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The map label for this gene is 108563027

Identifier: 108563027

GI number: 108563027

Start: 628657

End: 629463

Strand: Direct

Name: 108563027

Synonym: HPAG1_0602

Alternate gene names: NA

Gene position: 628657-629463 (Clockwise)

Preceding gene: 108563026

Following gene: 108563028

Centisome position: 39.38

GC content: 37.55

Gene sequence:

>807_bases
ATGAAGTTACCCCCCCCCCCCCCCAATCCCACACAAGATGCACAACAAGATTGTATTATTGAAACGCAACAAGACCCTAA
AGAACTATCTGAGCCTTGCAAAATAGCACCCCAAAAAACCTCTTTTAACCAAGTGGTTTTTAGAAAAATTAAAAGAAAAC
TCAACCGCTTTATTGGAAATATTTTAGCTCGGACAGAAGTGTATAAAAATCTCACAGGAAAATACGATGAACTCACAGGA
AAATACGATGAACTCACAGGAAAATACGATGAACTCACAGGAAAATACGATGAACTCACAGGAAAATACGATGAACTCAC
AGGAAAATACGATGAACTCACAGGAAAATACGAATCCTTATTGGCAAAAGAGGTAAACATTAAAGAGACTTTTTGGGAAT
CTCGCACTGATAATGAAAAAGAAGCGCTATTTTTAGAGCATTTTTATCTCACCAGCGTGTATGTGGCCACTACAGCAGGC
TACTACCTCACGCCTAAGGGCGCTAAAACCTTTATAGAAGCCACGGAGCGTTTTAAAATCATAGAGCCGGTGGATATGTT
TATGAATAACCCCACTTACCATGATGTGGCTAATTTTACTTATTTGCCTTGCCCTGTTTCTTTAAACAAGCATGCTTTCA
ATAGCACCATTCAAAATGCAAAAAAACCTGACATTTCATTAAAGCCCCCTAGAAAATCCTATTTTGATAATCTTTTTTAT
CATAAATTTAACGCCAGAAAGTGCTTAAAAGCCTTTCACAAATACAGCAAACAATACGCTCCTTTAAAAACCCCTAAAGA
GGTTTAA

Upstream 100 bases:

>100_bases
CATTATTGGGGAGGCCATAAAACCAATTTGCACTCTCTCCCTATCTATACAGAGGCTGAATGGGCTGAAGCGTCTATTGA
AGAAACGCCTATTGAAAATT

Downstream 100 bases:

>100_bases
AAAGAGCGGGCTTTATGTTAGAATAAGTCTTTTTATCAACTCAAGGAGATTGCAATGAATTTAGACCAATTAGAAGTGAG
CCATGACGCTGATTCTTTGT

Product: putative lipopolysaccharide biosynthesis protein

Products: NA

Alternate protein names: Family

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKLPPPPPNPTQDAQQDCIIETQQDPKELSEPCKIAPQKTSFNQVVFRKIKRKLNRFIGNILARTEVYKNLTGKYDELTG
KYDELTGKYDELTGKYDELTGKYDELTGKYDELTGKYESLLAKEVNIKETFWESRTDNEKEALFLEHFYLTSVYVATTAG
YYLTPKGAKTFIEATERFKIIEPVDMFMNNPTYHDVANFTYLPCPVSLNKHAFNSTIQNAKKPDISLKPPRKSYFDNLFY
HKFNARKCLKAFHKYSKQYAPLKTPKEV

Sequences:

>Translated_268_residues
MKLPPPPPNPTQDAQQDCIIETQQDPKELSEPCKIAPQKTSFNQVVFRKIKRKLNRFIGNILARTEVYKNLTGKYDELTG
KYDELTGKYDELTGKYDELTGKYDELTGKYDELTGKYESLLAKEVNIKETFWESRTDNEKEALFLEHFYLTSVYVATTAG
YYLTPKGAKTFIEATERFKIIEPVDMFMNNPTYHDVANFTYLPCPVSLNKHAFNSTIQNAKKPDISLKPPRKSYFDNLFY
HKFNARKCLKAFHKYSKQYAPLKTPKEV
>Mature_268_residues
MKLPPPPPNPTQDAQQDCIIETQQDPKELSEPCKIAPQKTSFNQVVFRKIKRKLNRFIGNILARTEVYKNLTGKYDELTG
KYDELTGKYDELTGKYDELTGKYDELTGKYDELTGKYESLLAKEVNIKETFWESRTDNEKEALFLEHFYLTSVYVATTAG
YYLTPKGAKTFIEATERFKIIEPVDMFMNNPTYHDVANFTYLPCPVSLNKHAFNSTIQNAKKPDISLKPPRKSYFDNLFY
HKFNARKCLKAFHKYSKQYAPLKTPKEV

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31138; Mature: 31138

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLPPPPPNPTQDAQQDCIIETQQDPKELSEPCKIAPQKTSFNQVVFRKIKRKLNRFIGN
CCCCCCCCCCCCCHHHHCEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ILARTEVYKNLTGKYDELTGKYDELTGKYDELTGKYDELTGKYDELTGKYDELTGKYESL
HHHHHHHHHHHCCCHHHHCCCHHHHCCCHHHHCCCHHHHCCCHHHHCCCHHHHHHHHHHH
LAKEVNIKETFWESRTDNEKEALFLEHFYLTSVYVATTAGYYLTPKGAKTFIEATERFKI
HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCC
IEPVDMFMNNPTYHDVANFTYLPCPVSLNKHAFNSTIQNAKKPDISLKPPRKSYFDNLFY
CCHHHHHHCCCCHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HKFNARKCLKAFHKYSKQYAPLKTPKEV
HHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKLPPPPPNPTQDAQQDCIIETQQDPKELSEPCKIAPQKTSFNQVVFRKIKRKLNRFIGN
CCCCCCCCCCCCCHHHHCEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
ILARTEVYKNLTGKYDELTGKYDELTGKYDELTGKYDELTGKYDELTGKYDELTGKYESL
HHHHHHHHHHHCCCHHHHCCCHHHHCCCHHHHCCCHHHHCCCHHHHCCCHHHHHHHHHHH
LAKEVNIKETFWESRTDNEKEALFLEHFYLTSVYVATTAGYYLTPKGAKTFIEATERFKI
HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHCC
IEPVDMFMNNPTYHDVANFTYLPCPVSLNKHAFNSTIQNAKKPDISLKPPRKSYFDNLFY
CCHHHHHHCCCCHHHHCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HKFNARKCLKAFHKYSKQYAPLKTPKEV
HHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA