| Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
|---|---|
| Accession | NC_008086 |
| Length | 1,596,366 |
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The map label for this gene is yjeE [C]
Identifier: 108563126
GI number: 108563126
Start: 737421
End: 737822
Strand: Reverse
Name: yjeE [C]
Synonym: HPAG1_0701
Alternate gene names: 108563126
Gene position: 737822-737421 (Counterclockwise)
Preceding gene: 108563127
Following gene: 108563125
Centisome position: 46.22
GC content: 39.05
Gene sequence:
>402_bases ATGAGAGCGAATTTAGACGAATTAGACAAAGTGGCGGCTGCAATTTTAAAAGATGATTTTAAGGGGGTGGTGCTTTTAAA AGGCGTTGTGGGGAGTGGTAAAACGACTTTAGTTCAAGCATGCTTGAAACACTTGGGTTTAGACATTCAAGCGACTTCGC CCACCTTTAGCTTGATGCATGCTTATAGCGAGAGCGTGTTCCATTATGATTTTTACATGCGCGATTTAGAGGCTTGCTTG GAGCTTGGCATGTTGGAGTGCTTGTTAGAAAAGGGGATCCATTTTGTGGAATGGGGCGATGAAAAATTAGAAAAAATTTT AAAAAAATACGATTTAGCTATTAAGGTTGTGGAAATCAAAACCGAATCAACTAGCCGTTTTTATACAATAAAGATCGCTT AA
Upstream 100 bases:
>100_bases CCAAAGAAGCCCCTACAGCCTTGCAAGAATTTATGGCTAATCATTCCAATCTCATTGAAGAGATTAAGAGCGAGTTTGAA ATCAAAAGCGTGGAATTGTT
Downstream 100 bases:
>100_bases AGGGCCGCTTGAATGGATATTTTAAAAGCAGAGCATTTGAACAAACAGATTAAAAAAACTAAAATCGTTTCAGATGTTTC TTTAGAAGTGAAAAGTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MRANLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMHAYSESVFHYDFYMRDLEACL ELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIKTESTSRFYTIKIA
Sequences:
>Translated_133_residues MRANLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMHAYSESVFHYDFYMRDLEACL ELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIKTESTSRFYTIKIA >Mature_133_residues MRANLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMHAYSESVFHYDFYMRDLEACL ELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIKTESTSRFYTIKIA
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15004; Mature: 15004
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRANLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMH CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCHHHHHH AYSESVFHYDFYMRDLEACLELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHEEEEEEEE TESTSRFYTIKIA ECCCCEEEEEEEC >Mature Secondary Structure MRANLDELDKVAAAILKDDFKGVVLLKGVVGSGKTTLVQACLKHLGLDIQATSPTFSLMH CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEECCCHHHHHH AYSESVFHYDFYMRDLEACLELGMLECLLEKGIHFVEWGDEKLEKILKKYDLAIKVVEIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHEEEEEEEE TESTSRFYTIKIA ECCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA