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The map label for this gene is ykgB [C]

Identifier: 108562969

GI number: 108562969

Start: 562810

End: 563457

Strand: Reverse

Name: ykgB [C]

Synonym: HPAG1_0544

Alternate gene names: 108562969

Gene position: 563457-562810 (Counterclockwise)

Preceding gene: 108562970

Following gene: 108562967

Centisome position: 35.3

GC content: 41.98

Gene sequence:

>648_bases
ATGCAAGCGTTAAAATCATTGCTTGAAGTGATTACAAAACTCCAGAATCTAGGCGGCTATTTGATGCATATAGCTATTTT
TATCATTTTTATTTGGATTGGAGGGCTTAAGTTTGTGCCGTATGAAGCCGAAGGGATCGCTCCTTTTGTGGCTAACTCCC
CTTTCTTTTCTTTCATGTATAAATTTGAAAAGCCCGCATACAAACAACACAAAATGTCTGAATCCCAATCCATGCAAGAA
GAAATGCAAGATGACCCTAAAATCGTTGAAAACAAAGAATGGCATAAAGAAAACCGCACTTATTTGGTGGCTGAAGCCTT
AGGGATCACGATTATGATCCTAGGTATTTTGGTGCTTTTAGGGCTTTGGATGCCTTTAATGGGCGTGATTGGTGGCTTGC
TTGTCGCTGGAATGACGATCACTACCCTATCTTTTTTATTCACAACGCCAGAAGTGTTTGTCAATCAGCATTTCCCATGG
CTTTCTGGGGCTGGGAGGTTAGTGGTTAAAGACTTGGCGTTATTTGCTGGAGGCTTGTTTGTAGCCGGGTTTGATGCGAA
ACGCTATTTAGAGGGGAAAGGGTTTTGCTTGATGGATCGCTCATCGGTAGGGATTAAAACTAAATGCTCTAGCGGGTGTT
GCTCTTAA

Upstream 100 bases:

>100_bases
TTTCTTGTAATAGCAATGATTTTGTCGTAATTAAACATAATGCGCTATCATTTCTAGGCTGTTTTTAGCAATACAAAAAA
TATCCTAAAGGAATAAAACC

Downstream 100 bases:

>100_bases
AGAACGAACGCCTTAAAGTAGGCTTAAAGCCTACTAGAAGAATCATTAACAGAAAGATCTTGGTTAGCGCCTTTTTTATA
AATGATTGTTTTTAAAATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQALKSLLEVITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYKFEKPAYKQHKMSESQSMQE
EMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLLGLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPW
LSGAGRLVVKDLALFAGGLFVAGFDAKRYLEGKGFCLMDRSSVGIKTKCSSGCCS

Sequences:

>Translated_215_residues
MQALKSLLEVITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYKFEKPAYKQHKMSESQSMQE
EMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLLGLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPW
LSGAGRLVVKDLALFAGGLFVAGFDAKRYLEGKGFCLMDRSSVGIKTKCSSGCCS
>Mature_215_residues
MQALKSLLEVITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMYKFEKPAYKQHKMSESQSMQE
EMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLLGLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPW
LSGAGRLVVKDLALFAGGLFVAGFDAKRYLEGKGFCLMDRSSVGIKTKCSSGCCS

Specific function: Unknown

COG id: COG3059

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0219 [H]

Homologues:

Organism=Escherichia coli, GI87081715, Length=211, Percent_Identity=36.4928909952607, Blast_Score=130, Evalue=5e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007339 [H]

Pfam domain/function: PF04224 DUF417 [H]

EC number: NA

Molecular weight: Translated: 23923; Mature: 23923

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQALKSLLEVITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMY
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCCHHHHHHH
KFEKPAYKQHKMSESQSMQEEMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLL
HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHH
GLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPWLSGAGRLVVKDLALFAGGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH
VAGFDAKRYLEGKGFCLMDRSSVGIKTKCSSGCCS
EECCCHHHHHCCCCEEEECCCCCCCEECCCCCCCC
>Mature Secondary Structure
MQALKSLLEVITKLQNLGGYLMHIAIFIIFIWIGGLKFVPYEAEGIAPFVANSPFFSFMY
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHCCCHHHHHHH
KFEKPAYKQHKMSESQSMQEEMQDDPKIVENKEWHKENRTYLVAEALGITIMILGILVLL
HHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEHHHHHHHHHHHHHHHHHH
GLWMPLMGVIGGLLVAGMTITTLSFLFTTPEVFVNQHFPWLSGAGRLVVKDLALFAGGLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHH
VAGFDAKRYLEGKGFCLMDRSSVGIKTKCSSGCCS
EECCCHHHHHCCCCEEEECCCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8219279 [H]