
Products: NA
Alternate protein names: Acetokinase [H]
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MGIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALRESVCEGLENLGIALCKPTND NLGNGLVN
Sequences:
>Translated_88_residues MGIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALRESVCEGLENLGIALCKPTND NLGNGLVN >Mature_87_residues GIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALRESVCEGLENLGIALCKPTNDN LGNGLVN
Specific function: Anaerobic degradation of L-threonine to propionate. [C]
COG id: COG0282
COG function: function code C; Acetate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetokinase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000890 - InterPro: IPR004372 [H]
Pfam domain/function: PF00871 Acetate_kinase [H]
EC number: =2.7.2.1 [H]
Molecular weight: Translated: 9673; Mature: 9541
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALR CCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHH ESVCEGLENLGIALCKPTNDNLGNGLVN HHHHHHHHHCCEEEECCCCCCCCCCCCC >Mature Secondary Structure GIMRNIEARKEKGDKQAKLAFEMCAYRIKKYIGAYMVVLKKVDAIIFTGGLGENYSALR CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHH ESVCEGLENLGIALCKPTNDNLGNGLVN HHHHHHHHHCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]