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The map label for this gene is rsmI [H]

Identifier: 108562955

GI number: 108562955

Start: 552747

End: 553610

Strand: Direct

Name: rsmI [H]

Synonym: HPAG1_0530

Alternate gene names: 108562955

Gene position: 552747-553610 (Clockwise)

Preceding gene: 108562954

Following gene: 108562956

Centisome position: 34.63

GC content: 41.44

Gene sequence:

>864_bases
GTGCTGTATTTTTTGCCCACTCCTATAGGTAATCTCGCTGACATTACGCTACGCACCTTAGAAGTTTTAGAGCGTTGCGA
GGTTTTTTTGTGCGAGGATACAAGGGTGAGTAAGAGGCTGTTGCACTTGCTTGCAAAAAACCCTATTATTAGCCATTCTT
TCCCTAATATTGCGACTAAAAAAAGGGAGTTTATCGCATTCCATTCGCACAATGACCAGGAATTTTTAAACCAAATAGAG
CCTTCTTTTTTTGACAAAGAAATCGCTGTGATGAGCGATGCGGGCATGCCAAGTTTGAGCGATCCAGGCATGAGTTTAGT
CGCTCACGCTTTAAAACATAACATTCAATACGATGTTTTGCCCGGGGCTAACGCGCTCACTACGGCGTTTTGCGCGAGCG
GGTTTTTAGAAGGGCGGTTTTTTTACGCCGGCTTTTTACCTCATAAGAGTAAGGAAAGGCGCTTAAAAATCGCTAAAATT
TTAAACGCTTTAGCGTATTTAGAAGAAAAAACCCCGGTGGTTTTTTATGAAAGCCCGCACCGATTGCTAGAAACTTTAAA
GGATTTAAACGATCTGGCTAAAGGCATGCACTTGTTTGCGGCTAAAGAGCTTACCAAACTCCACCAGCAATATTATTTAG
GAGAAGTTTCTCAAATCATAGAGCGGTTGCAACAAAGCACTATCCAAGGGGAGTGGGTTTTAGTGCTTTTGAATGAAAAG
AAAATAGAGCCTTGCATGGGGCTATCGGCGTTATTGGAGTTGGATTTACCTCCTAAAATTAAGGCTAAAATTGAAGCCGC
TATGACACAAAAAAACGCTAAAGAGCTTTATTTCCAGCGTTTGTCAGAAGAAAAAGATCAATAA

Upstream 100 bases:

>100_bases
CTATACCGGTAGCGATAAAATCGCTGACACTGCAGGGAGAGTAGAGAAATTCAAGCAACGCTACAACTTGAAGTAACTCT
TTTAAAAAGCGTGGCTTTTT

Downstream 100 bases:

>100_bases
AAGAGGTTTAGCATGCAAGCAGTAATTTATGGCAAGCAGGTGATTACGCACCTTCTAAACTCTCACAAAGAAAAATTGCA
AGAAATCTATCTTTCTAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MLYFLPTPIGNLADITLRTLEVLERCEVFLCEDTRVSKRLLHLLAKNPIISHSFPNIATKKREFIAFHSHNDQEFLNQIE
PSFFDKEIAVMSDAGMPSLSDPGMSLVAHALKHNIQYDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKI
LNALAYLEEKTPVVFYESPHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK
KIEPCMGLSALLELDLPPKIKAKIEAAMTQKNAKELYFQRLSEEKDQ

Sequences:

>Translated_287_residues
MLYFLPTPIGNLADITLRTLEVLERCEVFLCEDTRVSKRLLHLLAKNPIISHSFPNIATKKREFIAFHSHNDQEFLNQIE
PSFFDKEIAVMSDAGMPSLSDPGMSLVAHALKHNIQYDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKI
LNALAYLEEKTPVVFYESPHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK
KIEPCMGLSALLELDLPPKIKAKIEAAMTQKNAKELYFQRLSEEKDQ
>Mature_287_residues
MLYFLPTPIGNLADITLRTLEVLERCEVFLCEDTRVSKRLLHLLAKNPIISHSFPNIATKKREFIAFHSHNDQEFLNQIE
PSFFDKEIAVMSDAGMPSLSDPGMSLVAHALKHNIQYDVLPGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKI
LNALAYLEEKTPVVFYESPHRLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK
KIEPCMGLSALLELDLPPKIKAKIEAAMTQKNAKELYFQRLSEEKDQ

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=266, Percent_Identity=36.4661654135338, Blast_Score=134, Evalue=5e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32699; Mature: 32699

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYFLPTPIGNLADITLRTLEVLERCEVFLCEDTRVSKRLLHLLAKNPIISHSFPNIATK
CEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHC
KREFIAFHSHNDQEFLNQIEPSFFDKEIAVMSDAGMPSLSDPGMSLVAHALKHNIQYDVL
HHHEEEEECCCHHHHHHHCCHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHCCCEEEC
PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH
CCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHH
RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
KIEPCMGLSALLELDLPPKIKAKIEAAMTQKNAKELYFQRLSEEKDQ
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLYFLPTPIGNLADITLRTLEVLERCEVFLCEDTRVSKRLLHLLAKNPIISHSFPNIATK
CEEECCCCCCCHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCHHHC
KREFIAFHSHNDQEFLNQIEPSFFDKEIAVMSDAGMPSLSDPGMSLVAHALKHNIQYDVL
HHHEEEEECCCHHHHHHHCCHHHHCCHHHEEECCCCCCCCCCHHHHHHHHHHHCCCEEEC
PGANALTTAFCASGFLEGRFFYAGFLPHKSKERRLKIAKILNALAYLEEKTPVVFYESPH
CCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHH
RLLETLKDLNDLAKGMHLFAAKELTKLHQQYYLGEVSQIIERLQQSTIQGEWVLVLLNEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC
KIEPCMGLSALLELDLPPKIKAKIEAAMTQKNAKELYFQRLSEEKDQ
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]