Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563148

Identifier: 108563148

GI number: 108563148

Start: 761284

End: 762009

Strand: Direct

Name: 108563148

Synonym: HPAG1_0723

Alternate gene names: NA

Gene position: 761284-762009 (Clockwise)

Preceding gene: 108563147

Following gene: 108563149

Centisome position: 47.69

GC content: 36.64

Gene sequence:

>726_bases
ATGGCCAAACGCAGTATCGCTTATTTGGATAGCGTTTTTGACATTTCCTACACTTTTATAGATAACCATAGCCCTTTAAA
CGCCTTGTTTTTGCATGGTTGGGGGAGTTCTAAGGAAATCATGCAACAAGCGTTTCAAGGCTGTTTTTTAAATTATAATC
ATTTGTATGTGGATTTGCCCGGCTTCAATCAAAGCCCTAACGATGAAAAAGTCTTAGAGACTAAAGATTATGCTAATATC
ATCAATCTGTTCTTAAAAAGCGTGGATAAAAAAGCGCATGTCGTTTTTGGGCATAGCTTTGGAGGGAAAGTGGCGATTTT
GTGTGAAAACGAACGGATGGTTTTATTGAGCAGCGCCGGGATTTTAGAGCCAAAACCTTTAAAAGTGCGTTGTAAAATCC
TTTTAGCTAAAATCCTTAAAAAATTAGGCTTGAATTTAGGGTTTTTGAGGAGTAAGGACGCTATGGGGCTTAATCAAGTG
ATGTATGAAACCTTTAAAAAAGTGATTAGCGAAGACTTTAGCGATCATTTCAAACGATGCGAGAAGGAAGTTTTATTATT
TTGGGGTAAAGATGATAAAGCAACCCCCTTAAGCTCCGCTCAAAAAATGCAAACCTTATTGAAAAAGAGCGAATTATTCG
TTTTAGAAGGGGATCATTTCTTTTTTTTAAACCAAGCAAAAGAGATTGAAAAACTAGTGGAGAATTACCATCATGCAAAG
TCTTAG

Upstream 100 bases:

>100_bases
ATTTTAAAACAACGCTAGAAAATTTAGCGCAATCATTACCCAAAACCCCTAAAATCCAAATCAAAAACTCTTATTTGTTG
CAGATCCAAAAGAATAAGTA

Downstream 100 bases:

>100_bases
TTGGCTGAATTTAGCGTTCCGTTGGCTCTTTATAACAGGGCTTGGCTATTATATAATGACTTTATTGCAATGGTATCATT
ACAGCGTGTTTCGGATCTTA

Product: 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase; Carboxylesterase BioH; Hydrolase Alpha/Beta Fold Family

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAKRSIAYLDSVFDISYTFIDNHSPLNALFLHGWGSSKEIMQQAFQGCFLNYNHLYVDLPGFNQSPNDEKVLETKDYANI
INLFLKSVDKKAHVVFGHSFGGKVAILCENERMVLLSSAGILEPKPLKVRCKILLAKILKKLGLNLGFLRSKDAMGLNQV
MYETFKKVISEDFSDHFKRCEKEVLLFWGKDDKATPLSSAQKMQTLLKKSELFVLEGDHFFFLNQAKEIEKLVENYHHAK
S

Sequences:

>Translated_241_residues
MAKRSIAYLDSVFDISYTFIDNHSPLNALFLHGWGSSKEIMQQAFQGCFLNYNHLYVDLPGFNQSPNDEKVLETKDYANI
INLFLKSVDKKAHVVFGHSFGGKVAILCENERMVLLSSAGILEPKPLKVRCKILLAKILKKLGLNLGFLRSKDAMGLNQV
MYETFKKVISEDFSDHFKRCEKEVLLFWGKDDKATPLSSAQKMQTLLKKSELFVLEGDHFFFLNQAKEIEKLVENYHHAK
S
>Mature_240_residues
AKRSIAYLDSVFDISYTFIDNHSPLNALFLHGWGSSKEIMQQAFQGCFLNYNHLYVDLPGFNQSPNDEKVLETKDYANII
NLFLKSVDKKAHVVFGHSFGGKVAILCENERMVLLSSAGILEPKPLKVRCKILLAKILKKLGLNLGFLRSKDAMGLNQVM
YETFKKVISEDFSDHFKRCEKEVLLFWGKDDKATPLSSAQKMQTLLKKSELFVLEGDHFFFLNQAKEIEKLVENYHHAKS

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27558; Mature: 27427

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRSIAYLDSVFDISYTFIDNHSPLNALFLHGWGSSKEIMQQAFQGCFLNYNHLYVDLP
CCCCHHHHHHHHHHEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHEECCCEEEEECC
GFNQSPNDEKVLETKDYANIINLFLKSVDKKAHVVFGHSFGGKVAILCENERMVLLSSAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCEEEEECCC
ILEPKPLKVRCKILLAKILKKLGLNLGFLRSKDAMGLNQVMYETFKKVISEDFSDHFKRC
CCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKEVLLFWGKDDKATPLSSAQKMQTLLKKSELFVLEGDHFFFLNQAKEIEKLVENYHHAK
HHHEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEEEECHHHHHHHHHHHHHCCC
S
C
>Mature Secondary Structure 
AKRSIAYLDSVFDISYTFIDNHSPLNALFLHGWGSSKEIMQQAFQGCFLNYNHLYVDLP
CCCHHHHHHHHHHEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHEECCCEEEEECC
GFNQSPNDEKVLETKDYANIINLFLKSVDKKAHVVFGHSFGGKVAILCENERMVLLSSAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCCCEEEEECCC
ILEPKPLKVRCKILLAKILKKLGLNLGFLRSKDAMGLNQVMYETFKKVISEDFSDHFKRC
CCCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EKEVLLFWGKDDKATPLSSAQKMQTLLKKSELFVLEGDHFFFLNQAKEIEKLVENYHHAK
HHHEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCEEEEECHHHHHHHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA