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The map label for this gene is atoE [H]

Identifier: 108563103

GI number: 108563103

Start: 710245

End: 711609

Strand: Direct

Name: atoE [H]

Synonym: HPAG1_0678

Alternate gene names: 108563103

Gene position: 710245-711609 (Clockwise)

Preceding gene: 108563102

Following gene: 108563104

Centisome position: 44.49

GC content: 40.81

Gene sequence:

>1365_bases
ATGTTTTTATTAAGGCATTTGACTTCAGCGTGCGTGTTTTTAGCGTCTAAATGTTTGCCGGACTCCTTTGTCTTGGTCAC
TCTTTTATCGTTTATCGTGTTTGTTCTTGTTTATTGCTTGACAGGGCAAGACGCTTTTTCTGTCATTTCTAGTTGGGGGA
ATGGCGCTTGGACGCTTTTAGGTTTTTCTATGCAAATGGCTCTTATTTTGGTGTTGGGTCAAGCTCTGGCTAGCGCTAAA
TTAGTCCAAAAACTTTTAAAATATCTAGCGTCTTTACCTAAAGGGTATTACACGGCTTTATGGTTGGTTACTTTTTTATC
ATTAATTGCTAATTGGATCAACTGGGGTTTTGGCTTAGTGATTAGCGCGATTTTTGCAAAAGAGATCGCTAAAAATGTTA
AAGGGGTGGATTACAGACTGCTTATTGCTAGCGCTTATTCGGGTTTTGTCATCTGGCATGGGGGCTTATCAGGCTCTATC
CCTTTAAGCGTTGCCACCCAAAATGAAGATCTATCCAAAATAAGTGCTGGGGTGATTGAAAAAGCCATTCCTATCAGTCA
GACGATTTTTTCTGCTTATAATTTAATCATCATAGGGATCATTCTTGTAGGGTTACCCTTTTTAATGGCAATGATCCACC
CTAAAAAAGAAGAAATCGTTGAGATTGATTCAAAGCTTTTAAAAGACGAATACAAGGAAACAGAACTCATTGATCACCAA
CAAGACAAAACGATCGCGCATTTTCTGGAAAACAGCGCTTTGCTTTCTTATCTTTTGGTTTTTTTGGGTTTTGGGTATCT
GGGTATTTATTTTTTTAAAGGAGGAGGGATTAGTTTAAACATTGTCAATACGATTTTCCTTTTTTTAGGGATTTTGCTCC
ATAAAACCCCTTTAGCTTATGTGAAAGCGATCAATTATTCCGCTAGGAGCGTGGCTGGGATTTTATTGCAATTCCCTTTT
TATGCCGGGATCATGGGGATGATGGCAAGCCATAGCGTGGGGGGTCATTCTTTAGCACAAATGCTTTCTTTAGCCTTCAC
GCACATCGCTAATGAAAAAACTTTCGCGCTCATGACTTTTTTGAGCGCGGGGATTGTCAATATTTTTATTCCGTCTGGTG
GAGGGCAATGGGCGATTCAAGCTCCTATCATGCTTCCGGCTGGGCAGAGCTTAGGCGTGGATCCGGGCGTGGTTTCTATG
GCTATCGCTTGGGGAGACGCTTGGACGAATATGATACAGCCTTTTTGGGCTTTGCCTGCTTTAGCCATTGCGGGTTTGGG
TGCTAAAGATATTATGGGTTATTGCGTTTTGACTTTAATTTTTGTAGGTCTAGTCGTGTGTGGGGTGTTTTATTTTTTAG
TGTGA

Upstream 100 bases:

>100_bases
GAAATTAGTGGAATTGCAAGAGGGGGTCAGCCTTGATCAAGTGAGAGAAAAAACAGAAGCCGAATTTGAAGTGCACCTAT
AGCTTATAAAAGGGGTGTTT

Downstream 100 bases:

>100_bases
GTTTTTTATGCCTAAAACCACGCTCTTTTCAATGGGGTAAAGTTTTCTCTTTTTACCCCTTAAACGCTCTTGTAATTAAG
CCTTATTTCGTTACAATAAC

Product: short-chain fatty acids transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 454

Protein sequence:

>454_residues
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFVLVYCLTGQDAFSVISSWGNGAWTLLGFSMQMALILVLGQALASAK
LVQKLLKYLASLPKGYYTALWLVTFLSLIANWINWGFGLVISAIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSI
PLSVATQNEDLSKISAGVIEKAIPISQTIFSAYNLIIIGIILVGLPFLMAMIHPKKEEIVEIDSKLLKDEYKETELIDHQ
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAYVKAINYSARSVAGILLQFPF
YAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTFLSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSM
AIAWGDAWTNMIQPFWALPALAIAGLGAKDIMGYCVLTLIFVGLVVCGVFYFLV

Sequences:

>Translated_454_residues
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFVLVYCLTGQDAFSVISSWGNGAWTLLGFSMQMALILVLGQALASAK
LVQKLLKYLASLPKGYYTALWLVTFLSLIANWINWGFGLVISAIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSI
PLSVATQNEDLSKISAGVIEKAIPISQTIFSAYNLIIIGIILVGLPFLMAMIHPKKEEIVEIDSKLLKDEYKETELIDHQ
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAYVKAINYSARSVAGILLQFPF
YAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTFLSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSM
AIAWGDAWTNMIQPFWALPALAIAGLGAKDIMGYCVLTLIFVGLVVCGVFYFLV
>Mature_454_residues
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFVLVYCLTGQDAFSVISSWGNGAWTLLGFSMQMALILVLGQALASAK
LVQKLLKYLASLPKGYYTALWLVTFLSLIANWINWGFGLVISAIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSI
PLSVATQNEDLSKISAGVIEKAIPISQTIFSAYNLIIIGIILVGLPFLMAMIHPKKEEIVEIDSKLLKDEYKETELIDHQ
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAYVKAINYSARSVAGILLQFPF
YAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTFLSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSM
AIAWGDAWTNMIQPFWALPALAIAGLGAKDIMGYCVLTLIFVGLVVCGVFYFLV

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=431, Percent_Identity=47.5638051044084, Blast_Score=391, Evalue=1e-110,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 49226; Mature: 49226

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFVLVYCLTGQDAFSVISSWGNGAWTLL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEHHH
GFSMQMALILVLGQALASAKLVQKLLKYLASLPKGYYTALWLVTFLSLIANWINWGFGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSIPLSVATQNEDLSKISAGVIE
HHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
KAIPISQTIFSAYNLIIIGIILVGLPFLMAMIHPKKEEIVEIDSKLLKDEYKETELIDHQ
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHCCHHHH
VKAINYSARSVAGILLQFPFYAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSMAIAWGDAWTNMIQPFWALPA
HHCCCEEEEEECCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAIAGLGAKDIMGYCVLTLIFVGLVVCGVFYFLV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MFLLRHLTSACVFLASKCLPDSFVLVTLLSFIVFVLVYCLTGQDAFSVISSWGNGAWTLL
CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEHHH
GFSMQMALILVLGQALASAKLVQKLLKYLASLPKGYYTALWLVTFLSLIANWINWGFGLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAIFAKEIAKNVKGVDYRLLIASAYSGFVIWHGGLSGSIPLSVATQNEDLSKISAGVIE
HHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHH
KAIPISQTIFSAYNLIIIGIILVGLPFLMAMIHPKKEEIVEIDSKLLKDEYKETELIDHQ
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCC
QDKTIAHFLENSALLSYLLVFLGFGYLGIYFFKGGGISLNIVNTIFLFLGILLHKTPLAY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHCCHHHH
VKAINYSARSVAGILLQFPFYAGIMGMMASHSVGGHSLAQMLSLAFTHIANEKTFALMTF
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
LSAGIVNIFIPSGGGQWAIQAPIMLPAGQSLGVDPGVVSMAIAWGDAWTNMIQPFWALPA
HHCCCEEEEEECCCCCEEEECCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LAIAGLGAKDIMGYCVLTLIFVGLVVCGVFYFLV
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]