| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is 108563154
Identifier: 108563154
GI number: 108563154
Start: 766980
End: 767435
Strand: Reverse
Name: 108563154
Synonym: HPAG1_0729
Alternate gene names: NA
Gene position: 767435-766980 (Counterclockwise)
Preceding gene: 108563170
Following gene: 108563153
Centisome position: 48.07
GC content: 37.06
Gene sequence:
>456_bases ATGGAAAACAACGAAAATCATGAGAAATTGAACGGCGTTTTGCGCAAGTTTTTAGGCGATGCGTTCACGCTTGATGGGAA AGAAGGAGGATTGAATATGGAAAAATTGTGCGAAGCCATCAAAAAAGAAAAACCAATCATGAATATTTTGCTTATGGGGG CTACTGGGGTGGGTAAAAGCTCGCTCATTAACGCTCTATTTGGTAAAGAAATCACTAAAACAGGCGTAGGAAAGCCCATC ACTCAGCACCTTGAAAAATATGTTGATGAAGAAAAAGGCTTGATTTTATGGGACACTAAAGGCATTGAAGATAAAGATTA TCAAAGTACCATAGAAAGCATTAAAAAAGAAATGGAAGATTCTTTTAAAACACTTGATGAAAAAGAAGCCATTGATGTGG CGTATCTGTGCGTTAAAGAGACTTCTTCTAGGATTCAAGAGAGAGAGAGTTATTAA
Upstream 100 bases:
>100_bases CTACTCAAAACCTTAAAAAAATCCTATTTCATTATTTGAATACGCTATAATCGGTGCGACAACATTTTGCGGCTCAAATC ATTTTAAAAGGGGTTTTATA
Downstream 100 bases:
>100_bases GCTTTGCTAAAAATTTGAATATCCCAATTATTTTCGTTTCCACAAACACATAAGCCGAAGCCGGCGAGGCGTTTGTCCAA GAATCTAAAGCGATCATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MENNENHEKLNGVLRKFLGDAFTLDGKEGGLNMEKLCEAIKKEKPIMNILLMGATGVGKSSLINALFGKEITKTGVGKPI TQHLEKYVDEEKGLILWDTKGIEDKDYQSTIESIKKEMEDSFKTLDEKEAIDVAYLCVKETSSRIQERESY
Sequences:
>Translated_151_residues MENNENHEKLNGVLRKFLGDAFTLDGKEGGLNMEKLCEAIKKEKPIMNILLMGATGVGKSSLINALFGKEITKTGVGKPI TQHLEKYVDEEKGLILWDTKGIEDKDYQSTIESIKKEMEDSFKTLDEKEAIDVAYLCVKETSSRIQERESY >Mature_151_residues MENNENHEKLNGVLRKFLGDAFTLDGKEGGLNMEKLCEAIKKEKPIMNILLMGATGVGKSSLINALFGKEITKTGVGKPI TQHLEKYVDEEKGLILWDTKGIEDKDYQSTIESIKKEMEDSFKTLDEKEAIDVAYLCVKETSSRIQERESY
Specific function: Unknown
COG id: COG3596
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17035; Mature: 17035
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNENHEKLNGVLRKFLGDAFTLDGKEGGLNMEKLCEAIKKEKPIMNILLMGATGVGKS CCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHH SLINALFGKEITKTGVGKPITQHLEKYVDEEKGLILWDTKGIEDKDYQSTIESIKKEMED HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH SFKTLDEKEAIDVAYLCVKETSSRIQERESY HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MENNENHEKLNGVLRKFLGDAFTLDGKEGGLNMEKLCEAIKKEKPIMNILLMGATGVGKS CCCCCHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCHH SLINALFGKEITKTGVGKPITQHLEKYVDEEKGLILWDTKGIEDKDYQSTIESIKKEMED HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHH SFKTLDEKEAIDVAYLCVKETSSRIQERESY HHHHHCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA