| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563183
Identifier: 108563183
GI number: 108563183
Start: 793335
End: 794426
Strand: Reverse
Name: 108563183
Synonym: HPAG1_0758
Alternate gene names: NA
Gene position: 794426-793335 (Counterclockwise)
Preceding gene: 108563184
Following gene: 108563182
Centisome position: 49.76
GC content: 43.68
Gene sequence:
>1092_bases ATGGTATCAACACTCAAACCGCTAAAAATCGGTAAGCACACCATAAAATTCCCTATCTTTCAAGGGGGAATGGGTGTGGG GATTAGTTGGGATGAACTAGCTGGAAATGTTGCCAAAGAAGGGGCTTTAGGAGTGATTTCAGCCGTAGGGACTGGTTATT ATAAAAACATGCGTTTTGTAGAAAGGATTGTGGCTAAAAAACCCTTTGAAGCCTTGAATTTTTACTCCAAAAAAGCGTTG AATGAGATTTTTGCAAACGCTAGGAAGATTTGCGGGAACAAGCCTTTGGGGGCGAATATTTTATACGCTATCAATGACTA TGGCCGTGTTTTAAGGGATGCTTGTGAAGCGGGAGCGAATATCATTATTACAGGGGCTGGCTTGCCCACTAACATGCCTG AATTCGCTAAGGATTTTAGAGATGTGGCGCTTATCCCTATTATTTCTTCAGCGAAGGCTTTAAAAATCCTTTGTAAAAGA TGGAGCGATCGCTATAAAAGAATCCCGGACGCATTCATTGTGGAAGGGCCTTTGAGTGGGGGGCATCAGGGCTTTAAATA CGAAGATTGTTTCAAAGAAGAATTCCGATTAGAAAACTTAGTGCCTAAAGTCGTGGAAGCTTCTAAAGAATGGGGGAATA TCCCTATCATCGCTGCTGGGGGGATTTGGGATAGGAAGGATATAGACACCATGTTGAGTCTTGGAGCGAGTGGGGTGCAA ATGGCGACTCGTTTTTTAGGCACGAAAGAATGCGACGCTAAAGTGTATGCCGATCTTTTGCCCACGCTCAAAAAAGAAGA TATTTTACTCATTAAATCGCCTGTAGGCTATCCGGCTAGGGCTATTAATACGGGAGTGATCAAACGCATTGAAGAGGGTA ACGCACCCAAAATCGCATGCGTGAGCAATTGTGTAGCGCCTTGTAACAGGGGTGAAGAGGCTAAAAAGGTGGGCTATTGT ATCGCTGATGGTTTGGGGCGCAGTTATTTAGGAAACAGAGAAGAGGGGCTTTATTTTACCGGGGCTAATGGCTATAGAGT GGATAAGATTATCAGCGTGCATGAATTGATTAAAGAGCTTACAGAGGGTTAA
Upstream 100 bases:
>100_bases AAAAATGAGAGTTATCGTTTTGTTAAAGGAAATTATGTTATACAGCTTGGTAAGAAAAGATTTATGAAATTAAATATTAA CTAATATTAAGGAAAGAGCT
Downstream 100 bases:
>100_bases TTTGTAGTGCTTGTGAGGTTAGGGGTTGTTGCATGTCTTTTTTGGTTGCATTTTGCTTATGCTACAACCCTTAAAATTAC CAACATTGTGCCTTTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase II; Oxidoreductase 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Family Oxidoreductase; Dioxygenase; 2-Nitropropane Dioxygenase-Like Protein; Oxidoreductase; Dioxygenase Related 2-Nitropropane Dioxygenase; Enoyl-[Acyl-Carrier Protein] Reductase; 2-Nitropropane Dioxygenase Npd; Oxidoreductase 2-Nitropropane Dioxygenase Family Protein; Dioxygenases Related 2-Nitropropane Dioxygenase; Enoyl-(Acyl-Carrier-Protein) Reductase; Enoyl-[Acyl-Carrier-Protein] Reductase; 2-Nitropropane Dioxygenase-Like; Trans-2-Enoyl-ACP Reductase; Enoyl-(Acyl-Carrier-Protein) Reductase FabK; 2-Nitropropane Dioxygenase Family; Flavin-Containing Oxidoreductase; 2-Nitropropane Dioxygenase Family Protein; 2-Nitropropane Dioxygenase-Releated Protein; 2-Nitropropane Dioxygenase-Like Dioxygenase
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNFYSKKAL NEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGANIIITGAGLPTNMPEFAKDFRDVALIPIISSAKALKILCKR WSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ MATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSNCVAPCNRGEEAKKVGYC IADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKELTEG
Sequences:
>Translated_363_residues MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNFYSKKAL NEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGANIIITGAGLPTNMPEFAKDFRDVALIPIISSAKALKILCKR WSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ MATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSNCVAPCNRGEEAKKVGYC IADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKELTEG >Mature_363_residues MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFVERIVAKKPFEALNFYSKKAL NEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGANIIITGAGLPTNMPEFAKDFRDVALIPIISSAKALKILCKR WSDRYKRIPDAFIVEGPLSGGHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ MATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIACVSNCVAPCNRGEEAKKVGYC IADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKELTEG
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39660; Mature: 39660
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV CCCCCCCHHCCCEEEEEEEEECCCCCCCCHHHHHCHHHHCCCHHHHHHHHCCHHHHHHHH ERIVAKKPFEALNFYSKKALNEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGAN HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCC IIITGAGLPTNMPEFAKDFRDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG EEEECCCCCCCCHHHHHHHHHEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC GHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCHHH MATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC HHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEHH VSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL HHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH TEG HCC >Mature Secondary Structure MVSTLKPLKIGKHTIKFPIFQGGMGVGISWDELAGNVAKEGALGVISAVGTGYYKNMRFV CCCCCCCHHCCCEEEEEEEEECCCCCCCCHHHHHCHHHHCCCHHHHHHHHCCHHHHHHHH ERIVAKKPFEALNFYSKKALNEIFANARKICGNKPLGANILYAINDYGRVLRDACEAGAN HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHCCCC IIITGAGLPTNMPEFAKDFRDVALIPIISSAKALKILCKRWSDRYKRIPDAFIVEGPLSG EEEECCCCCCCCHHHHHHHHHEEEEHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC GHQGFKYEDCFKEEFRLENLVPKVVEASKEWGNIPIIAAGGIWDRKDIDTMLSLGASGVQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCHHH MATRFLGTKECDAKVYADLLPTLKKEDILLIKSPVGYPARAINTGVIKRIEEGNAPKIAC HHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEHH VSNCVAPCNRGEEAKKVGYCIADGLGRSYLGNREEGLYFTGANGYRVDKIISVHELIKEL HHHHHHCCCCCCHHHHHHHHHHHCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHH TEG HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA