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The map label for this gene is 108563017

Identifier: 108563017

GI number: 108563017

Start: 620046

End: 620285

Strand: Reverse

Name: 108563017

Synonym: HPAG1_0592

Alternate gene names: NA

Gene position: 620285-620046 (Counterclockwise)

Preceding gene: 108563018

Following gene: 108563016

Centisome position: 38.86

GC content: 30.83

Gene sequence:

>240_bases
ATGGGAGCAATTCTATCTATCCTAAAACTTGAAATCAAATCTTATCTCACCAATACAAGCGCGCTATTTTGGACTTTTAT
TTATCCTATTTTAATGCTCCTATTACTGATTTTTGTTTTTTCAAAAAATACCACTGAAATTTTTTACTTTAATAACATTA
TAGGTCTAATGGGACTTCTTATTATTTCTAGCGCGATCTTTGGTCTCACACAAGCTATAACAAGCTTGAGAATCGCATAA

Upstream 100 bases:

>100_bases
ACAAACCTTTAAATTCTATATTAAAATCTGTAGCTATAACTTTTGACCTTAAAGAAAAACTGAGTGCAAAAGACTTATTA
GCATTACTAAAGGATATTTA

Downstream 100 bases:

>100_bases
TATATTCTTGTTCTACATGCTATCACCAGCAACTTTCAAACAAATAACTCTAGCATTAATCGCTTCAAGACTAATCGTTG
TAATCCTATATGCTTTTATC

Product: ABC transporter, permease

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MGAILSILKLEIKSYLTNTSALFWTFIYPILMLLLLIFVFSKNTTEIFYFNNIIGLMGLLIISSAIFGLTQAITSLRIA

Sequences:

>Translated_79_residues
MGAILSILKLEIKSYLTNTSALFWTFIYPILMLLLLIFVFSKNTTEIFYFNNIIGLMGLLIISSAIFGLTQAITSLRIA
>Mature_78_residues
GAILSILKLEIKSYLTNTSALFWTFIYPILMLLLLIFVFSKNTTEIFYFNNIIGLMGLLIISSAIFGLTQAITSLRIA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8880; Mature: 8749

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAILSILKLEIKSYLTNTSALFWTFIYPILMLLLLIFVFSKNTTEIFYFNNIIGLMGLL
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
IISSAIFGLTQAITSLRIA
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GAILSILKLEIKSYLTNTSALFWTFIYPILMLLLLIFVFSKNTTEIFYFNNIIGLMGLL
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHH
IISSAIFGLTQAITSLRIA
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA