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The map label for this gene is 108562972

Identifier: 108562972

GI number: 108562972

Start: 565907

End: 566674

Strand: Reverse

Name: 108562972

Synonym: HPAG1_0547

Alternate gene names: NA

Gene position: 566674-565907 (Counterclockwise)

Preceding gene: 108562973

Following gene: 108562970

Centisome position: 35.5

GC content: 38.67

Gene sequence:

>768_bases
ATGCCTTTAGAATTATTTGAAAAAGTTTGCAAAGAAGTGGCCCCCTTAACCCCAATTATCACCTTGCATGTCTTAGGCGA
TCCTTGCAGGCTCAAAAATTTAAACCGCTATTTAAGCACCGCTAAACGCTTTTCTTTGAAAGTGGATTTGGTTACTAGCG
GGGTGTATTTGCACGATTTTGAAACACTCCTACAAGATGCAATCTATCAAATCTCTATTTCTTTAGACGCAGGGCTAGAC
CATCATAACAAACTCAACCAGCACCGCTATATCCAAAAAATTTTAGAATTTTGCCGCTACAAATGTGAAAAAAATAGCGA
AGTGTTTTTGAATTTACGCATTCAAGACAGCACCCTTGACAAACACCAGAATTTGATCAAGCCTTTTTTAGAAAGCTTTG
AATGCGTTTCTTTAGGGGGTTTAAAATCGCAAGGCCGCACTCGTTTGTTTAAAAAAAGTTTTTTGAATATCCAAAAGACC
TTTAAATGGCCGAGCTTGAACGCTCAAAATCCTTTAAACCAGAAATCAAAAACCCCCTATTGCTACGGACTTATTAAGCA
AATCGCTATTTTATCTAATGGCGTTGTCGTGCCGTGTTGCATGGACACGCAAGCTCATATCAGCCTTGGCGATTTAAACC
ATACGCCCCTAAAAGATGTTTTAAAGAGCCAAAAAGCTATGGCTATCAAAACCCATTTTTTAAAGGGCGAAGCGTTAGAA
CTCTTATGCAAAAACTGCTCCTACCCTTTGATCCGCTATAAAAAATGA

Upstream 100 bases:

>100_bases
ACCCAACAAGAAACTTTTTAAAAAAATCTATATAGAATTAAGCGATATTTGTGGGTTGCAATGCAGTTTTTGCCCTAACC
CCAAAAATATCAGAGGCGTG

Downstream 100 bases:

>100_bases
AACCACTCCCTTAGGGATTAGCCCTGCTTATTCCTTGAAAAGGCTGTTATTTTTAGCGCGTTTTGTAATCCTTTTAATAG
CTCATTAGTCATTGGTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Radical SAM Domain Protein; Radical Sam Domain Protein; Radical SAM Family Protein; Pyruvate Formate-Lyase Activating; Molybdenum Cofactor Biosynthesis Protein; Fe-S Oxidoreductase; Radical SAM

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MPLELFEKVCKEVAPLTPIITLHVLGDPCRLKNLNRYLSTAKRFSLKVDLVTSGVYLHDFETLLQDAIYQISISLDAGLD
HHNKLNQHRYIQKILEFCRYKCEKNSEVFLNLRIQDSTLDKHQNLIKPFLESFECVSLGGLKSQGRTRLFKKSFLNIQKT
FKWPSLNAQNPLNQKSKTPYCYGLIKQIAILSNGVVVPCCMDTQAHISLGDLNHTPLKDVLKSQKAMAIKTHFLKGEALE
LLCKNCSYPLIRYKK

Sequences:

>Translated_255_residues
MPLELFEKVCKEVAPLTPIITLHVLGDPCRLKNLNRYLSTAKRFSLKVDLVTSGVYLHDFETLLQDAIYQISISLDAGLD
HHNKLNQHRYIQKILEFCRYKCEKNSEVFLNLRIQDSTLDKHQNLIKPFLESFECVSLGGLKSQGRTRLFKKSFLNIQKT
FKWPSLNAQNPLNQKSKTPYCYGLIKQIAILSNGVVVPCCMDTQAHISLGDLNHTPLKDVLKSQKAMAIKTHFLKGEALE
LLCKNCSYPLIRYKK
>Mature_254_residues
PLELFEKVCKEVAPLTPIITLHVLGDPCRLKNLNRYLSTAKRFSLKVDLVTSGVYLHDFETLLQDAIYQISISLDAGLDH
HNKLNQHRYIQKILEFCRYKCEKNSEVFLNLRIQDSTLDKHQNLIKPFLESFECVSLGGLKSQGRTRLFKKSFLNIQKTF
KWPSLNAQNPLNQKSKTPYCYGLIKQIAILSNGVVVPCCMDTQAHISLGDLNHTPLKDVLKSQKAMAIKTHFLKGEALEL
LCKNCSYPLIRYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29224; Mature: 29092

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS00045 HISTONE_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLELFEKVCKEVAPLTPIITLHVLGDPCRLKNLNRYLSTAKRFSLKVDLVTSGVYLHDF
CCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHH
ETLLQDAIYQISISLDAGLDHHNKLNQHRYIQKILEFCRYKCEKNSEVFLNLRIQDSTLD
HHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHH
KHQNLIKPFLESFECVSLGGLKSQGRTRLFKKSFLNIQKTFKWPSLNAQNPLNQKSKTPY
HHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
CYGLIKQIAILSNGVVVPCCMDTQAHISLGDLNHTPLKDVLKSQKAMAIKTHFLKGEALE
HHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHH
LLCKNCSYPLIRYKK
HHHHCCCCCCEEECC
>Mature Secondary Structure 
PLELFEKVCKEVAPLTPIITLHVLGDPCRLKNLNRYLSTAKRFSLKVDLVTSGVYLHDF
CHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHH
ETLLQDAIYQISISLDAGLDHHNKLNQHRYIQKILEFCRYKCEKNSEVFLNLRIQDSTLD
HHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCHHH
KHQNLIKPFLESFECVSLGGLKSQGRTRLFKKSFLNIQKTFKWPSLNAQNPLNQKSKTPY
HHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
CYGLIKQIAILSNGVVVPCCMDTQAHISLGDLNHTPLKDVLKSQKAMAIKTHFLKGEALE
HHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCHHHHH
LLCKNCSYPLIRYKK
HHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA