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The map label for this gene is 108562938

Identifier: 108562938

GI number: 108562938

Start: 536027

End: 536947

Strand: Direct

Name: 108562938

Synonym: HPAG1_0513

Alternate gene names: NA

Gene position: 536027-536947 (Clockwise)

Preceding gene: 108562937

Following gene: 108562949

Centisome position: 33.58

GC content: 34.31

Gene sequence:

>921_bases
TTGAAAAGCATCTTCAAAAAACTAGGTTCTGTCGCTCTTTATTCTTTAGTTGTTTATGGGGGCTTAAACGCTATCAATAC
AGCATTATTGCCGAGTGAATACAAAAAATTAGTGGCTTTAGGCTTTAAAAAAATCAAAACATTCCATCAAAGACATGACG
ACGAAGAAATTACAAAAGAGGAAAAAGAATTCGCCACTAACGCTTTGAGAGAAAAATTACGAAATGATAGGGCGAGAGTA
GAGCAAATTCAAAAGAATATTGAAGCGTTTGAAAAAAAGAACAACCCTTCTATTCAAAAAAAAGCGGCTAAGCACAAAGG
ATTACAAGAATTAAACGAAATTAACGCTCACCCTTTGAATGGCAACCCTAATAGCAATTCTTCCGCTGAAACCAAATCTA
ATAAAGATGATAACTTTGATGAGATGATCAATAAGGTGAATGAAGCTTTTGTAAAACCTGCTGCTCCGCTTGTGCCTGAT
AAATGGAGAACACCTGAAATTGAAATCATTATCAATGAGTGTATTATTTCAAGCAACGATTACGATGGGTTAAGAAAGTG
TTTGATCAAAGGCATCAAGGATCAAAAAATTCTTACCCCCTTATTAGAAAAAATTCAAGAAATAGAGACAGAAAATAACA
AATTTTCTAGACAACACTTGAGTGGTTTAAAACTCGCTCTTAATAACAGCAACAATAGAACCTTTCTTATAGCTTCGTGC
GCGATTTGTGAGAAGAAAAAAAAAGAAATGGAGCAAGAAAATAACTATCAAGATACTACAAATGCAAGTGAGTTTGGAGC
TACTGATACAAAAGAAAATGAAGCAAAAGATGCAGCGTTCTCAAACAATCGCTCTAAATCTGAACTGCCCAATAGCGTCA
TTAATCAAATAGAACAAAGCATCGCTCATGGAAAAAAATAG

Upstream 100 bases:

>100_bases
AAGAACACTACAAGATATTTAATTTCTTCAAAACAGTGGTTTCTGCATACCGAAACAATGTTGCCAAGAATAATCCCTTT
GAATAGGAAAGGAGACACTC

Downstream 100 bases:

>100_bases
CGATCCAAATTATTAGCTCAAGAAACAACTAGAGAAACAAATCCCAAAAATTAGAAATCATAGCCTATCGTCTCAGAAAA
ATCATTTAACAATGATCTTA

Product: cag pathogenicity island protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDEEITKEEKEFATNALREKLRNDRARV
EQIQKNIEAFEKKNNPSIQKKAAKHKGLQELNEINAHPLNGNPNSNSSAETKSNKDDNFDEMINKVNEAFVKPAAPLVPD
KWRTPEIEIIINECIISSNDYDGLRKCLIKGIKDQKILTPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
AICEKKKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQSIAHGKK

Sequences:

>Translated_306_residues
MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDEEITKEEKEFATNALREKLRNDRARV
EQIQKNIEAFEKKNNPSIQKKAAKHKGLQELNEINAHPLNGNPNSNSSAETKSNKDDNFDEMINKVNEAFVKPAAPLVPD
KWRTPEIEIIINECIISSNDYDGLRKCLIKGIKDQKILTPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
AICEKKKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQSIAHGKK
>Mature_306_residues
MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDEEITKEEKEFATNALREKLRNDRARV
EQIQKNIEAFEKKNNPSIQKKAAKHKGLQELNEINAHPLNGNPNSNSSAETKSNKDDNFDEMINKVNEAFVKPAAPLVPD
KWRTPEIEIIINECIISSNDYDGLRKCLIKGIKDQKILTPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
AICEKKKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQSIAHGKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34629; Mature: 34629

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDEEITKE
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EKEFATNALREKLRNDRARVEQIQKNIEAFEKKNNPSIQKKAAKHKGLQELNEINAHPLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GNPNSNSSAETKSNKDDNFDEMINKVNEAFVKPAAPLVPDKWRTPEIEIIINECIISSND
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHCCCC
YDGLRKCLIKGIKDQKILTPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCEEEEEHH
AICEKKKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
HHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHH
IAHGKK
HHCCCC
>Mature Secondary Structure
MKSIFKKLGSVALYSLVVYGGLNAINTALLPSEYKKLVALGFKKIKTFHQRHDDEEITKE
CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EKEFATNALREKLRNDRARVEQIQKNIEAFEKKNNPSIQKKAAKHKGLQELNEINAHPLN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GNPNSNSSAETKSNKDDNFDEMINKVNEAFVKPAAPLVPDKWRTPEIEIIINECIISSND
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHHHHHCCCC
YDGLRKCLIKGIKDQKILTPLLEKIQEIETENNKFSRQHLSGLKLALNNSNNRTFLIASC
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCEEEEEHH
AICEKKKKEMEQENNYQDTTNASEFGATDTKENEAKDAAFSNNRSKSELPNSVINQIEQS
HHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCHHHCCHHHHHHHHHH
IAHGKK
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA