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The map label for this gene is 108562929

Identifier: 108562929

GI number: 108562929

Start: 526176

End: 527747

Strand: Reverse

Name: 108562929

Synonym: HPAG1_0504

Alternate gene names: NA

Gene position: 527747-526176 (Counterclockwise)

Preceding gene: 108562930

Following gene: 108562928

Centisome position: 33.06

GC content: 34.29

Gene sequence:

>1572_bases
TTGATGGGGCAGGCATTTTTTAAAAAAATTGTTGGCTGTTTCTGTCTTGGTTATTTATTTTTATCTAGCACAATAGAAGC
AGCAGCACTTGACATTAAGAATTTTAATCGTGGTAGGGTGAAAGTGGTGAATAAGAAGATTGCTTATTTGGGAGATGAAA
AACCTATTACGATTTGGACTTCATTAGACAATGTTACTGTGATCCAACTTGAAAAAGATGAAACTATTTCTTACATCACA
ACAGGTTTCAATAAAGGTTGGAGTATTGTGCCTAATTCTAATCATATATTCATTCAACCTAAATCGGTAAAAAGTAATCT
CATGTTTGAAAAAGAAGCAGTGAATTTTGCCCTAATGACAAGAGATTACCAAGAATTTTTAAAAACAAAAAAACTTATCG
TAGATGCGCCTGACCCTAAAGAATTAGAAGAACAAAAAAAAGCTCTAGAAAAAGAAAAAGAAGCTAAAGAACAGGCACAA
AAAGCACAAAAAGATAAAAGAGAAAAAAGAAAAGAAGAGCGTGCAAAAAATAGAGCCAATTTAGAAAATCTCACTAACGC
TATGAGTAACCCACAAAATTTGAGCAATAACAAAAATCTTAGCGAATTTATCAAGCAACAGCGAGAAAATGAATTAGACC
AAATGGAACGACTAGAGGACATGCAAGAACAGGCTCAAGCTAATGCGCTCAAACAAATTGAAGAACTCAACAAGAAACAA
GCTGAAGAGACAATCAAGCAAAGAGCCAAGGATAAAATTAGTATTAAGACAGATAAACCTCAAAAAAGCCCTGAGGATAA
CTCCATAGAATTATCTCCTAGCGATAGCGCTTGGAGAACTAATCTTGTTGTGCGAACTAATAAAGCCTTGTATCAATTCA
TTTTGAGGATAGCTCAAAAAGACAATTTTGCTTCAGCGTATCTAACAGTCAAATTAGAATACCCACAAAGACACGAAGTT
TCTAGCGTTATTGAAGAGGAATTAAAAAAGAGAGAAGAAGCAAAGAGACAGAGAGAATTGATTAAGCAAGAAAATCTTAA
CACCACAGCCTACATCAATAGAGTAATGATGGCGAGCAATGAACAGATTATCAACAAAGAAAAAATAAGAGAAGAAAAAC
AAAAAATTATATTAGATCAAGCAAAGGCGCTAGAGACTCAATATGTGCATAATGCCTTAAAAAGAAACCCCGTGCCTAGA
AACTACAATTACTACCAAGCGCCTGAAAAACGCTCTAAACATATTATGCCCTCTGAAATTTTTGATGATGGCACATTCAC
TTATTTTGGTTTCAAAAACATCACTCTCCAACCTGCTATTTTTGTGGTTCAACCTGATGGGAAATTGAGCATGACTGATG
CTGCCATTGATCCTAACATGACCAATTTAGGATTGAGATGGTATAGAGTTAATGAAATTGCAGAAAAGTTTAAGCTCATT
AAAGACAAAGCCCTTGTAACAGTAATCAATAAAGGCTATGGGAAAAATCCATTGACAAAAAATTACAATATCAAAAACTA
TGGTGAATTGGAGCGCGTGATTAAAAAGCTCCCTCTTGTCAGAGATAAATAA

Upstream 100 bases:

>100_bases
AGAGATGCCTTAATGGTTGGAAGAGTTGGTGGATCTATATTTAAAGGATAAGCCACTTTATTCTTGTGCTAAAATTACAA
ATATTTTTTAAGAGGAATTG

Downstream 100 bases:

>100_bases
AAAGGCGTTAAGACATGAATGAAGAAAACGATAAACTTGAAACTTCTAAAAAAACCCAACAACATTCACCCCAAGATTTA
TCTAATGAAGAAGCGACAGA

Product: cag pathogenicity island protein X

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MMGQAFFKKIVGCFCLGYLFLSSTIEAAALDIKNFNRGRVKVVNKKIAYLGDEKPITIWTSLDNVTVIQLEKDETISYIT
TGFNKGWSIVPNSNHIFIQPKSVKSNLMFEKEAVNFALMTRDYQEFLKTKKLIVDAPDPKELEEQKKALEKEKEAKEQAQ
KAQKDKREKRKEERAKNRANLENLTNAMSNPQNLSNNKNLSEFIKQQRENELDQMERLEDMQEQAQANALKQIEELNKKQ
AEETIKQRAKDKISIKTDKPQKSPEDNSIELSPSDSAWRTNLVVRTNKALYQFILRIAQKDNFASAYLTVKLEYPQRHEV
SSVIEEELKKREEAKRQRELIKQENLNTTAYINRVMMASNEQIINKEKIREEKQKIILDQAKALETQYVHNALKRNPVPR
NYNYYQAPEKRSKHIMPSEIFDDGTFTYFGFKNITLQPAIFVVQPDGKLSMTDAAIDPNMTNLGLRWYRVNEIAEKFKLI
KDKALVTVINKGYGKNPLTKNYNIKNYGELERVIKKLPLVRDK

Sequences:

>Translated_523_residues
MMGQAFFKKIVGCFCLGYLFLSSTIEAAALDIKNFNRGRVKVVNKKIAYLGDEKPITIWTSLDNVTVIQLEKDETISYIT
TGFNKGWSIVPNSNHIFIQPKSVKSNLMFEKEAVNFALMTRDYQEFLKTKKLIVDAPDPKELEEQKKALEKEKEAKEQAQ
KAQKDKREKRKEERAKNRANLENLTNAMSNPQNLSNNKNLSEFIKQQRENELDQMERLEDMQEQAQANALKQIEELNKKQ
AEETIKQRAKDKISIKTDKPQKSPEDNSIELSPSDSAWRTNLVVRTNKALYQFILRIAQKDNFASAYLTVKLEYPQRHEV
SSVIEEELKKREEAKRQRELIKQENLNTTAYINRVMMASNEQIINKEKIREEKQKIILDQAKALETQYVHNALKRNPVPR
NYNYYQAPEKRSKHIMPSEIFDDGTFTYFGFKNITLQPAIFVVQPDGKLSMTDAAIDPNMTNLGLRWYRVNEIAEKFKLI
KDKALVTVINKGYGKNPLTKNYNIKNYGELERVIKKLPLVRDK
>Mature_523_residues
MMGQAFFKKIVGCFCLGYLFLSSTIEAAALDIKNFNRGRVKVVNKKIAYLGDEKPITIWTSLDNVTVIQLEKDETISYIT
TGFNKGWSIVPNSNHIFIQPKSVKSNLMFEKEAVNFALMTRDYQEFLKTKKLIVDAPDPKELEEQKKALEKEKEAKEQAQ
KAQKDKREKRKEERAKNRANLENLTNAMSNPQNLSNNKNLSEFIKQQRENELDQMERLEDMQEQAQANALKQIEELNKKQ
AEETIKQRAKDKISIKTDKPQKSPEDNSIELSPSDSAWRTNLVVRTNKALYQFILRIAQKDNFASAYLTVKLEYPQRHEV
SSVIEEELKKREEAKRQRELIKQENLNTTAYINRVMMASNEQIINKEKIREEKQKIILDQAKALETQYVHNALKRNPVPR
NYNYYQAPEKRSKHIMPSEIFDDGTFTYFGFKNITLQPAIFVVQPDGKLSMTDAAIDPNMTNLGLRWYRVNEIAEKFKLI
KDKALVTVINKGYGKNPLTKNYNIKNYGELERVIKKLPLVRDK

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60814; Mature: 60814

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMGQAFFKKIVGCFCLGYLFLSSTIEAAALDIKNFNRGRVKVVNKKIAYLGDEKPITIWT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCEEEEE
SLDNVTVIQLEKDETISYITTGFNKGWSIVPNSNHIFIQPKSVKSNLMFEKEAVNFALMT
ECCCEEEEEEECCCCEEHEECCCCCCCEECCCCCEEEEECHHHHHHHEEHHHHHHHHHHH
RDYQEFLKTKKLIVDAPDPKELEEQKKALEKEKEAKEQAQKAQKDKREKRKEERAKNRAN
HHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LENLTNAMSNPQNLSNNKNLSEFIKQQRENELDQMERLEDMQEQAQANALKQIEELNKKQ
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEETIKQRAKDKISIKTDKPQKSPEDNSIELSPSDSAWRTNLVVRTNKALYQFILRIAQK
HHHHHHHHHCCCEEEECCCCCCCCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHHHC
DNFASAYLTVKLEYPQRHEVSSVIEEELKKREEAKRQRELIKQENLNTTAYINRVMMASN
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
EQIINKEKIREEKQKIILDQAKALETQYVHNALKRNPVPRNYNYYQAPEKRSKHIMPSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHH
FDDGTFTYFGFKNITLQPAIFVVQPDGKLSMTDAAIDPNMTNLGLRWYRVNEIAEKFKLI
CCCCCEEEEECCCEEECCEEEEECCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHH
KDKALVTVINKGYGKNPLTKNYNIKNYGELERVIKKLPLVRDK
HHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMGQAFFKKIVGCFCLGYLFLSSTIEAAALDIKNFNRGRVKVVNKKIAYLGDEKPITIWT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCCCCCCEEEEE
SLDNVTVIQLEKDETISYITTGFNKGWSIVPNSNHIFIQPKSVKSNLMFEKEAVNFALMT
ECCCEEEEEEECCCCEEHEECCCCCCCEECCCCCEEEEECHHHHHHHEEHHHHHHHHHHH
RDYQEFLKTKKLIVDAPDPKELEEQKKALEKEKEAKEQAQKAQKDKREKRKEERAKNRAN
HHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LENLTNAMSNPQNLSNNKNLSEFIKQQRENELDQMERLEDMQEQAQANALKQIEELNKKQ
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEETIKQRAKDKISIKTDKPQKSPEDNSIELSPSDSAWRTNLVVRTNKALYQFILRIAQK
HHHHHHHHHCCCEEEECCCCCCCCCCCCEEECCCCCCCEEEEEEECCHHHHHHHHHHHHC
DNFASAYLTVKLEYPQRHEVSSVIEEELKKREEAKRQRELIKQENLNTTAYINRVMMASN
CCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
EQIINKEKIREEKQKIILDQAKALETQYVHNALKRNPVPRNYNYYQAPEKRSKHIMPSEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCHHH
FDDGTFTYFGFKNITLQPAIFVVQPDGKLSMTDAAIDPNMTNLGLRWYRVNEIAEKFKLI
CCCCCEEEEECCCEEECCEEEEECCCCCEEEECCCCCCCCCCCCEEEEEHHHHHHHHHHH
KDKALVTVINKGYGKNPLTKNYNIKNYGELERVIKKLPLVRDK
HHHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA